RNA–Protein interactions for RNA: ENST00000542355.6

SCG3-202, Transcript of secretogranin III, humanhuman

TSL 2 BASIC

Gene SCG3, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-202ENST00000542355 LUZP2Q86TE4 346 aa9.67□□□□□ -0.86
SCG3-202ENST00000542355 SIAH3Q8IW03 269 aa9.67□□□□□ -0.86
SCG3-202ENST00000542355 ZNF100Q8IYN0 542 aa9.67□□□□□ -0.86
SCG3-202ENST00000542355 UBE2J2Q8N2K1 259 aa9.67□□□□□ -0.86
SCG3-202ENST00000542355 SLC22A24Q8N4F4 322 aa9.67□□□□□ -0.86
SCG3-202ENST00000542355 ZNF283Q8N7M2 679 aa9.67□□□□□ -0.86
SCG3-202ENST00000542355 EXTL1Q92935 676 aa9.67□□□□□ -0.86
SCG3-202ENST00000542355 APH1AQ96BI3 265 aa9.67□□□□□ -0.86
SCG3-202ENST00000542355 DIRAS2Q96HU8 199 aa9.67□□□□□ -0.86
SCG3-202ENST00000542355 WDFY2Q96P53 400 aa9.67□□□□□ -0.86
SCG3-202ENST00000542355 TRIB1Q96RU8 372 aa9.67□□□□□ -0.86
SCG3-202ENST00000542355 LINC00470Q9BZP3 86 aa9.67□□□□□ -0.86
SCG3-202ENST00000542355 SLITRK2Q9H156 845 aa9.67□□□□□ -0.86
SCG3-202ENST00000542355 ZNF407Q9C0G0 2248 aa9.67□□□□□ -0.86
SCG3-202ENST00000542355 TRAV8-7A0A075B6U6 113 aa9.67□□□□□ -0.86
SCG3-202ENST00000542355 TRBV5-7A0A0A0MS05 114 aa9.67□□□□□ -0.86
SCG3-202ENST00000542355 PDCD5O14737 125 aa9.67□□□□□ -0.86
SCG3-202ENST00000542355 PAHP00439 452 aa9.67□□□□□ -0.86
SCG3-202ENST00000542355 TTRP02766 147 aa9.67□□□□□ -0.86
SCG3-202ENST00000542355 MAS1P04201 325 aa9.67□□□□□ -0.86
SCG3-202ENST00000542355 CD40LGP29965 261 aa9.67□□□□□ -0.86
SCG3-202ENST00000542355 THBS2P35442 1172 aa9.67□□□□□ -0.86
SCG3-202ENST00000542355 ETV6P41212 452 aa9.67□□□□□ -0.86
SCG3-202ENST00000542355 CX3CR1P49238 355 aa9.67□□□□□ -0.86
SCG3-202ENST00000542355 GRB2P62993 217 aaKnown RBP9.67□□□□□ -0.86
SCG3-202ENST00000542355 HIST1H3AP68431 136 aa9.67□□□□□ -0.86
SCG3-202ENST00000542355 MADCAM1Q13477 382 aa9.67□□□□□ -0.86
SCG3-202ENST00000542355 HIST2H3PS2Q5TEC6 136 aa9.67□□□□□ -0.86
SCG3-202ENST00000542355 TMEM244Q5VVB8 128 aa9.67□□□□□ -0.86
SCG3-202ENST00000542355 ZNF813Q6ZN06 617 aa9.67□□□□□ -0.86
SCG3-202ENST00000542355 HIST2H3AQ71DI3 136 aa9.67□□□□□ -0.86
SCG3-202ENST00000542355 NAA40Q86UY6 237 aa9.67□□□□□ -0.86
SCG3-202ENST00000542355 ELMOD2Q8IZ81 293 aa9.67□□□□□ -0.86
SCG3-202ENST00000542355 ACOT12Q8WYK0 555 aa9.67□□□□□ -0.86
SCG3-202ENST00000542355 SLC7A6Q92536 515 aa9.67□□□□□ -0.86
SCG3-202ENST00000542355 PHF3Q92576 2039 aaKnown RBP9.67□□□□□ -0.86
SCG3-202ENST00000542355 SARAFQ96BY9 339 aa9.67□□□□□ -0.86
SCG3-202ENST00000542355 SPENQ96T58 3664 aaKnown RBP9.67□□□□□ -0.86
SCG3-202ENST00000542355 KCNJ15Q99712 375 aa9.67□□□□□ -0.86
SCG3-202ENST00000542355 ZCCHC4Q9H5U6 513 aa9.67□□□□□ -0.86
SCG3-202ENST00000542355 DDX28Q9NUL7 540 aaKnown RBP9.67□□□□□ -0.86
SCG3-202ENST00000542355 HHLA2Q9UM44 414 aa9.67□□□□□ -0.86
SCG3-202ENST00000542355 ZNF175Q9Y473 711 aa9.67□□□□□ -0.86
SCG3-202ENST00000542355 DMXL2Q8TDJ6 3036 aa9.66□□□□□ -0.86
SCG3-202ENST00000542355 LOC107986453A0A1B0GWG9 222 aa9.66□□□□□ -0.86
SCG3-202ENST00000542355 FABP12A6NFH5 140 aa9.66□□□□□ -0.86
SCG3-202ENST00000542355 OR6C65A6NJZ3 312 aa9.66□□□□□ -0.86
SCG3-202ENST00000542355 ZNF587BE7ETH6 402 aa9.66□□□□□ -0.86
SCG3-202ENST00000542355 IL2RAP01589 272 aa9.66□□□□□ -0.86
SCG3-202ENST00000542355 ANXA2P07355 339 aaKnown RBP9.66□□□□□ -0.86
SCG3-202ENST00000542355 CST2P09228 141 aa9.66□□□□□ -0.86
SCG3-202ENST00000542355 ACSM4P0C7M7 580 aa9.66□□□□□ -0.86
SCG3-202ENST00000542355 UBCP0CG48 685 aaKnown RBP9.66□□□□□ -0.86
SCG3-202ENST00000542355 RAC2P15153 192 aa9.66□□□□□ -0.86
SCG3-202ENST00000542355 ATF1P18846 271 aa9.66□□□□□ -0.86
SCG3-202ENST00000542355 AGTR1P30556 359 aa9.66□□□□□ -0.86
SCG3-202ENST00000542355 FOXG1P55316 489 aaPredicted RBP9.66□□□□□ -0.86
SCG3-202ENST00000542355 PPP3R1P63098 170 aa9.66□□□□□ -0.86
SCG3-202ENST00000542355 IFITM3Q01628 133 aa9.66□□□□□ -0.86
SCG3-202ENST00000542355 FAPQ12884 760 aa9.66□□□□□ -0.86
SCG3-202ENST00000542355 TBR1Q16650 682 aa9.66□□□□□ -0.86
SCG3-202ENST00000542355 SLC16A14Q7RTX9 510 aa9.66□□□□□ -0.86
SCG3-202ENST00000542355 SKA3Q8IX90 412 aa9.66□□□□□ -0.86
SCG3-202ENST00000542355 OR13C3Q8NGS6 347 aa9.66□□□□□ -0.86
SCG3-202ENST00000542355 KCTD12Q96CX2 325 aaKnown RBP9.66□□□□□ -0.86
SCG3-202ENST00000542355 GFI1Q99684 422 aa9.66□□□□□ -0.86
SCG3-202ENST00000542355 PALMDQ9NP74 551 aa9.66□□□□□ -0.86
SCG3-202ENST00000542355 ZNF319Q9P2F9 582 aa9.66□□□□□ -0.86
SCG3-202ENST00000542355 A0A096LPE4 126 aa9.65□□□□□ -0.86
SCG3-202ENST00000542355 A0A0B4J203 849 aa9.65□□□□□ -0.86
SCG3-202ENST00000542355 A0A1W2PPZ6 126 aa9.65□□□□□ -0.86
SCG3-202ENST00000542355 TBX1O43435 398 aa9.65□□□□□ -0.86
SCG3-202ENST00000542355 FARS2O95363 451 aaKnown RBP9.65□□□□□ -0.86
SCG3-202ENST00000542355 CD2P06729 351 aa9.65□□□□□ -0.86
SCG3-202ENST00000542355 DBHP09172 617 aa9.65□□□□□ -0.86
SCG3-202ENST00000542355 FCGR2AP12318 317 aa9.65□□□□□ -0.86
SCG3-202ENST00000542355 ZNF32P17041 273 aa9.65□□□□□ -0.86
SCG3-202ENST00000542355 ADRA2CP18825 462 aa9.65□□□□□ -0.86
SCG3-202ENST00000542355 ACHEP22303 614 aa9.65□□□□□ -0.86
SCG3-202ENST00000542355 ANOS1P23352 680 aa9.65□□□□□ -0.86
SCG3-202ENST00000542355 CTSSP25774 331 aa9.65□□□□□ -0.86
SCG3-202ENST00000542355 SLC6A9P48067 706 aa9.65□□□□□ -0.86
SCG3-202ENST00000542355 BPIFB3P59826 476 aa9.65□□□□□ -0.86
SCG3-202ENST00000542355 ARF1P84077 181 aaKnown RBP9.65□□□□□ -0.86
SCG3-202ENST00000542355 RSPO1Q2MKA7 263 aaPredicted RBP9.65□□□□□ -0.86
SCG3-202ENST00000542355 HES5Q5TA89 166 aa9.65□□□□□ -0.86
SCG3-202ENST00000542355 FAM131AQ6UXB0 335 aa9.65□□□□□ -0.86
SCG3-202ENST00000542355 FAM57BQ71RH2 274 aa9.65□□□□□ -0.86
SCG3-202ENST00000542355 ADGRE4PQ86SQ3 457 aa9.65□□□□□ -0.86
SCG3-202ENST00000542355 LRRTM1Q86UE6 522 aa9.65□□□□□ -0.86
SCG3-202ENST00000542355 DNAAF1Q8NEP3 725 aa9.65□□□□□ -0.86
SCG3-202ENST00000542355 FGFBP3Q8TAT2 258 aa9.65□□□□□ -0.86
SCG3-202ENST00000542355 OR51E1Q8TCB6 317 aa9.65□□□□□ -0.86
SCG3-202ENST00000542355 THRSPQ92748 146 aa9.65□□□□□ -0.86
SCG3-202ENST00000542355 CLCF1Q9UBD9 225 aa9.65□□□□□ -0.86
SCG3-202ENST00000542355 DKK4Q9UBT3 224 aa9.65□□□□□ -0.86
SCG3-202ENST00000542355 NUFIP1Q9UHK0 495 aaKnown RBP9.65□□□□□ -0.86
SCG3-202ENST00000542355 PRSS50Q9UI38 385 aa9.65□□□□□ -0.86
SCG3-202ENST00000542355 TP53TG5Q9Y2B4 290 aa9.65□□□□□ -0.86
SCG3-202ENST00000542355 RAXQ9Y2V3 346 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms