RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-215ENST00000543359 OR2T29Q8NH02 315 aa11.06□□□□□ -0.64
TNFRSF1A-215ENST00000543359 OR4Q3Q8NH05 313 aa11.06□□□□□ -0.64
TNFRSF1A-215ENST00000543359 TIMD4Q96H15 378 aa11.06□□□□□ -0.64
TNFRSF1A-215ENST00000543359 RBM4Q9BWF3 364 aaKnown RBP11.06□□□□□ -0.64
TNFRSF1A-215ENST00000543359 DGCR6LQ9BY27 220 aa11.06□□□□□ -0.64
TNFRSF1A-215ENST00000543359 NMNAT2Q9BZQ4 307 aa11.06□□□□□ -0.64
TNFRSF1A-215ENST00000543359 TMEM106BQ9NUM4 274 aa11.06□□□□□ -0.64
TNFRSF1A-215ENST00000543359 PTTG3PQ9NZH4 202 aa11.06□□□□□ -0.64
TNFRSF1A-215ENST00000543359 IL19Q9UHD0 177 aa11.06□□□□□ -0.64
TNFRSF1A-215ENST00000543359 PRPF19Q9UMS4 504 aaKnown RBP11.06□□□□□ -0.64
TNFRSF1A-215ENST00000543359 POLR1DQ9Y2S0 133 aa11.06□□□□□ -0.64
TNFRSF1A-215ENST00000543359 NPTNQ9Y639 398 aa11.06□□□□□ -0.64
TNFRSF1A-215ENST00000543359 MLNRO43193 412 aa11.05□□□□□ -0.64
TNFRSF1A-215ENST00000543359 ANOS1P23352 680 aa11.05□□□□□ -0.64
TNFRSF1A-215ENST00000543359 SRP14P37108 136 aaKnown RBP11.05□□□□□ -0.64
TNFRSF1A-215ENST00000543359 SLC3A1Q07837 685 aa11.05□□□□□ -0.64
TNFRSF1A-215ENST00000543359 ECH1Q13011 328 aa11.05□□□□□ -0.64
TNFRSF1A-215ENST00000543359 PCK2Q16822 640 aa11.05□□□□□ -0.64
TNFRSF1A-215ENST00000543359 SLC36A3Q495N2 470 aa11.05□□□□□ -0.64
TNFRSF1A-215ENST00000543359 LYPD4Q6UWN0 246 aa11.05□□□□□ -0.64
TNFRSF1A-215ENST00000543359 CD300LDQ6UXZ3 194 aa11.05□□□□□ -0.64
TNFRSF1A-215ENST00000543359 ADGRG5Q8IZF4 528 aa11.05□□□□□ -0.64
TNFRSF1A-215ENST00000543359 OR5AS1Q8N127 324 aa11.05□□□□□ -0.64
TNFRSF1A-215ENST00000543359 OR8G5Q8NG78 346 aa11.05□□□□□ -0.64
TNFRSF1A-215ENST00000543359 OR5L1Q8NGL2 311 aa11.05□□□□□ -0.64
TNFRSF1A-215ENST00000543359 ITLN1Q8WWA0 313 aa11.05□□□□□ -0.64
TNFRSF1A-215ENST00000543359 RAB39BQ96DA2 213 aa11.05□□□□□ -0.64
TNFRSF1A-215ENST00000543359 ASB9Q96DX5 294 aa11.05□□□□□ -0.64
TNFRSF1A-215ENST00000543359 OR2V2Q96R30 315 aa11.05□□□□□ -0.64
TNFRSF1A-215ENST00000543359 PITX2Q99697 317 aa11.05□□□□□ -0.64
TNFRSF1A-215ENST00000543359 SLC30A2Q9BRI3 323 aa11.05□□□□□ -0.64
TNFRSF1A-215ENST00000543359 TMPRSS13Q9BYE2 586 aa11.05□□□□□ -0.64
TNFRSF1A-215ENST00000543359 GCM1Q9NP62 436 aa11.05□□□□□ -0.64
TNFRSF1A-215ENST00000543359 KCNG2Q9UJ96 466 aa11.05□□□□□ -0.64
TNFRSF1A-215ENST00000543359 SAMHD1Q9Y3Z3 626 aaKnown RBP11.05□□□□□ -0.64
TNFRSF1A-215ENST00000543359 U3KQV3 271 aa11.05□□□□□ -0.64
TNFRSF1A-215ENST00000543359 TVP23AA6NH52 213 aa11.04□□□□□ -0.64
TNFRSF1A-215ENST00000543359 IQCF6A8MYZ5 107 aa11.04□□□□□ -0.64
TNFRSF1A-215ENST00000543359 F5H5K5 113 aa11.04□□□□□ -0.64
TNFRSF1A-215ENST00000543359 H0YL77 283 aa11.04□□□□□ -0.64
TNFRSF1A-215ENST00000543359 PNPP00491 289 aa11.04□□□□□ -0.64
TNFRSF1A-215ENST00000543359 RAP2AP10114 183 aa11.04□□□□□ -0.64
TNFRSF1A-215ENST00000543359 ANPEPP15144 967 aa11.04□□□□□ -0.64
TNFRSF1A-215ENST00000543359 TNFRSF1AP19438 455 aa11.04□□□□□ -0.64
TNFRSF1A-215ENST00000543359 ZFP36P26651 326 aaKnown RBP11.04□□□□□ -0.64
TNFRSF1A-215ENST00000543359 OTX1P32242 354 aaPredicted RBP11.04□□□□□ -0.64
TNFRSF1A-215ENST00000543359 RPS27P42677 84 aaKnown RBP11.04□□□□□ -0.64
TNFRSF1A-215ENST00000543359 SLC25A1P53007 311 aa11.04□□□□□ -0.64
TNFRSF1A-215ENST00000543359 TRAP1Q12931 704 aaKnown RBP11.04□□□□□ -0.64
TNFRSF1A-215ENST00000543359 GK2Q14410 553 aaPredicted RBP11.04□□□□□ -0.64
TNFRSF1A-215ENST00000543359 ZMYND11Q15326 602 aa11.04□□□□□ -0.64
TNFRSF1A-215ENST00000543359 FAHD2BQ6P2I3 314 aaPredicted RBP11.04□□□□□ -0.64
TNFRSF1A-215ENST00000543359 TMEM179BQ7Z7N9 219 aa11.04□□□□□ -0.64
TNFRSF1A-215ENST00000543359 LRRC28Q86X40 367 aaPredicted RBP11.04□□□□□ -0.64
TNFRSF1A-215ENST00000543359 RFLNBQ8N5W9 214 aa11.04□□□□□ -0.64
TNFRSF1A-215ENST00000543359 OR52L1Q8NGH7 329 aa11.04□□□□□ -0.64
TNFRSF1A-215ENST00000543359 OR51L1Q8NGJ5 315 aa11.04□□□□□ -0.64
TNFRSF1A-215ENST00000543359 OR13G1Q8NGZ3 307 aa11.04□□□□□ -0.64
TNFRSF1A-215ENST00000543359 POP5Q969H6 163 aaKnown RBP11.04□□□□□ -0.64
TNFRSF1A-215ENST00000543359 FAHD2AQ96GK7 314 aa11.04□□□□□ -0.64
TNFRSF1A-215ENST00000543359 ATF6BQ99941 703 aa11.04□□□□□ -0.64
TNFRSF1A-215ENST00000543359 NIPSNAP1Q9BPW8 284 aa11.04□□□□□ -0.64
TNFRSF1A-215ENST00000543359 CHID1Q9BWS9 393 aa11.04□□□□□ -0.64
TNFRSF1A-215ENST00000543359 TSSK6Q9BXA6 273 aa11.04□□□□□ -0.64
TNFRSF1A-215ENST00000543359 WDR76Q9H967 626 aa11.04□□□□□ -0.64
TNFRSF1A-215ENST00000543359 DDX28Q9NUL7 540 aaKnown RBP11.04□□□□□ -0.64
TNFRSF1A-215ENST00000543359 C5orf63A6NC05 138 aa11.03□□□□□ -0.64
TNFRSF1A-215ENST00000543359 TMEM178BH3BS89 294 aa11.03□□□□□ -0.64
TNFRSF1A-215ENST00000543359 HLA-DQA2P01906 255 aa11.03□□□□□ -0.64
TNFRSF1A-215ENST00000543359 TNFSF4P23510 183 aa11.03□□□□□ -0.64
TNFRSF1A-215ENST00000543359 PMELP40967 661 aa11.03□□□□□ -0.64
TNFRSF1A-215ENST00000543359 MMP16P51512 607 aa11.03□□□□□ -0.64
TNFRSF1A-215ENST00000543359 PRSS12P56730 875 aa11.03□□□□□ -0.64
TNFRSF1A-215ENST00000543359 CRMP1Q14194 572 aa11.03□□□□□ -0.64
TNFRSF1A-215ENST00000543359 FAM98BQ52LJ0 330 aaKnown RBP11.03□□□□□ -0.64
TNFRSF1A-215ENST00000543359 LINC01590Q5TEZ4 76 aa11.03□□□□□ -0.64
TNFRSF1A-215ENST00000543359 ZNF511Q8NB15 262 aa11.03□□□□□ -0.64
TNFRSF1A-215ENST00000543359 PROKR2Q8NFJ6 384 aa11.03□□□□□ -0.64
TNFRSF1A-215ENST00000543359 OR10AD1Q8NGE0 317 aa11.03□□□□□ -0.64
TNFRSF1A-215ENST00000543359 OR9Q1Q8NGQ5 310 aa11.03□□□□□ -0.64
TNFRSF1A-215ENST00000543359 OR2AJ1Q8NGZ0 328 aa11.03□□□□□ -0.64
TNFRSF1A-215ENST00000543359 OR2T4Q8NH00 348 aa11.03□□□□□ -0.64
TNFRSF1A-215ENST00000543359 CCDC124Q96CT7 223 aaKnown RBP11.03□□□□□ -0.64
TNFRSF1A-215ENST00000543359 MEGF10Q96KG7 1140 aa11.03□□□□□ -0.64
TNFRSF1A-215ENST00000543359 ZNF582Q96NG8 517 aaPredicted RBP11.03□□□□□ -0.64
TNFRSF1A-215ENST00000543359 GAL3ST1Q99999 423 aa11.03□□□□□ -0.64
TNFRSF1A-215ENST00000543359 THTPAQ9BU02 230 aa11.03□□□□□ -0.64
TNFRSF1A-215ENST00000543359 C19orf24Q9BVV8 132 aa11.03□□□□□ -0.64
TNFRSF1A-215ENST00000543359 CDADC1Q9BWV3 514 aa11.03□□□□□ -0.64
TNFRSF1A-215ENST00000543359 REEP1Q9H902 201 aa11.03□□□□□ -0.64
TNFRSF1A-215ENST00000543359 TBC1D23Q9NUY8 699 aa11.03□□□□□ -0.64
TNFRSF1A-215ENST00000543359 ARMC1Q9NVT9 282 aa11.03□□□□□ -0.64
TNFRSF1A-215ENST00000543359 OPN4Q9UHM6 478 aa11.03□□□□□ -0.64
TNFRSF1A-215ENST00000543359 PPP1R3CQ9UQK1 317 aa11.03□□□□□ -0.64
TNFRSF1A-215ENST00000543359 PKD1L1Q8TDX9 2849 aa11.02□□□□□ -0.65
TNFRSF1A-215ENST00000543359 PPIAL4EA0A075B759 164 aa11.02□□□□□ -0.65
TNFRSF1A-215ENST00000543359 LOC105371242A0A075B767 164 aa11.02□□□□□ -0.65
TNFRSF1A-215ENST00000543359 PPIAL4CA0A0B4J2A2 164 aa11.02□□□□□ -0.65
TNFRSF1A-215ENST00000543359 AQP12BA6NM10 295 aa11.02□□□□□ -0.65
TNFRSF1A-215ENST00000543359 F5H0A9 414 aaPredicted RBP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms