RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 POU3F4P49335 361 aa12.44□□□□□ -0.42
ACTN1-205ENST00000538545 MMP16P51512 607 aa12.44□□□□□ -0.42
ACTN1-205ENST00000538545 MRPL28Q13084 256 aaKnown RBP12.44□□□□□ -0.42
ACTN1-205ENST00000538545 ENKURQ8TC29 256 aa12.44□□□□□ -0.42
ACTN1-205ENST00000538545 KCNE4Q8WWG9 221 aa12.44□□□□□ -0.42
ACTN1-205ENST00000538545 YIPF5Q969M3 257 aa12.44□□□□□ -0.42
ACTN1-205ENST00000538545 UPRTQ96BW1 309 aa12.44□□□□□ -0.42
ACTN1-205ENST00000538545 AGAP4Q96P64 663 aa12.44□□□□□ -0.42
ACTN1-205ENST00000538545 SLC22A4Q9H015 551 aa12.44□□□□□ -0.42
ACTN1-205ENST00000538545 ABCG5Q9H222 651 aa12.44□□□□□ -0.42
ACTN1-205ENST00000538545 ZMAT3Q9HA38 289 aaKnown RBP12.44□□□□□ -0.42
ACTN1-205ENST00000538545 ABI3Q9P2A4 366 aa12.44□□□□□ -0.42
ACTN1-205ENST00000538545 GJE1A6NN92 205 aa12.43□□□□□ -0.42
ACTN1-205ENST00000538545 SYT7O43581 403 aa12.43□□□□□ -0.42
ACTN1-205ENST00000538545 MSR1P21757 451 aa12.43□□□□□ -0.42
ACTN1-205ENST00000538545 CLDN18P56856 261 aa12.43□□□□□ -0.42
ACTN1-205ENST00000538545 PPIAP62937 165 aaKnown RBP12.43□□□□□ -0.42
ACTN1-205ENST00000538545 GPR176Q14439 515 aa12.43□□□□□ -0.42
ACTN1-205ENST00000538545 RSPO1Q2MKA7 263 aaPredicted RBP12.43□□□□□ -0.42
ACTN1-205ENST00000538545 SLC36A2Q495M3 483 aa12.43□□□□□ -0.42
ACTN1-205ENST00000538545 UBE2NLQ5JXB2 153 aa12.43□□□□□ -0.42
ACTN1-205ENST00000538545 SLC25A25Q6KCM7 469 aa12.43□□□□□ -0.42
ACTN1-205ENST00000538545 OR1J2Q8NGS2 313 aa12.43□□□□□ -0.42
ACTN1-205ENST00000538545 OR13C9Q8NGT0 318 aa12.43□□□□□ -0.42
ACTN1-205ENST00000538545 PHYHIPQ92561 330 aa12.43□□□□□ -0.42
ACTN1-205ENST00000538545 NELFAQ9H3P2 528 aa12.43□□□□□ -0.42
ACTN1-205ENST00000538545 CALHM2Q9HA72 323 aa12.43□□□□□ -0.42
ACTN1-205ENST00000538545 ELF5Q9UKW6 265 aaPredicted RBP12.43□□□□□ -0.42
ACTN1-205ENST00000538545 VAMP5O95183 116 aa12.43□□□□□ -0.42
ACTN1-205ENST00000538545 C2orf76Q3KRA6 126 aa12.43□□□□□ -0.42
ACTN1-205ENST00000538545 ASCL5Q7RTU5 278 aa12.43□□□□□ -0.42
ACTN1-205ENST00000538545 RTN4RL2Q86UN3 420 aa12.43□□□□□ -0.42
ACTN1-205ENST00000538545 TUSC5Q8IXB3 177 aa12.43□□□□□ -0.42
ACTN1-205ENST00000538545 MDS2Q8NDY4 140 aa12.43□□□□□ -0.42
ACTN1-205ENST00000538545 HAVCR2Q8TDQ0 301 aa12.43□□□□□ -0.42
ACTN1-205ENST00000538545 NPRL2Q8WTW4 380 aa12.43□□□□□ -0.42
ACTN1-205ENST00000538545 ITFG2Q969R8 447 aa12.43□□□□□ -0.42
ACTN1-205ENST00000538545 GPR84Q9NQS5 396 aa12.43□□□□□ -0.42
ACTN1-205ENST00000538545 DLL3Q9NYJ7 618 aa12.43□□□□□ -0.42
ACTN1-205ENST00000538545 PLEK2Q9NYT0 353 aa12.43□□□□□ -0.42
ACTN1-205ENST00000538545 FAM240BA0A1B0GVZ2 78 aa12.43□□□□□ -0.42
ACTN1-205ENST00000538545 HLA-DQB1P01920 261 aa12.43□□□□□ -0.42
ACTN1-205ENST00000538545 CSRP1P21291 193 aaKnown RBP12.43□□□□□ -0.42
ACTN1-205ENST00000538545 GUCA1AP43080 201 aaPredicted RBP12.43□□□□□ -0.42
ACTN1-205ENST00000538545 POU4F3Q15319 338 aa12.43□□□□□ -0.42
ACTN1-205ENST00000538545 CEACAM16Q2WEN9 425 aa12.43□□□□□ -0.42
ACTN1-205ENST00000538545 TMEM255AQ5JRV8 349 aa12.43□□□□□ -0.42
ACTN1-205ENST00000538545 PYHIN1Q6K0P9 492 aa12.43□□□□□ -0.42
ACTN1-205ENST00000538545 SIAH3Q8IW03 269 aa12.43□□□□□ -0.42
ACTN1-205ENST00000538545 OR52N4Q8NGI2 321 aa12.43□□□□□ -0.42
ACTN1-205ENST00000538545 OR52I2Q8NH67 350 aa12.43□□□□□ -0.42
ACTN1-205ENST00000538545 AKR7LQ8NHP1 331 aa12.43□□□□□ -0.42
ACTN1-205ENST00000538545 SETD6Q8TBK2 473 aa12.43□□□□□ -0.42
ACTN1-205ENST00000538545 UBASH3BQ8TF42 649 aa12.43□□□□□ -0.42
ACTN1-205ENST00000538545 A0A1B0GTI1 187 aa12.42□□□□□ -0.42
ACTN1-205ENST00000538545 MT-ND4P03905 459 aa12.42□□□□□ -0.42
ACTN1-205ENST00000538545 RAF1P04049 648 aa12.42□□□□□ -0.42
ACTN1-205ENST00000538545 CD2P06729 351 aa12.42□□□□□ -0.42
ACTN1-205ENST00000538545 CCR6P51684 374 aa12.42□□□□□ -0.42
ACTN1-205ENST00000538545 RIN1Q13671 783 aa12.42□□□□□ -0.42
ACTN1-205ENST00000538545 C20orf196Q8IYI0 205 aa12.42□□□□□ -0.42
ACTN1-205ENST00000538545 ELMOD2Q8IZ81 293 aa12.42□□□□□ -0.42
ACTN1-205ENST00000538545 OR4D6Q8NGJ1 314 aa12.42□□□□□ -0.42
ACTN1-205ENST00000538545 FAM46BQ96A09 425 aa12.42□□□□□ -0.42
ACTN1-205ENST00000538545 RNF170Q96K19 258 aa12.42□□□□□ -0.42
ACTN1-205ENST00000538545 STEAP1Q9UHE8 339 aa12.42□□□□□ -0.42
ACTN1-205ENST00000538545 FOXJ3Q9UPW0 622 aa12.42□□□□□ -0.42
ACTN1-205ENST00000538545 ZZEF1O43149 2961 aa12.42□□□□□ -0.42
ACTN1-205ENST00000538545 TRAV6A0A075B6T7 132 aa12.42□□□□□ -0.42
ACTN1-205ENST00000538545 HSPB2A8KAH6 182 aa12.42□□□□□ -0.42
ACTN1-205ENST00000538545 UBL3O95164 117 aa12.42□□□□□ -0.42
ACTN1-205ENST00000538545 PTH2RP49190 550 aa12.42□□□□□ -0.42
ACTN1-205ENST00000538545 GUCA2AQ02747 115 aa12.42□□□□□ -0.42
ACTN1-205ENST00000538545 HGFACQ04756 655 aa12.42□□□□□ -0.42
ACTN1-205ENST00000538545 HSPB2Q16082 182 aa12.42□□□□□ -0.42
ACTN1-205ENST00000538545 DEFB109BQ30KR1 87 aa12.42□□□□□ -0.42
ACTN1-205ENST00000538545 CCDC92Q53HC0 331 aaPredicted RBP12.42□□□□□ -0.42
ACTN1-205ENST00000538545 TSPO2Q5TGU0 170 aa12.42□□□□□ -0.42
ACTN1-205ENST00000538545 RSBN1Q5VWQ0 802 aaPredicted RBP12.42□□□□□ -0.42
ACTN1-205ENST00000538545 ZNF774Q6NX45 483 aa12.42□□□□□ -0.42
ACTN1-205ENST00000538545 EXO5Q9H790 373 aa12.42□□□□□ -0.42
ACTN1-205ENST00000538545 A0A096LPE4 126 aa12.41□□□□□ -0.42
ACTN1-205ENST00000538545 A0A1W2PPZ6 126 aa12.41□□□□□ -0.42
ACTN1-205ENST00000538545 NME2P1O60361 137 aa12.41□□□□□ -0.42
ACTN1-205ENST00000538545 FAM157BP0CG42 384 aa12.41□□□□□ -0.42
ACTN1-205ENST00000538545 IGFBP3P17936 291 aaPredicted RBP12.41□□□□□ -0.42
ACTN1-205ENST00000538545 NME2P22392 152 aa12.41□□□□□ -0.42
ACTN1-205ENST00000538545 BTCP35070 178 aa12.41□□□□□ -0.42
ACTN1-205ENST00000538545 PSMA6P60900 246 aaKnown RBP12.41□□□□□ -0.42
ACTN1-205ENST00000538545 ZNF766Q5HY98 468 aa12.41□□□□□ -0.42
ACTN1-205ENST00000538545 TMEM69Q5SWH9 247 aa12.41□□□□□ -0.42
ACTN1-205ENST00000538545 C10orf128Q5T292 105 aa12.41□□□□□ -0.42
ACTN1-205ENST00000538545 DEGS2Q6QHC5 323 aa12.41□□□□□ -0.42
ACTN1-205ENST00000538545 HDDC2Q7Z4H3 204 aa12.41□□□□□ -0.42
ACTN1-205ENST00000538545 OR2AE1Q8NHA4 323 aa12.41□□□□□ -0.42
ACTN1-205ENST00000538545 FAM3DQ96BQ1 224 aa12.41□□□□□ -0.42
ACTN1-205ENST00000538545 MFRPQ9BY79 579 aa12.41□□□□□ -0.42
ACTN1-205ENST00000538545 BEX1Q9HBH7 125 aa12.41□□□□□ -0.42
ACTN1-205ENST00000538545 ZNF275Q9NSD4 429 aaPredicted RBP12.41□□□□□ -0.42
ACTN1-205ENST00000538545 RBFOX1Q9NWB1 397 aaKnown RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms