RNA–Protein interactions for RNA: ENST00000544750.1

USP28-212, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-212ENST00000544750 CLDN22Q8N7P3 220 aa10.67□□□□□ -0.7
USP28-212ENST00000544750 DYRK2Q92630 601 aa10.67□□□□□ -0.7
USP28-212ENST00000544750 CMBLQ96DG6 245 aa10.67□□□□□ -0.7
USP28-212ENST00000544750 C7orf34Q96L11 122 aa10.67□□□□□ -0.7
USP28-212ENST00000544750 ALG12Q9BV10 488 aa10.67□□□□□ -0.7
USP28-212ENST00000544750 TXNIPQ9H3M7 391 aa10.67□□□□□ -0.7
USP28-212ENST00000544750 ASH2LQ9UBL3 628 aa10.67□□□□□ -0.7
USP28-212ENST00000544750 RPS6KA6Q9UK32 745 aa10.67□□□□□ -0.7
USP28-212ENST00000544750 NDRG4Q9ULP0 352 aaKnown RBP10.67□□□□□ -0.7
USP28-212ENST00000544750 STARD10Q9Y365 291 aa10.67□□□□□ -0.7
USP28-212ENST00000544750 ENPP4Q9Y6X5 453 aa10.67□□□□□ -0.7
USP28-212ENST00000544750 B2RBV5 119 aa10.66□□□□□ -0.7
USP28-212ENST00000544750 C22orf46C9J442 243 aa10.66□□□□□ -0.7
USP28-212ENST00000544750 H0YL77 283 aa10.66□□□□□ -0.7
USP28-212ENST00000544750 ALX3O95076 343 aa10.66□□□□□ -0.7
USP28-212ENST00000544750 CYB5R3P00387 301 aaPredicted RBP10.66□□□□□ -0.7
USP28-212ENST00000544750 NR2C1P13056 603 aa10.66□□□□□ -0.7
USP28-212ENST00000544750 MMP9P14780 707 aa10.66□□□□□ -0.7
USP28-212ENST00000544750 PCBD1P61457 104 aa10.66□□□□□ -0.7
USP28-212ENST00000544750 CD47Q08722 323 aa10.66□□□□□ -0.7
USP28-212ENST00000544750 FHL1Q13642 323 aa10.66□□□□□ -0.7
USP28-212ENST00000544750 LAPTM4AQ15012 233 aa10.66□□□□□ -0.7
USP28-212ENST00000544750 KPRPQ5T749 579 aaPredicted RBP10.66□□□□□ -0.7
USP28-212ENST00000544750 GPR157Q5UAW9 335 aa10.66□□□□□ -0.7
USP28-212ENST00000544750 WDR25Q64LD2 544 aaPredicted RBP10.66□□□□□ -0.7
USP28-212ENST00000544750 ARL9Q6T311 187 aa10.66□□□□□ -0.7
USP28-212ENST00000544750 FKBP9P1Q75LS8 142 aa10.66□□□□□ -0.7
USP28-212ENST00000544750 SGTBQ96EQ0 304 aa10.66□□□□□ -0.7
USP28-212ENST00000544750 NSL1Q96IY1 281 aa10.66□□□□□ -0.7
USP28-212ENST00000544750 PLEKHA8Q96JA3 519 aa10.66□□□□□ -0.7
USP28-212ENST00000544750 MEGF10Q96KG7 1140 aa10.66□□□□□ -0.7
USP28-212ENST00000544750 CDADC1Q9BWV3 514 aa10.66□□□□□ -0.7
USP28-212ENST00000544750 NDE1Q9NXR1 346 aa10.66□□□□□ -0.7
USP28-212ENST00000544750 NDUFAF4Q9P032 175 aa10.66□□□□□ -0.7
USP28-212ENST00000544750 MAGEL2Q9UJ55 1249 aa10.66□□□□□ -0.7
USP28-212ENST00000544750 MED31Q9Y3C7 131 aa10.66□□□□□ -0.7
USP28-212ENST00000544750 A0A087WUU8 490 aa10.65□□□□□ -0.7
USP28-212ENST00000544750 CENPVL3A0A0U1RRI6 287 aa10.65□□□□□ -0.7
USP28-212ENST00000544750 PHYHO14832 338 aa10.65□□□□□ -0.7
USP28-212ENST00000544750 GPR137BO60478 399 aa10.65□□□□□ -0.7
USP28-212ENST00000544750 ATP6V1B2P21281 511 aa10.65□□□□□ -0.7
USP28-212ENST00000544750 CALB2P22676 271 aa10.65□□□□□ -0.7
USP28-212ENST00000544750 PMELP40967 661 aa10.65□□□□□ -0.7
USP28-212ENST00000544750 PITPNBP48739 271 aa10.65□□□□□ -0.7
USP28-212ENST00000544750 MXRA7P84157 204 aa10.65□□□□□ -0.7
USP28-212ENST00000544750 TRAM2Q15035 370 aa10.65□□□□□ -0.7
USP28-212ENST00000544750 SPATS1Q496A3 300 aa10.65□□□□□ -0.7
USP28-212ENST00000544750 FAM201AQ5SY85 155 aa10.65□□□□□ -0.7
USP28-212ENST00000544750 TBPL2Q6SJ96 375 aa10.65□□□□□ -0.7
USP28-212ENST00000544750 LYPD2Q6UXB3 125 aa10.65□□□□□ -0.7
USP28-212ENST00000544750 Q6ZPA2 131 aa10.65□□□□□ -0.7
USP28-212ENST00000544750 ZSCAN4Q8NAM6 433 aaPredicted RBP10.65□□□□□ -0.7
USP28-212ENST00000544750 OR8B3Q8NGG8 313 aa10.65□□□□□ -0.7
USP28-212ENST00000544750 BCAS4Q8TDM0 211 aa10.65□□□□□ -0.7
USP28-212ENST00000544750 SSMEM1Q8WWF3 244 aa10.65□□□□□ -0.7
USP28-212ENST00000544750 PTP4A1Q93096 173 aa10.65□□□□□ -0.7
USP28-212ENST00000544750 DHRS1Q96LJ7 313 aa10.65□□□□□ -0.7
USP28-212ENST00000544750 OR8B2Q96RD0 313 aa10.65□□□□□ -0.7
USP28-212ENST00000544750 TBX15Q96SF7 602 aa10.65□□□□□ -0.7
USP28-212ENST00000544750 SLC30A2Q9BRI3 323 aa10.65□□□□□ -0.7
USP28-212ENST00000544750 FUZQ9BT04 418 aa10.65□□□□□ -0.7
USP28-212ENST00000544750 WACQ9BTA9 647 aa10.65□□□□□ -0.7
USP28-212ENST00000544750 FNDC11Q9BVV2 318 aa10.65□□□□□ -0.7
USP28-212ENST00000544750 NMNAT1Q9HAN9 279 aaPredicted RBP10.65□□□□□ -0.7
USP28-212ENST00000544750 TCF7L1Q9HCS4 588 aa10.65□□□□□ -0.7
USP28-212ENST00000544750 CLN8Q9UBY8 286 aa10.65□□□□□ -0.7
USP28-212ENST00000544750 SAMD4AQ9UPU9 718 aaKnown RBP10.65□□□□□ -0.7
USP28-212ENST00000544750 HIF3AQ9Y2N7 669 aa10.65□□□□□ -0.7
USP28-212ENST00000544750 V9GYQ6 96 aa10.65□□□□□ -0.7
USP28-212ENST00000544750 A0A1B0GWJ7 208 aa10.64□□□□□ -0.71
USP28-212ENST00000544750 C5orf63A6NC05 138 aa10.64□□□□□ -0.71
USP28-212ENST00000544750 MLNRO43193 412 aa10.64□□□□□ -0.71
USP28-212ENST00000544750 DIRAS1O95057 198 aa10.64□□□□□ -0.71
USP28-212ENST00000544750 SFTPBP07988 381 aa10.64□□□□□ -0.71
USP28-212ENST00000544750 IFI30P13284 250 aa10.64□□□□□ -0.71
USP28-212ENST00000544750 RAC2P15153 192 aa10.64□□□□□ -0.71
USP28-212ENST00000544750 MSR1P21757 451 aa10.64□□□□□ -0.71
USP28-212ENST00000544750 CFHR2P36980 270 aa10.64□□□□□ -0.71
USP28-212ENST00000544750 PSMB10P40306 273 aa10.64□□□□□ -0.71
USP28-212ENST00000544750 MNAT1P51948 309 aa10.64□□□□□ -0.71
USP28-212ENST00000544750 PRKCDQ05655 676 aa10.64□□□□□ -0.71
USP28-212ENST00000544750 Q6ZSV7 163 aa10.64□□□□□ -0.71
USP28-212ENST00000544750 NRMQ8IXM6 262 aa10.64□□□□□ -0.71
USP28-212ENST00000544750 LRRC75AQ8NAA5 344 aa10.64□□□□□ -0.71
USP28-212ENST00000544750 OR10AD1Q8NGE0 317 aa10.64□□□□□ -0.71
USP28-212ENST00000544750 FAM110DQ8TAY7 271 aaPredicted RBP10.64□□□□□ -0.71
USP28-212ENST00000544750 FNDC8Q8TC99 324 aa10.64□□□□□ -0.71
USP28-212ENST00000544750 SLC7A13Q8TCU3 470 aa10.64□□□□□ -0.71
USP28-212ENST00000544750 ACOT11Q8WXI4 607 aaPredicted RBP10.64□□□□□ -0.71
USP28-212ENST00000544750 BPIFA2Q96DR5 249 aa10.64□□□□□ -0.71
USP28-212ENST00000544750 RBP7Q96R05 134 aa10.64□□□□□ -0.71
USP28-212ENST00000544750 ANKRD19PQ9H560 264 aa10.64□□□□□ -0.71
USP28-212ENST00000544750 C16orf95Q9H693 158 aa10.64□□□□□ -0.71
USP28-212ENST00000544750 POLE4Q9NR33 117 aa10.64□□□□□ -0.71
USP28-212ENST00000544750 TAS2R1Q9NYW7 299 aa10.64□□□□□ -0.71
USP28-212ENST00000544750 NOTCH3Q9UM47 2321 aa10.64□□□□□ -0.71
USP28-212ENST00000544750 A0A1W2PRQ8 180 aa10.63□□□□□ -0.71
USP28-212ENST00000544750 C12orf71A8MTZ7 269 aa10.63□□□□□ -0.71
USP28-212ENST00000544750 G3V4G9 280 aa10.63□□□□□ -0.71
USP28-212ENST00000544750 P2RY10O00398 339 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms