RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 TRILQ7L0X0 811 aa5.22□□□□□ -1.57
VPS50-220ENST00000544910 P4HA3Q7Z4N8 544 aa5.22□□□□□ -1.57
VPS50-220ENST00000544910 SLC22A18ASQ8N1D0 253 aa5.22□□□□□ -1.57
VPS50-220ENST00000544910 KDM8Q8N371 416 aa5.22□□□□□ -1.57
VPS50-220ENST00000544910 FAM71CQ8NEG0 241 aa5.22□□□□□ -1.57
VPS50-220ENST00000544910 OR10R2Q8NGX6 335 aa5.22□□□□□ -1.57
VPS50-220ENST00000544910 C14orf79Q96F83 325 aa5.22□□□□□ -1.57
VPS50-220ENST00000544910 TMEM59Q9BXS4 323 aa5.22□□□□□ -1.57
VPS50-220ENST00000544910 CHRDQ9H2X0 955 aa5.22□□□□□ -1.57
VPS50-220ENST00000544910 PLEK2Q9NYT0 353 aa5.22□□□□□ -1.57
VPS50-220ENST00000544910 TAS2R5Q9NYW4 299 aa5.22□□□□□ -1.57
VPS50-220ENST00000544910 ING1Q9UK53 422 aaPredicted RBP5.22□□□□□ -1.57
VPS50-220ENST00000544910 LRP12Q9Y561 859 aa5.22□□□□□ -1.57
VPS50-220ENST00000544910 TMEM272A0A1B0GTI8 110 aa5.22□□□□□ -1.57
VPS50-220ENST00000544910 LOC102725191A0A1B0GVB3 256 aa5.22□□□□□ -1.57
VPS50-220ENST00000544910 LMO7DNF2Z398 122 aa5.22□□□□□ -1.57
VPS50-220ENST00000544910 EPPINO95925 133 aa5.22□□□□□ -1.57
VPS50-220ENST00000544910 KNG1P01042 644 aa5.22□□□□□ -1.57
VPS50-220ENST00000544910 LCATP04180 440 aa5.22□□□□□ -1.57
VPS50-220ENST00000544910 IL5P05113 134 aa5.22□□□□□ -1.57
VPS50-220ENST00000544910 CD63P08962 238 aa5.22□□□□□ -1.57
VPS50-220ENST00000544910 FCGR2AP12318 317 aa5.22□□□□□ -1.57
VPS50-220ENST00000544910 POU3F2P20265 443 aaPredicted RBP5.22□□□□□ -1.57
VPS50-220ENST00000544910 ABCD3P28288 659 aa5.22□□□□□ -1.57
VPS50-220ENST00000544910 TLE4Q04727 773 aa5.22□□□□□ -1.57
VPS50-220ENST00000544910 FUT7Q11130 342 aa5.22□□□□□ -1.57
VPS50-220ENST00000544910 SKP2Q13309 424 aa5.22□□□□□ -1.57
VPS50-220ENST00000544910 WDR38Q5JTN6 314 aa5.22□□□□□ -1.57
VPS50-220ENST00000544910 PRAMEF20Q5VT98 475 aa5.22□□□□□ -1.57
VPS50-220ENST00000544910 MAMSTRQ6ZN01 415 aa5.22□□□□□ -1.57
VPS50-220ENST00000544910 TMEM229BQ8NBD8 167 aa5.22□□□□□ -1.57
VPS50-220ENST00000544910 YIPF5Q969M3 257 aa5.22□□□□□ -1.57
VPS50-220ENST00000544910 BORCS8Q96FH0 119 aa5.22□□□□□ -1.57
VPS50-220ENST00000544910 LDAHQ9H6V9 325 aa5.22□□□□□ -1.57
VPS50-220ENST00000544910 OR5V1Q9UGF6 321 aa5.22□□□□□ -1.57
VPS50-220ENST00000544910 SIRT4Q9Y6E7 314 aaPredicted RBP5.22□□□□□ -1.57
VPS50-220ENST00000544910 A0A1W2PQD3 144 aa5.22□□□□□ -1.57
VPS50-220ENST00000544910 K7EPK0 472 aa5.22□□□□□ -1.57
VPS50-220ENST00000544910 ZFPL1O95159 310 aa5.22□□□□□ -1.57
VPS50-220ENST00000544910 FKBP2P26885 142 aaKnown RBP5.22□□□□□ -1.57
VPS50-220ENST00000544910 LAP3P28838 519 aa5.22□□□□□ -1.57
VPS50-220ENST00000544910 CAV2P51636 162 aa5.22□□□□□ -1.57
VPS50-220ENST00000544910 EXOSC2Q13868 293 aaKnown RBP5.22□□□□□ -1.57
VPS50-220ENST00000544910 EXT1Q16394 746 aa5.22□□□□□ -1.57
VPS50-220ENST00000544910 ISXQ2M1V0 245 aa5.22□□□□□ -1.57
VPS50-220ENST00000544910 COL13A1Q5TAT6 717 aaPredicted RBP5.22□□□□□ -1.57
VPS50-220ENST00000544910 GLIPR1L1Q6UWM5 242 aa5.22□□□□□ -1.57
VPS50-220ENST00000544910 DOK3Q7L591 496 aa5.22□□□□□ -1.57
VPS50-220ENST00000544910 LILRB2Q8N423 598 aa5.22□□□□□ -1.57
VPS50-220ENST00000544910 FAM71E2Q8N5Q1 922 aa5.22□□□□□ -1.57
VPS50-220ENST00000544910 OR4C16Q8NGL9 310 aa5.22□□□□□ -1.57
VPS50-220ENST00000544910 STT3BQ8TCJ2 826 aa5.22□□□□□ -1.57
VPS50-220ENST00000544910 SLC25A43Q8WUT9 341 aaPredicted RBP5.22□□□□□ -1.57
VPS50-220ENST00000544910 PCNPQ8WW12 178 aaKnown RBP5.22□□□□□ -1.57
VPS50-220ENST00000544910 NINJ1Q92982 152 aa5.22□□□□□ -1.57
VPS50-220ENST00000544910 MRGPRX4Q96LA9 322 aa5.22□□□□□ -1.57
VPS50-220ENST00000544910 ABHD1Q96SE0 405 aa5.22□□□□□ -1.57
VPS50-220ENST00000544910 SDHCQ99643 169 aaPredicted RBP5.22□□□□□ -1.57
VPS50-220ENST00000544910 PBOV1Q9GZY1 135 aa5.22□□□□□ -1.57
VPS50-220ENST00000544910 METTL9Q9H1A3 318 aa5.22□□□□□ -1.57
VPS50-220ENST00000544910 EHFQ9NZC4 300 aa5.22□□□□□ -1.57
VPS50-220ENST00000544910 MRM2Q9UI43 246 aaKnown RBP5.22□□□□□ -1.57
VPS50-220ENST00000544910 FBXL2Q9UKC9 423 aa5.22□□□□□ -1.57
VPS50-220ENST00000544910 DTX4Q9Y2E6 619 aa5.22□□□□□ -1.57
VPS50-220ENST00000544910 NSG1A0A0A6YYJ2 146 aa5.22□□□□□ -1.57
VPS50-220ENST00000544910 ANKRD20A5PA0PJZ0 165 aa5.22□□□□□ -1.57
VPS50-220ENST00000544910 GPR137BO60478 399 aa5.22□□□□□ -1.57
VPS50-220ENST00000544910 IGHV4-34P06331 123 aa5.22□□□□□ -1.57
VPS50-220ENST00000544910 NKAIN1Q4KMZ8 207 aa5.22□□□□□ -1.57
VPS50-220ENST00000544910 CPEB2Q7Z5Q1 589 aaKnown RBP5.22□□□□□ -1.57
VPS50-220ENST00000544910 ADGRG3Q86Y34 549 aa5.22□□□□□ -1.57
VPS50-220ENST00000544910 ZFP82Q8N141 532 aa5.22□□□□□ -1.57
VPS50-220ENST00000544910 CARFQ8N187 725 aa5.22□□□□□ -1.57
VPS50-220ENST00000544910 RFLNBQ8N5W9 214 aa5.22□□□□□ -1.57
VPS50-220ENST00000544910 NOXO1Q8NFA2 376 aa5.22□□□□□ -1.57
VPS50-220ENST00000544910 NANPQ8TBE9 248 aa5.22□□□□□ -1.57
VPS50-220ENST00000544910 ST8SIA2Q92186 375 aa5.22□□□□□ -1.57
VPS50-220ENST00000544910 MOGAT1Q96PD6 335 aa5.22□□□□□ -1.57
VPS50-220ENST00000544910 PIGQQ9BRB3 760 aa5.22□□□□□ -1.57
VPS50-220ENST00000544910 NIPSNAP3BQ9BS92 247 aa5.22□□□□□ -1.57
VPS50-220ENST00000544910 ULBP2Q9BZM5 246 aa5.22□□□□□ -1.57
VPS50-220ENST00000544910 ZNF442Q9H7R0 627 aa5.22□□□□□ -1.57
VPS50-220ENST00000544910 TMEM100Q9NV29 134 aa5.22□□□□□ -1.57
VPS50-220ENST00000544910 KLHL13Q9P2N7 655 aa5.22□□□□□ -1.57
VPS50-220ENST00000544910 SIT1Q9Y3P8 196 aa5.22□□□□□ -1.57
VPS50-220ENST00000544910 A0A1B0GV50 99 aa5.21□□□□□ -1.57
VPS50-220ENST00000544910 C20orf202A1L168 122 aa5.21□□□□□ -1.57
VPS50-220ENST00000544910 TAAR5O14804 337 aa5.21□□□□□ -1.57
VPS50-220ENST00000544910 EIF1BO60739 113 aaKnown RBP5.21□□□□□ -1.57
VPS50-220ENST00000544910 HLA-DQB1P01920 261 aa5.21□□□□□ -1.57
VPS50-220ENST00000544910 ADRA2AP08913 450 aa5.21□□□□□ -1.57
VPS50-220ENST00000544910 MAP2K6P52564 334 aa5.21□□□□□ -1.57
VPS50-220ENST00000544910 GPR85P60893 370 aa5.21□□□□□ -1.57
VPS50-220ENST00000544910 RPL23AP62750 156 aaKnown RBP5.21□□□□□ -1.57
VPS50-220ENST00000544910 RPS15P62841 145 aaKnown RBP5.21□□□□□ -1.57
VPS50-220ENST00000544910 FOXF1Q12946 379 aa5.21□□□□□ -1.57
VPS50-220ENST00000544910 KLF9Q13886 244 aaPredicted RBP5.21□□□□□ -1.57
VPS50-220ENST00000544910 CD226Q15762 336 aa5.21□□□□□ -1.57
VPS50-220ENST00000544910 SLC36A2Q495M3 483 aa5.21□□□□□ -1.57
VPS50-220ENST00000544910 RBMS3Q6XE24 437 aaKnown RBP5.21□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms