RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, human

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
YBX3-210	ENST00000540975	TMEM131L	A2VDJ0	1609 aa		3.55	□□□□□ -1.84
YBX3-210	ENST00000540975	PIK3C2B	O00750	1634 aa		3.55	□□□□□ -1.84
YBX3-210	ENST00000540975	TRAV25	A0A0B4J276	109 aa		3.55	□□□□□ -1.84
YBX3-210	ENST00000540975	VPS37C	A5D8V6	355 aa	Predicted RBP	3.55	□□□□□ -1.84
YBX3-210	ENST00000540975	GMNC	A6NCL1	334 aa		3.55	□□□□□ -1.84
YBX3-210	ENST00000540975	NKX2-6	A6NCS4	301 aa		3.55	□□□□□ -1.84
YBX3-210	ENST00000540975	SLC22A1	O15245	554 aa		3.55	□□□□□ -1.84
YBX3-210	ENST00000540975	LANCL1	O43813	399 aa		3.55	□□□□□ -1.84
YBX3-210	ENST00000540975	BCAS1	O75363	584 aa	Predicted RBP	3.55	□□□□□ -1.84
YBX3-210	ENST00000540975	WBP4	O75554	376 aa	Known RBP	3.55	□□□□□ -1.84
YBX3-210	ENST00000540975	KLF8	O95600	359 aa	Predicted RBP	3.55	□□□□□ -1.84
YBX3-210	ENST00000540975	TNNC2	P02585	160 aa		3.55	□□□□□ -1.84
YBX3-210	ENST00000540975	SERPINA5	P05154	406 aa		3.55	□□□□□ -1.84
YBX3-210	ENST00000540975	PCCA	P05165	728 aa	Predicted RBP	3.55	□□□□□ -1.84
YBX3-210	ENST00000540975	RPA2	P15927	270 aa		3.55	□□□□□ -1.84
YBX3-210	ENST00000540975	WARS	P23381	471 aa	Known RBP	3.55	□□□□□ -1.84
YBX3-210	ENST00000540975	CRABP1	P29762	137 aa		3.55	□□□□□ -1.84
YBX3-210	ENST00000540975	ADRA1A	P35348	466 aa		3.55	□□□□□ -1.84
YBX3-210	ENST00000540975	SLC1A2	P43004	574 aa		3.55	□□□□□ -1.84
YBX3-210	ENST00000540975	CAPZB	P47756	277 aa		3.55	□□□□□ -1.84
YBX3-210	ENST00000540975	OMP	P47874	163 aa		3.55	□□□□□ -1.84
YBX3-210	ENST00000540975	CSNK1E	P49674	416 aa	Known RBP	3.55	□□□□□ -1.84
YBX3-210	ENST00000540975	AP2S1	P53680	142 aa	Predicted RBP	3.55	□□□□□ -1.84
YBX3-210	ENST00000540975	KCNJ2	P63252	427 aa		3.55	□□□□□ -1.84
YBX3-210	ENST00000540975	BST1	Q10588	318 aa		3.55	□□□□□ -1.84
YBX3-210	ENST00000540975	STX3	Q13277	289 aa		3.55	□□□□□ -1.84
YBX3-210	ENST00000540975	GOLGA7B	Q2TAP0	167 aa		3.55	□□□□□ -1.84
YBX3-210	ENST00000540975	CHRFAM7A	Q494W8	412 aa		3.55	□□□□□ -1.84
YBX3-210	ENST00000540975	LIN52	Q52LA3	116 aa		3.55	□□□□□ -1.84
YBX3-210	ENST00000540975	ACOT7L	Q6ZUV0	252 aa		3.55	□□□□□ -1.84
YBX3-210	ENST00000540975	SMIM15	Q7Z3B0	74 aa		3.55	□□□□□ -1.84
YBX3-210	ENST00000540975	C16orf62	Q7Z3J2	963 aa		3.55	□□□□□ -1.84
YBX3-210	ENST00000540975	DPPA2	Q7Z7J5	298 aa		3.55	□□□□□ -1.84
YBX3-210	ENST00000540975	SETD3	Q86TU7	594 aa	Predicted RBP	3.55	□□□□□ -1.84
YBX3-210	ENST00000540975	TMEM17	Q86X19	198 aa		3.55	□□□□□ -1.84
YBX3-210	ENST00000540975	FAM58A	Q8N1B3	248 aa		3.55	□□□□□ -1.84
YBX3-210	ENST00000540975	MTURN	Q8N3F0	131 aa		3.55	□□□□□ -1.84
YBX3-210	ENST00000540975	MMGT1	Q8N4V1	131 aa		3.55	□□□□□ -1.84
YBX3-210	ENST00000540975	OR10T2	Q8NGX3	314 aa		3.55	□□□□□ -1.84
YBX3-210	ENST00000540975	OR10J5	Q8NHC4	309 aa		3.55	□□□□□ -1.84
YBX3-210	ENST00000540975	ACTL9	Q8TC94	416 aa		3.55	□□□□□ -1.84
YBX3-210	ENST00000540975	NAT14	Q8WUY8	206 aa		3.55	□□□□□ -1.84
YBX3-210	ENST00000540975	FAM151A	Q8WW52	585 aa		3.55	□□□□□ -1.84
YBX3-210	ENST00000540975	SLC41A3	Q96GZ6	507 aa		3.55	□□□□□ -1.84
YBX3-210	ENST00000540975	CHP1	Q99653	195 aa		3.55	□□□□□ -1.84
YBX3-210	ENST00000540975	KLHDC3	Q9BQ90	382 aa		3.55	□□□□□ -1.84
YBX3-210	ENST00000540975	NAT9	Q9BTE0	207 aa		3.55	□□□□□ -1.84
YBX3-210	ENST00000540975	METTL9	Q9H1A3	318 aa		3.55	□□□□□ -1.84
YBX3-210	ENST00000540975	PIGU	Q9H490	435 aa		3.55	□□□□□ -1.84
YBX3-210	ENST00000540975	ZNF385D	Q9H6B1	395 aa		3.55	□□□□□ -1.84
YBX3-210	ENST00000540975	C11orf49	Q9H6J7	331 aa		3.55	□□□□□ -1.84
YBX3-210	ENST00000540975	FN3KRP	Q9HA64	309 aa		3.55	□□□□□ -1.84
YBX3-210	ENST00000540975	GIN1	Q9NXP7	522 aa		3.55	□□□□□ -1.84
YBX3-210	ENST00000540975	UVRAG	Q9P2Y5	699 aa		3.55	□□□□□ -1.84
YBX3-210	ENST00000540975	C3orf18	Q9UK00	162 aa		3.55	□□□□□ -1.84
YBX3-210	ENST00000540975	RPL26L1	Q9UNX3	145 aa	Known RBP	3.55	□□□□□ -1.84
YBX3-210	ENST00000540975	TP53TG5	Q9Y2B4	290 aa		3.55	□□□□□ -1.84
YBX3-210	ENST00000540975	HYOU1	Q9Y4L1	999 aa		3.55	□□□□□ -1.84
YBX3-210	ENST00000540975	USH1C	Q9Y6N9	552 aa		3.55	□□□□□ -1.84
YBX3-210	ENST00000540975	WNK3	Q9BYP7	1800 aa		3.55	□□□□□ -1.84
YBX3-210	ENST00000540975	ITSN1	Q15811	1721 aa		3.55	□□□□□ -1.84
YBX3-210	ENST00000540975	MED1	Q15648	1581 aa	Predicted RBP	3.55	□□□□□ -1.84
YBX3-210	ENST00000540975	TULP4	Q9NRJ4	1543 aa		3.54	□□□□□ -1.84
YBX3-210	ENST00000540975	ARHGEF28	Q8N1W1	1705 aa	Known RBP	3.54	□□□□□ -1.84
YBX3-210	ENST00000540975	ARHGEF35	A5YM69	484 aa		3.54	□□□□□ -1.84
YBX3-210	ENST00000540975	SMIM23	A6NLE4	172 aa		3.54	□□□□□ -1.84
YBX3-210	ENST00000540975		A8MUI8	341 aa		3.54	□□□□□ -1.84
YBX3-210	ENST00000540975	hCG_2039718	K7EN88	272 aa		3.54	□□□□□ -1.84
YBX3-210	ENST00000540975	FOXE1	O00358	373 aa	Predicted RBP	3.54	□□□□□ -1.84
YBX3-210	ENST00000540975	CHAD	O15335	359 aa		3.54	□□□□□ -1.84
YBX3-210	ENST00000540975	FAM189A1	O60320	539 aa		3.54	□□□□□ -1.84
YBX3-210	ENST00000540975	SNN	O75324	88 aa	Predicted RBP	3.54	□□□□□ -1.84
YBX3-210	ENST00000540975	UGT2B17	O75795	530 aa		3.54	□□□□□ -1.84
YBX3-210	ENST00000540975	OR4F21	O95013	312 aa		3.54	□□□□□ -1.84
YBX3-210	ENST00000540975	VAMP5	O95183	116 aa		3.54	□□□□□ -1.84
YBX3-210	ENST00000540975	GP1BA	P07359	652 aa		3.54	□□□□□ -1.84
YBX3-210	ENST00000540975	FAM228B	P0C875	321 aa		3.54	□□□□□ -1.84
YBX3-210	ENST00000540975	DBT	P11182	482 aa	Known RBP	3.54	□□□□□ -1.84
YBX3-210	ENST00000540975	TCP1	P17987	556 aa	Known RBP	3.54	□□□□□ -1.84
YBX3-210	ENST00000540975	CNR1	P21554	472 aa		3.54	□□□□□ -1.84
YBX3-210	ENST00000540975	TEAD1	P28347	426 aa		3.54	□□□□□ -1.84
YBX3-210	ENST00000540975	IL12B	P29460	328 aa		3.54	□□□□□ -1.84
YBX3-210	ENST00000540975	CD80	P33681	288 aa		3.54	□□□□□ -1.84
YBX3-210	ENST00000540975	TALDO1	P37837	337 aa		3.54	□□□□□ -1.84
YBX3-210	ENST00000540975	DAOA	P59103	153 aa		3.54	□□□□□ -1.84
YBX3-210	ENST00000540975	PFN3	P60673	137 aa		3.54	□□□□□ -1.84
YBX3-210	ENST00000540975	HERVK_113	P61574	105 aa		3.54	□□□□□ -1.84
YBX3-210	ENST00000540975	PSPH	P78330	225 aa		3.54	□□□□□ -1.84
YBX3-210	ENST00000540975	FLI1	Q01543	452 aa	Predicted RBP	3.54	□□□□□ -1.84
YBX3-210	ENST00000540975	ZNHIT3	Q15649	155 aa	Predicted RBP	3.54	□□□□□ -1.84
YBX3-210	ENST00000540975	PDK4	Q16654	411 aa		3.54	□□□□□ -1.84
YBX3-210	ENST00000540975	TRIM16L	Q309B1	348 aa		3.54	□□□□□ -1.84
YBX3-210	ENST00000540975	RABGAP1L	Q5R372	815 aa		3.54	□□□□□ -1.84
YBX3-210	ENST00000540975	PLCXD3	Q63HM9	321 aa		3.54	□□□□□ -1.84
YBX3-210	ENST00000540975	LRRC8B	Q6P9F7	803 aa		3.54	□□□□□ -1.84
YBX3-210	ENST00000540975	DHRS4L2	Q6PKH6	230 aa		3.54	□□□□□ -1.84
YBX3-210	ENST00000540975	NPSR1	Q6W5P4	371 aa		3.54	□□□□□ -1.84
YBX3-210	ENST00000540975	PGAP1	Q75T13	922 aa		3.54	□□□□□ -1.84
YBX3-210	ENST00000540975	NIPA1	Q7RTP0	329 aa		3.54	□□□□□ -1.84
YBX3-210	ENST00000540975	UBE2J2	Q8N2K1	259 aa		3.54	□□□□□ -1.84

Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms