RNA–Protein interactions for RNA: ENST00000544504.5

YBX3-215, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-215ENST00000544504 MAP6Q96JE9 813 aa8.31□□□□□ -1.08
YBX3-215ENST00000544504 OR5M11Q96RB7 305 aa8.31□□□□□ -1.08
YBX3-215ENST00000544504 DCLRE1CQ96SD1 692 aaKnown RBP8.31□□□□□ -1.08
YBX3-215ENST00000544504 KCNJ15Q99712 375 aa8.31□□□□□ -1.08
YBX3-215ENST00000544504 COQ7Q99807 217 aa8.31□□□□□ -1.08
YBX3-215ENST00000544504 REPIN1Q9BWE0 567 aaKnown RBP8.31□□□□□ -1.08
YBX3-215ENST00000544504 OR2H1Q9GZK4 316 aa8.31□□□□□ -1.08
YBX3-215ENST00000544504 CXXC4Q9H2H0 198 aa8.31□□□□□ -1.08
YBX3-215ENST00000544504 MOB1AQ9H8S9 216 aa8.31□□□□□ -1.08
YBX3-215ENST00000544504 ELOVL3Q9HB03 270 aa8.31□□□□□ -1.08
YBX3-215ENST00000544504 SLCO1C1Q9NYB5 712 aa8.31□□□□□ -1.08
YBX3-215ENST00000544504 JKAMPQ9P055 326 aa8.31□□□□□ -1.08
YBX3-215ENST00000544504 MRM2Q9UI43 246 aaKnown RBP8.31□□□□□ -1.08
YBX3-215ENST00000544504 KLHDC2Q9Y2U9 406 aa8.31□□□□□ -1.08
YBX3-215ENST00000544504 INTS1Q8N201 2190 aaKnown RBP8.3□□□□□ -1.08
YBX3-215ENST00000544504 LOC110117498-PIK3R3F6TDL0 507 aa8.3□□□□□ -1.08
YBX3-215ENST00000544504 RER1O15258 196 aa8.3□□□□□ -1.08
YBX3-215ENST00000544504 OGG1O15527 345 aa8.3□□□□□ -1.08
YBX3-215ENST00000544504 RAD51DO75771 328 aa8.3□□□□□ -1.08
YBX3-215ENST00000544504 LYZL6O75951 148 aa8.3□□□□□ -1.08
YBX3-215ENST00000544504 INMTO95050 263 aa8.3□□□□□ -1.08
YBX3-215ENST00000544504 ADRA2AP08913 450 aa8.3□□□□□ -1.08
YBX3-215ENST00000544504 MMP7P09237 267 aaPredicted RBP8.3□□□□□ -1.08
YBX3-215ENST00000544504 CD79AP11912 226 aa8.3□□□□□ -1.08
YBX3-215ENST00000544504 PPP3CBP16298 524 aa8.3□□□□□ -1.08
YBX3-215ENST00000544504 CPEP16870 476 aa8.3□□□□□ -1.08
YBX3-215ENST00000544504 CD79BP40259 229 aa8.3□□□□□ -1.08
YBX3-215ENST00000544504 RPS27P42677 84 aaKnown RBP8.3□□□□□ -1.08
YBX3-215ENST00000544504 MMP16P51512 607 aa8.3□□□□□ -1.08
YBX3-215ENST00000544504 CCR9P51686 369 aa8.3□□□□□ -1.08
YBX3-215ENST00000544504 TPTEP56180 551 aa8.3□□□□□ -1.08
YBX3-215ENST00000544504 PSMA6P60900 246 aaKnown RBP8.3□□□□□ -1.08
YBX3-215ENST00000544504 RAB1AP62820 205 aa8.3□□□□□ -1.08
YBX3-215ENST00000544504 RAB39AQ14964 217 aa8.3□□□□□ -1.08
YBX3-215ENST00000544504 CDSNQ15517 529 aa8.3□□□□□ -1.08
YBX3-215ENST00000544504 FBXL19-AS1Q494R0 122 aa8.3□□□□□ -1.08
YBX3-215ENST00000544504 TIMM23BQ5SRD1 257 aa8.3□□□□□ -1.08
YBX3-215ENST00000544504 LIPNQ5VXI9 398 aa8.3□□□□□ -1.08
YBX3-215ENST00000544504 CORO6Q6QEF8 472 aa8.3□□□□□ -1.08
YBX3-215ENST00000544504 ARL9Q6T311 187 aa8.3□□□□□ -1.08
YBX3-215ENST00000544504 LRRN1Q6UXK5 716 aa8.3□□□□□ -1.08
YBX3-215ENST00000544504 MEX3BQ6ZN04 569 aaKnown RBP8.3□□□□□ -1.08
YBX3-215ENST00000544504 ZNF704Q6ZNC4 412 aaPredicted RBP8.3□□□□□ -1.08
YBX3-215ENST00000544504 SSX6Q7RTT6 188 aa8.3□□□□□ -1.08
YBX3-215ENST00000544504 LUZP2Q86TE4 346 aa8.3□□□□□ -1.08
YBX3-215ENST00000544504 CXorf67Q86X51 503 aaPredicted RBP8.3□□□□□ -1.08
YBX3-215ENST00000544504 MS4A15Q8N5U1 240 aa8.3□□□□□ -1.08
YBX3-215ENST00000544504 FAM169BQ8N8A8 192 aa8.3□□□□□ -1.08
YBX3-215ENST00000544504 OR1J2Q8NGS2 313 aa8.3□□□□□ -1.08
YBX3-215ENST00000544504 OR13F1Q8NGS4 319 aa8.3□□□□□ -1.08
YBX3-215ENST00000544504 OR1F12Q8NHA8 337 aa8.3□□□□□ -1.08
YBX3-215ENST00000544504 SMAP2Q8WU79 429 aaPredicted RBP8.3□□□□□ -1.08
YBX3-215ENST00000544504 ITFG2Q969R8 447 aa8.3□□□□□ -1.08
YBX3-215ENST00000544504 PELI1Q96FA3 418 aa8.3□□□□□ -1.08
YBX3-215ENST00000544504 FOXC2Q99958 501 aa8.3□□□□□ -1.08
YBX3-215ENST00000544504 BCL7BQ9BQE9 202 aa8.3□□□□□ -1.08
YBX3-215ENST00000544504 FAM192AQ9GZU8 254 aa8.3□□□□□ -1.08
YBX3-215ENST00000544504 COMMD4Q9H0A8 199 aa8.3□□□□□ -1.08
YBX3-215ENST00000544504 ISG20L2Q9H9L3 353 aaKnown RBP8.3□□□□□ -1.08
YBX3-215ENST00000544504 SLC17A5Q9NRA2 495 aa8.3□□□□□ -1.08
YBX3-215ENST00000544504 ACOXLQ9NUZ1 547 aa8.3□□□□□ -1.08
YBX3-215ENST00000544504 LRP12Q9Y561 859 aa8.3□□□□□ -1.08
YBX3-215ENST00000544504 R4GMQ9 66 aa8.3□□□□□ -1.08
YBX3-215ENST00000544504 A0A096LPE4 126 aa8.29□□□□□ -1.08
YBX3-215ENST00000544504 TRBV2A0A0J9YWF9 115 aa8.29□□□□□ -1.08
YBX3-215ENST00000544504 TMEM269A0A1B0GVZ9 245 aa8.29□□□□□ -1.08
YBX3-215ENST00000544504 A0A1W2PPZ6 126 aa8.29□□□□□ -1.08
YBX3-215ENST00000544504 OR5H1A6NKK0 313 aa8.29□□□□□ -1.08
YBX3-215ENST00000544504 TMEM212A6NML5 194 aa8.29□□□□□ -1.08
YBX3-215ENST00000544504 C16orf97H3BN30 126 aa8.29□□□□□ -1.08
YBX3-215ENST00000544504 J3QW42 95 aa8.29□□□□□ -1.08
YBX3-215ENST00000544504 PLPP2O43688 288 aa8.29□□□□□ -1.08
YBX3-215ENST00000544504 SYNGR3O43761 229 aa8.29□□□□□ -1.08
YBX3-215ENST00000544504 ABHD16AO95870 558 aa8.29□□□□□ -1.08
YBX3-215ENST00000544504 SERPINA3P01011 423 aa8.29□□□□□ -1.08
YBX3-215ENST00000544504 HLA-HP01893 362 aa8.29□□□□□ -1.08
YBX3-215ENST00000544504 FOSL1P15407 271 aa8.29□□□□□ -1.08
YBX3-215ENST00000544504 CBR1P16152 277 aa8.29□□□□□ -1.08
YBX3-215ENST00000544504 CELP19835 753 aa8.29□□□□□ -1.08
YBX3-215ENST00000544504 GALP22466 123 aa8.29□□□□□ -1.08
YBX3-215ENST00000544504 APLNRP35414 380 aa8.29□□□□□ -1.08
YBX3-215ENST00000544504 HTR5AP47898 357 aa8.29□□□□□ -1.08
YBX3-215ENST00000544504 RGS6P49758 472 aa8.29□□□□□ -1.08
YBX3-215ENST00000544504 GP2P55259 537 aaKnown RBP8.29□□□□□ -1.08
YBX3-215ENST00000544504 FOXG1P55316 489 aaPredicted RBP8.29□□□□□ -1.08
YBX3-215ENST00000544504 PSG4Q00888 419 aa8.29□□□□□ -1.08
YBX3-215ENST00000544504 ALKBH1Q13686 389 aaKnown RBP8.29□□□□□ -1.08
YBX3-215ENST00000544504 CDK5R1Q15078 307 aa8.29□□□□□ -1.08
YBX3-215ENST00000544504 TSTQ16762 297 aaKnown RBP8.29□□□□□ -1.08
YBX3-215ENST00000544504 C3orf36Q3SXR2 165 aa8.29□□□□□ -1.08
YBX3-215ENST00000544504 HIKESHIQ53FT3 197 aa8.29□□□□□ -1.08
YBX3-215ENST00000544504 CCDC92Q53HC0 331 aaPredicted RBP8.29□□□□□ -1.08
YBX3-215ENST00000544504 PABPC1L2AQ5JQF8 200 aa8.29□□□□□ -1.08
YBX3-215ENST00000544504 ZNF474Q6S9Z5 364 aaPredicted RBP8.29□□□□□ -1.08
YBX3-215ENST00000544504 DRAM2Q6UX65 266 aa8.29□□□□□ -1.08
YBX3-215ENST00000544504 UNQ6126/PRO20091Q6UXV3 157 aa8.29□□□□□ -1.08
YBX3-215ENST00000544504 STAC2Q6ZMT1 411 aa8.29□□□□□ -1.08
YBX3-215ENST00000544504 GDPGP1Q6ZNW5 385 aa8.29□□□□□ -1.08
YBX3-215ENST00000544504 RFLNBQ8N5W9 214 aa8.29□□□□□ -1.08
YBX3-215ENST00000544504 ZNF283Q8N7M2 679 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms