RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 PPP1R3CQ9UQK1 317 aa11.58□□□□□ -0.55
CHD4-211ENST00000544484 DOCK1Q14185 1865 aa11.58□□□□□ -0.56
CHD4-211ENST00000544484 H7C1Q1 480 aa11.58□□□□□ -0.56
CHD4-211ENST00000544484 AADACP22760 399 aa11.58□□□□□ -0.56
CHD4-211ENST00000544484 EGR3Q06889 387 aa11.58□□□□□ -0.56
CHD4-211ENST00000544484 OR1L3Q8NH93 324 aa11.58□□□□□ -0.56
CHD4-211ENST00000544484 ST7LQ8TDW4 575 aa11.58□□□□□ -0.56
CHD4-211ENST00000544484 SEH1LQ96EE3 360 aa11.58□□□□□ -0.56
CHD4-211ENST00000544484 IP6K3Q96PC2 410 aa11.58□□□□□ -0.56
CHD4-211ENST00000544484 C19orf12Q9NSK7 152 aa11.58□□□□□ -0.56
CHD4-211ENST00000544484 NPAP1Q9NZP6 1156 aa11.58□□□□□ -0.56
CHD4-211ENST00000544484 R4GMQ9 66 aa11.58□□□□□ -0.56
CHD4-211ENST00000544484 A0A087WUJ7 227 aa11.58□□□□□ -0.56
CHD4-211ENST00000544484 hCG_1809904A0A1W2PP81 198 aa11.58□□□□□ -0.56
CHD4-211ENST00000544484 A0A1W2PPE2 198 aa11.58□□□□□ -0.56
CHD4-211ENST00000544484 A0A1W2PR64 198 aa11.58□□□□□ -0.56
CHD4-211ENST00000544484 A0A1W2PRV1 198 aa11.58□□□□□ -0.56
CHD4-211ENST00000544484 DHHO43323 396 aa11.58□□□□□ -0.56
CHD4-211ENST00000544484 WIPI1Q5MNZ9 446 aaPredicted RBP11.58□□□□□ -0.56
CHD4-211ENST00000544484 TFAP2EQ6VUC0 442 aa11.58□□□□□ -0.56
CHD4-211ENST00000544484 MSRB3Q8IXL7 192 aa11.58□□□□□ -0.56
CHD4-211ENST00000544484 GABRG1Q8N1C3 465 aa11.58□□□□□ -0.56
CHD4-211ENST00000544484 SVBPQ8N300 66 aa11.58□□□□□ -0.56
CHD4-211ENST00000544484 OR2G2Q8NGZ5 317 aa11.58□□□□□ -0.56
CHD4-211ENST00000544484 DERL3Q96Q80 235 aa11.58□□□□□ -0.56
CHD4-211ENST00000544484 VN1R1Q9GZP7 353 aa11.58□□□□□ -0.56
CHD4-211ENST00000544484 KIR2DS1A0A191URI9 304 aa11.58□□□□□ -0.56
CHD4-211ENST00000544484 CBR3O75828 277 aa11.58□□□□□ -0.56
CHD4-211ENST00000544484 RGS11O94810 467 aa11.58□□□□□ -0.56
CHD4-211ENST00000544484 KIR2DS4P43632 304 aa11.58□□□□□ -0.56
CHD4-211ENST00000544484 NOVA1P51513 510 aaKnown RBP11.58□□□□□ -0.56
CHD4-211ENST00000544484 EMP3P54852 163 aa11.58□□□□□ -0.56
CHD4-211ENST00000544484 KIR2DS1Q14954 304 aa11.58□□□□□ -0.56
CHD4-211ENST00000544484 GNRHR2Q96P88 292 aa11.58□□□□□ -0.56
CHD4-211ENST00000544484 EGLN1Q9GZT9 426 aa11.58□□□□□ -0.56
CHD4-211ENST00000544484 FSCN3Q9NQT6 498 aa11.58□□□□□ -0.56
CHD4-211ENST00000544484 SPAG17Q6Q759 2223 aa11.58□□□□□ -0.56
CHD4-211ENST00000544484 CRYAAP02489 173 aa11.58□□□□□ -0.56
CHD4-211ENST00000544484 ZNF121P58317 390 aaPredicted RBP11.58□□□□□ -0.56
CHD4-211ENST00000544484 PRSS36Q5K4E3 855 aa11.58□□□□□ -0.56
CHD4-211ENST00000544484 SPATA46Q5T0L3 261 aa11.58□□□□□ -0.56
CHD4-211ENST00000544484 TMEM43Q9BTV4 400 aa11.58□□□□□ -0.56
CHD4-211ENST00000544484 JAM3Q9BX67 310 aa11.58□□□□□ -0.56
CHD4-211ENST00000544484 PLK3Q9H4B4 646 aa11.58□□□□□ -0.56
CHD4-211ENST00000544484 MOB1AQ9H8S9 216 aa11.58□□□□□ -0.56
CHD4-211ENST00000544484 SLC23A1Q9UHI7 598 aa11.58□□□□□ -0.56
CHD4-211ENST00000544484 RAB11AP62491 216 aa11.57□□□□□ -0.56
CHD4-211ENST00000544484 PLXDC2Q6UX71 529 aa11.57□□□□□ -0.56
CHD4-211ENST00000544484 OR5M9Q8NGP3 310 aa11.57□□□□□ -0.56
CHD4-211ENST00000544484 LRFN5Q96NI6 719 aa11.57□□□□□ -0.56
CHD4-211ENST00000544484 MEIKINA0A087WXM9 373 aa11.57□□□□□ -0.56
CHD4-211ENST00000544484 ZIC2O95409 532 aaPredicted RBP11.57□□□□□ -0.56
CHD4-211ENST00000544484 RAB4AP20338 218 aa11.57□□□□□ -0.56
CHD4-211ENST00000544484 TFF2Q03403 129 aa11.57□□□□□ -0.56
CHD4-211ENST00000544484 TLE4Q04727 773 aa11.57□□□□□ -0.56
CHD4-211ENST00000544484 BAMBIQ13145 260 aa11.57□□□□□ -0.56
CHD4-211ENST00000544484 TMEM200AQ86VY9 491 aa11.57□□□□□ -0.56
CHD4-211ENST00000544484 SLC35G3Q8N808 338 aa11.57□□□□□ -0.56
CHD4-211ENST00000544484 RNF141Q8WVD5 230 aa11.57□□□□□ -0.56
CHD4-211ENST00000544484 KCNE4Q8WWG9 221 aa11.57□□□□□ -0.56
CHD4-211ENST00000544484 AUNIPQ9H7T9 357 aa11.57□□□□□ -0.56
CHD4-211ENST00000544484 FBXO34Q9NWN3 711 aa11.57□□□□□ -0.56
CHD4-211ENST00000544484 ARRDC5A6NEK1 342 aa11.57□□□□□ -0.56
CHD4-211ENST00000544484 CD160O95971 181 aa11.57□□□□□ -0.56
CHD4-211ENST00000544484 RAD52P43351 418 aa11.57□□□□□ -0.56
CHD4-211ENST00000544484 AQP6Q13520 282 aa11.57□□□□□ -0.56
CHD4-211ENST00000544484 BATFQ16520 125 aa11.57□□□□□ -0.56
CHD4-211ENST00000544484 CEACAM16Q2WEN9 425 aa11.57□□□□□ -0.56
CHD4-211ENST00000544484 C9orf152Q5JTZ5 239 aa11.57□□□□□ -0.56
CHD4-211ENST00000544484 CD276Q5ZPR3 534 aa11.57□□□□□ -0.56
CHD4-211ENST00000544484 SLC38A9Q8NBW4 561 aa11.57□□□□□ -0.56
CHD4-211ENST00000544484 OR11G2Q8NGC1 345 aa11.57□□□□□ -0.56
CHD4-211ENST00000544484 SCAF4O95104 1147 aaKnown RBP11.57□□□□□ -0.56
CHD4-211ENST00000544484 DEFA4P12838 97 aa11.57□□□□□ -0.56
CHD4-211ENST00000544484 CNR1P21554 472 aa11.57□□□□□ -0.56
CHD4-211ENST00000544484 GLRA1P23415 457 aa11.57□□□□□ -0.56
CHD4-211ENST00000544484 SLC25A35Q3KQZ1 300 aa11.57□□□□□ -0.56
CHD4-211ENST00000544484 SLC25A26Q70HW3 274 aa11.57□□□□□ -0.56
CHD4-211ENST00000544484 SLC51BQ86UW2 128 aa11.57□□□□□ -0.56
CHD4-211ENST00000544484 GLCCI1Q86VQ1 547 aa11.57□□□□□ -0.56
CHD4-211ENST00000544484 OR4Q3Q8NH05 313 aa11.57□□□□□ -0.56
CHD4-211ENST00000544484 MED18Q9BUE0 208 aa11.57□□□□□ -0.56
CHD4-211ENST00000544484 C20orf141Q9NUB4 165 aa11.57□□□□□ -0.56
CHD4-211ENST00000544484 ZNF891A8MT65 544 aaPredicted RBP11.57□□□□□ -0.56
CHD4-211ENST00000544484 TXNL1O43396 289 aa11.57□□□□□ -0.56
CHD4-211ENST00000544484 ARR3P36575 388 aa11.57□□□□□ -0.56
CHD4-211ENST00000544484 TTC9Q92623 222 aa11.57□□□□□ -0.56
CHD4-211ENST00000544484 RP1P56715 2156 aa11.57□□□□□ -0.56
CHD4-211ENST00000544484 CEP290O15078 2479 aa11.57□□□□□ -0.56
CHD4-211ENST00000544484 TRGV8A0A0C4DH27 118 aa11.57□□□□□ -0.56
CHD4-211ENST00000544484 SULT1C4O75897 302 aa11.57□□□□□ -0.56
CHD4-211ENST00000544484 CD3DP04234 171 aa11.57□□□□□ -0.56
CHD4-211ENST00000544484 HAAOP46952 286 aa11.57□□□□□ -0.56
CHD4-211ENST00000544484 ELLP55199 621 aaPredicted RBP11.57□□□□□ -0.56
CHD4-211ENST00000544484 SRSF5Q13243 272 aaKnown RBP11.57□□□□□ -0.56
CHD4-211ENST00000544484 OR10G3Q8NGC4 313 aa11.57□□□□□ -0.56
CHD4-211ENST00000544484 OR6K3Q8NGY3 331 aa11.57□□□□□ -0.56
CHD4-211ENST00000544484 ZNF385DQ9H6B1 395 aa11.57□□□□□ -0.56
CHD4-211ENST00000544484 KCNE1BA0A087WTH5 132 aa11.56□□□□□ -0.56
CHD4-211ENST00000544484 SLC22A20A6NK97 555 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms