RNA–Protein interactions for RNA: ENST00000541005.1

LTBR-208, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-208ENST00000541005 G3V2T6 193 aa11.16□□□□□ -0.62
LTBR-208ENST00000541005 PRODHO43272 600 aa11.16□□□□□ -0.62
LTBR-208ENST00000541005 TLX2O43763 284 aaPredicted RBP11.16□□□□□ -0.62
LTBR-208ENST00000541005 GLCEO94923 617 aa11.16□□□□□ -0.62
LTBR-208ENST00000541005 IGHV1-46P01743 117 aa11.16□□□□□ -0.62
LTBR-208ENST00000541005 CD55P08174 381 aa11.16□□□□□ -0.62
LTBR-208ENST00000541005 ZNF23P17027 643 aa11.16□□□□□ -0.62
LTBR-208ENST00000541005 HOXB4P17483 251 aaPredicted RBP11.16□□□□□ -0.62
LTBR-208ENST00000541005 ESRRGP62508 458 aa11.16□□□□□ -0.62
LTBR-208ENST00000541005 KDM4DQ6B0I6 523 aa11.16□□□□□ -0.62
LTBR-208ENST00000541005 ZDHHC13Q8IUH4 622 aa11.16□□□□□ -0.62
LTBR-208ENST00000541005 ZNF511Q8NB15 262 aa11.16□□□□□ -0.62
LTBR-208ENST00000541005 OR6K6Q8NGW6 343 aa11.16□□□□□ -0.62
LTBR-208ENST00000541005 ST7LQ8TDW4 575 aa11.16□□□□□ -0.62
LTBR-208ENST00000541005 YIPF5Q969M3 257 aa11.16□□□□□ -0.62
LTBR-208ENST00000541005 HAVCR1Q96D42 359 aa11.16□□□□□ -0.62
LTBR-208ENST00000541005 CENPNQ96H22 339 aaPredicted RBP11.16□□□□□ -0.62
LTBR-208ENST00000541005 DIRC2Q96SL1 478 aa11.16□□□□□ -0.62
LTBR-208ENST00000541005 TEX12Q9BXU0 123 aa11.16□□□□□ -0.62
LTBR-208ENST00000541005 PURGQ9UJV8 347 aaKnown RBP11.16□□□□□ -0.62
LTBR-208ENST00000541005 ZDHHC8Q9ULC8 765 aa11.16□□□□□ -0.62
LTBR-208ENST00000541005 PRR23D1E9PI22 279 aaPredicted RBP11.15□□□□□ -0.62
LTBR-208ENST00000541005 ZNF593O00488 134 aaPredicted RBP11.15□□□□□ -0.62
LTBR-208ENST00000541005 TIMM8AO60220 97 aaPredicted RBP11.15□□□□□ -0.62
LTBR-208ENST00000541005 LILRA1O75019 489 aa11.15□□□□□ -0.62
LTBR-208ENST00000541005 SPARCP09486 303 aa11.15□□□□□ -0.62
LTBR-208ENST00000541005 PRR23D2P0DMB1 279 aaPredicted RBP11.15□□□□□ -0.62
LTBR-208ENST00000541005 SLC2A5P22732 501 aa11.15□□□□□ -0.62
LTBR-208ENST00000541005 RPS27P42677 84 aaKnown RBP11.15□□□□□ -0.62
LTBR-208ENST00000541005 CRYBB2P43320 205 aa11.15□□□□□ -0.62
LTBR-208ENST00000541005 CRISP1P54107 249 aa11.15□□□□□ -0.62
LTBR-208ENST00000541005 TMEM33P57088 247 aa11.15□□□□□ -0.62
LTBR-208ENST00000541005 CCL8P80075 99 aa11.15□□□□□ -0.62
LTBR-208ENST00000541005 CDK5R2Q13319 367 aa11.15□□□□□ -0.62
LTBR-208ENST00000541005 GGTLC2Q14390 218 aa11.15□□□□□ -0.62
LTBR-208ENST00000541005 PLBD1Q6P4A8 553 aa11.15□□□□□ -0.62
LTBR-208ENST00000541005 RHOUQ7L0Q8 258 aa11.15□□□□□ -0.62
LTBR-208ENST00000541005 DCXRQ7Z4W1 244 aa11.15□□□□□ -0.62
LTBR-208ENST00000541005 TIGD4Q8IY51 512 aa11.15□□□□□ -0.62
LTBR-208ENST00000541005 LRTOMTQ8WZ04 291 aa11.15□□□□□ -0.62
LTBR-208ENST00000541005 SPTSSAQ969W0 71 aa11.15□□□□□ -0.62
LTBR-208ENST00000541005 CMBLQ96DG6 245 aa11.15□□□□□ -0.62
LTBR-208ENST00000541005 POM121Q96HA1 1249 aa11.15□□□□□ -0.62
LTBR-208ENST00000541005 INTS14Q96SY0 518 aa11.15□□□□□ -0.62
LTBR-208ENST00000541005 OSBPL10Q9BXB5 764 aa11.15□□□□□ -0.62
LTBR-208ENST00000541005 MED20Q9H944 212 aa11.15□□□□□ -0.62
LTBR-208ENST00000541005 SAP30LQ9HAJ7 183 aa11.15□□□□□ -0.62
LTBR-208ENST00000541005 ENOPH1Q9UHY7 261 aa11.15□□□□□ -0.62
LTBR-208ENST00000541005 A0A1B0GWJ7 208 aa11.14□□□□□ -0.63
LTBR-208ENST00000541005 ZNF878C9JN71 531 aa11.14□□□□□ -0.63
LTBR-208ENST00000541005 F5H5K5 113 aa11.14□□□□□ -0.63
LTBR-208ENST00000541005 LYNX1G3V0Z9 82 aa11.14□□□□□ -0.63
LTBR-208ENST00000541005 M0R135 149 aa11.14□□□□□ -0.63
LTBR-208ENST00000541005 IGHV4-31P0DP07 118 aa11.14□□□□□ -0.63
LTBR-208ENST00000541005 LYNX1P0DP58 116 aa11.14□□□□□ -0.63
LTBR-208ENST00000541005 COL8A2P25067 703 aa11.14□□□□□ -0.63
LTBR-208ENST00000541005 GSTT1P30711 240 aa11.14□□□□□ -0.63
LTBR-208ENST00000541005 GZMKP49863 264 aa11.14□□□□□ -0.63
LTBR-208ENST00000541005 CHN2P52757 468 aa11.14□□□□□ -0.63
LTBR-208ENST00000541005 TPTEP56180 551 aa11.14□□□□□ -0.63
LTBR-208ENST00000541005 SLC35D3Q5M8T2 416 aa11.14□□□□□ -0.63
LTBR-208ENST00000541005 C6orf52Q5T4I8 152 aa11.14□□□□□ -0.63
LTBR-208ENST00000541005 ZFP1Q6P2D0 407 aa11.14□□□□□ -0.63
LTBR-208ENST00000541005 DRAM2Q6UX65 266 aa11.14□□□□□ -0.63
LTBR-208ENST00000541005 Q6ZR03 302 aa11.14□□□□□ -0.63
LTBR-208ENST00000541005 AMIGO2Q86SJ2 522 aa11.14□□□□□ -0.63
LTBR-208ENST00000541005 CPOQ8IVL8 374 aa11.14□□□□□ -0.63
LTBR-208ENST00000541005 HPS1Q92902 700 aa11.14□□□□□ -0.63
LTBR-208ENST00000541005 ELMOD3Q96FG2 381 aa11.14□□□□□ -0.63
LTBR-208ENST00000541005 ZNF799Q96GE5 643 aa11.14□□□□□ -0.63
LTBR-208ENST00000541005 PRRG3Q9BZD7 231 aa11.14□□□□□ -0.63
LTBR-208ENST00000541005 KRT84Q9NSB2 600 aa11.14□□□□□ -0.63
LTBR-208ENST00000541005 ZNF275Q9NSD4 429 aaPredicted RBP11.14□□□□□ -0.63
LTBR-208ENST00000541005 DECR2Q9NUI1 292 aa11.14□□□□□ -0.63
LTBR-208ENST00000541005 TMEFF2Q9UIK5 374 aaPredicted RBP11.14□□□□□ -0.63
LTBR-208ENST00000541005 IGHV1-69-2A0A0G2JMI3 117 aa11.13□□□□□ -0.63
LTBR-208ENST00000541005 ZAR1LA6NP61 321 aa11.13□□□□□ -0.63
LTBR-208ENST00000541005 IQCF6A8MYZ5 107 aa11.13□□□□□ -0.63
LTBR-208ENST00000541005 H3BNX3 289 aa11.13□□□□□ -0.63
LTBR-208ENST00000541005 SPRY3O43610 288 aa11.13□□□□□ -0.63
LTBR-208ENST00000541005 MITFO75030 526 aaPredicted RBP11.13□□□□□ -0.63
LTBR-208ENST00000541005 GRB2P62993 217 aaKnown RBP11.13□□□□□ -0.63
LTBR-208ENST00000541005 PPP2R2BQ00005 443 aa11.13□□□□□ -0.63
LTBR-208ENST00000541005 HLXQ14774 488 aaPredicted RBP11.13□□□□□ -0.63
LTBR-208ENST00000541005 KPNB1Q14974 876 aaKnown RBP11.13□□□□□ -0.63
LTBR-208ENST00000541005 PTGES3Q15185 160 aaKnown RBP11.13□□□□□ -0.63
LTBR-208ENST00000541005 TSTQ16762 297 aaKnown RBP11.13□□□□□ -0.63
LTBR-208ENST00000541005 SLX4IPQ5VYV7 408 aa11.13□□□□□ -0.63
LTBR-208ENST00000541005 TMEM236Q5W0B7 351 aa11.13□□□□□ -0.63
LTBR-208ENST00000541005 CYB5R2Q6BCY4 276 aa11.13□□□□□ -0.63
LTBR-208ENST00000541005 USP51Q70EK9 711 aa11.13□□□□□ -0.63
LTBR-208ENST00000541005 SHFQ7M4L6 423 aa11.13□□□□□ -0.63
LTBR-208ENST00000541005 DPY19L4Q7Z388 723 aa11.13□□□□□ -0.63
LTBR-208ENST00000541005 ERI1Q8IV48 349 aaKnown RBP11.13□□□□□ -0.63
LTBR-208ENST00000541005 ZNF454Q8N9F8 522 aa11.13□□□□□ -0.63
LTBR-208ENST00000541005 OR6N2Q8NGY6 317 aa11.13□□□□□ -0.63
LTBR-208ENST00000541005 RNF133Q8WVZ7 376 aa11.13□□□□□ -0.63
LTBR-208ENST00000541005 PYDC1Q8WXC3 89 aa11.13□□□□□ -0.63
LTBR-208ENST00000541005 SLAMF6Q96DU3 332 aa11.13□□□□□ -0.63
LTBR-208ENST00000541005 C1orf159Q96HA4 380 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms