RNA–Protein interactions for RNA: ENST00000538120.5

CLIP1-210, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 2,472 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-210ENST00000538120 NHLRC3Q5JS37 347 aa9.57□□□□□ -0.88
CLIP1-210ENST00000538120 ZNF468Q5VIY5 522 aaPredicted RBP9.57□□□□□ -0.88
CLIP1-210ENST00000538120 C6orf15Q6UXA7 325 aaPredicted RBP9.57□□□□□ -0.88
CLIP1-210ENST00000538120 LRRN1Q6UXK5 716 aa9.57□□□□□ -0.88
CLIP1-210ENST00000538120 ZNF704Q6ZNC4 412 aaPredicted RBP9.57□□□□□ -0.88
CLIP1-210ENST00000538120 FCRLAQ7L513 359 aa9.57□□□□□ -0.88
CLIP1-210ENST00000538120 RAB11FIP2Q7L804 512 aa9.57□□□□□ -0.88
CLIP1-210ENST00000538120 RPS19BP1Q86WX3 136 aaKnown RBP9.57□□□□□ -0.88
CLIP1-210ENST00000538120 ZNF433Q8N7K0 673 aaPredicted RBP9.57□□□□□ -0.88
CLIP1-210ENST00000538120 OR4K17Q8NGC6 315 aa9.57□□□□□ -0.88
CLIP1-210ENST00000538120 OR52B4Q8NGK2 314 aa9.57□□□□□ -0.88
CLIP1-210ENST00000538120 OR5AK2Q8NH90 309 aa9.57□□□□□ -0.88
CLIP1-210ENST00000538120 PAQR8Q8TEZ7 354 aa9.57□□□□□ -0.88
CLIP1-210ENST00000538120 CT55Q8WUE5 264 aa9.57□□□□□ -0.88
CLIP1-210ENST00000538120 C5orf34Q96MH7 638 aa9.57□□□□□ -0.88
CLIP1-210ENST00000538120 ACTR6Q9GZN1 396 aa9.57□□□□□ -0.88
CLIP1-210ENST00000538120 ELOVL3Q9HB03 270 aa9.57□□□□□ -0.88
CLIP1-210ENST00000538120 AKAP7Q9P0M2 348 aaPredicted RBP9.57□□□□□ -0.88
CLIP1-210ENST00000538120 TCFL5Q9UL49 500 aa9.57□□□□□ -0.88
CLIP1-210ENST00000538120 NPIPA1Q9UND3 350 aa9.57□□□□□ -0.88
CLIP1-210ENST00000538120 GPR179Q6PRD1 2367 aa9.56□□□□□ -0.88
CLIP1-210ENST00000538120 A0A1W2PNR3 127 aa9.56□□□□□ -0.88
CLIP1-210ENST00000538120 LGALS8O00214 317 aa9.56□□□□□ -0.88
CLIP1-210ENST00000538120 IL2RAP01589 272 aa9.56□□□□□ -0.88
CLIP1-210ENST00000538120 SPARCP09486 303 aa9.56□□□□□ -0.88
CLIP1-210ENST00000538120 DCTDP32321 178 aa9.56□□□□□ -0.88
CLIP1-210ENST00000538120 SSR4P51571 173 aa9.56□□□□□ -0.88
CLIP1-210ENST00000538120 POLR2GP62487 172 aaKnown RBP eCLIP9.56□□□□□ -0.88
CLIP1-210ENST00000538120 OC90Q02509 493 aaPredicted RBP9.56□□□□□ -0.88
CLIP1-210ENST00000538120 ROM1Q03395 351 aa9.56□□□□□ -0.88
CLIP1-210ENST00000538120 LINC00303Q3SY05 128 aa9.56□□□□□ -0.88
CLIP1-210ENST00000538120 UBE2NLQ5JXB2 153 aa9.56□□□□□ -0.88
CLIP1-210ENST00000538120 CDCP2Q5VXM1 449 aa9.56□□□□□ -0.88
CLIP1-210ENST00000538120 C3orf33Q6P1S2 294 aa9.56□□□□□ -0.88
CLIP1-210ENST00000538120 FDX2Q6P4F2 183 aa9.56□□□□□ -0.88
CLIP1-210ENST00000538120 MDGA2Q7Z553 956 aa9.56□□□□□ -0.88
CLIP1-210ENST00000538120 UXS1Q8NBZ7 420 aa9.56□□□□□ -0.88
CLIP1-210ENST00000538120 OR10AC1Q8NH08 325 aa9.56□□□□□ -0.88
CLIP1-210ENST00000538120 NSMAFQ92636 917 aa9.56□□□□□ -0.88
CLIP1-210ENST00000538120 ZNF845Q96IR2 970 aaPredicted RBP9.56□□□□□ -0.88
CLIP1-210ENST00000538120 C4orf45Q96LM5 186 aa9.56□□□□□ -0.88
CLIP1-210ENST00000538120 C7orf50Q9BRJ6 194 aaKnown RBP9.56□□□□□ -0.88
CLIP1-210ENST00000538120 C12orf4Q9NQ89 552 aa9.56□□□□□ -0.88
CLIP1-210ENST00000538120 SDHAF2Q9NX18 166 aa9.56□□□□□ -0.88
CLIP1-210ENST00000538120 PISDQ9UG56 409 aa9.56□□□□□ -0.88
CLIP1-210ENST00000538120 PCSK5Q92824 1860 aa9.56□□□□□ -0.88
CLIP1-210ENST00000538120 hCG_1807616A0A1W2PRN6 198 aa9.56□□□□□ -0.88
CLIP1-210ENST00000538120 PLSCR5A0PG75 271 aa9.56□□□□□ -0.88
CLIP1-210ENST00000538120 C9orf172C9J069 976 aa9.56□□□□□ -0.88
CLIP1-210ENST00000538120 TGM6O95932 706 aa9.56□□□□□ -0.88
CLIP1-210ENST00000538120 PNPP00491 289 aa9.56□□□□□ -0.88
CLIP1-210ENST00000538120 IGHEP01854 428 aa9.56□□□□□ -0.88
CLIP1-210ENST00000538120 TCN2P20062 427 aa9.56□□□□□ -0.88
CLIP1-210ENST00000538120 KLK2P20151 261 aa9.56□□□□□ -0.88
CLIP1-210ENST00000538120 ADAM8P78325 824 aa9.56□□□□□ -0.88
CLIP1-210ENST00000538120 CLN3Q13286 438 aa9.56□□□□□ -0.88
CLIP1-210ENST00000538120 WDR38Q5JTN6 314 aa9.56□□□□□ -0.88
CLIP1-210ENST00000538120 SLC18B1Q6NT16 456 aa9.56□□□□□ -0.88
CLIP1-210ENST00000538120 ALKAL2Q6UX46 152 aa9.56□□□□□ -0.88
CLIP1-210ENST00000538120 C3P1Q6ZMU1 363 aa9.56□□□□□ -0.88
CLIP1-210ENST00000538120 NAXDQ8IW45 347 aa9.56□□□□□ -0.88
CLIP1-210ENST00000538120 ADPRHL1Q8NDY3 354 aa9.56□□□□□ -0.88
CLIP1-210ENST00000538120 SLC26A10Q8NG04 563 aa9.56□□□□□ -0.88
CLIP1-210ENST00000538120 RNF128Q8TEB7 428 aa9.56□□□□□ -0.88
CLIP1-210ENST00000538120 ASB17Q8WXJ9 295 aa9.56□□□□□ -0.88
CLIP1-210ENST00000538120 TAAR9Q96RI9 348 aa9.56□□□□□ -0.88
CLIP1-210ENST00000538120 DMRTA2Q96SC8 542 aa9.56□□□□□ -0.88
CLIP1-210ENST00000538120 ABHD6Q9BV23 337 aa9.56□□□□□ -0.88
CLIP1-210ENST00000538120 EMC6Q9BV81 110 aa9.56□□□□□ -0.88
CLIP1-210ENST00000538120 NOX3Q9HBY0 568 aa9.56□□□□□ -0.88
CLIP1-210ENST00000538120 TRBV5-7A0A0A0MS05 114 aa9.55□□□□□ -0.88
CLIP1-210ENST00000538120 HSPB2A8KAH6 182 aa9.55□□□□□ -0.88
CLIP1-210ENST00000538120 CTDSPLO15194 276 aa9.55□□□□□ -0.88
CLIP1-210ENST00000538120 NUPL2O15504 423 aaKnown RBP9.55□□□□□ -0.88
CLIP1-210ENST00000538120 RAMP1O60894 148 aa9.55□□□□□ -0.88
CLIP1-210ENST00000538120 KHDRBS3O75525 346 aaKnown RBP9.55□□□□□ -0.88
CLIP1-210ENST00000538120 SIX6O95475 246 aa9.55□□□□□ -0.88
CLIP1-210ENST00000538120 ADH6P28332 368 aa9.55□□□□□ -0.88
CLIP1-210ENST00000538120 OTX2P32243 289 aa9.55□□□□□ -0.88
CLIP1-210ENST00000538120 BIDP55957 195 aa9.55□□□□□ -0.88
CLIP1-210ENST00000538120 HSPB2Q16082 182 aa9.55□□□□□ -0.88
CLIP1-210ENST00000538120 PCK2Q16822 640 aa9.55□□□□□ -0.88
CLIP1-210ENST00000538120 Q3ZCU0 254 aa9.55□□□□□ -0.88
CLIP1-210ENST00000538120 Q499Y3 187 aa9.55□□□□□ -0.88
CLIP1-210ENST00000538120 TEX30Q5JUR7 227 aa9.55□□□□□ -0.88
CLIP1-210ENST00000538120 RAB12Q6IQ22 244 aa9.55□□□□□ -0.88
CLIP1-210ENST00000538120 ZNF679Q8IYX0 411 aa9.55□□□□□ -0.88
CLIP1-210ENST00000538120 OR51A4Q8NGJ6 313 aa9.55□□□□□ -0.88
CLIP1-210ENST00000538120 PPP1R14AQ96A00 147 aa9.55□□□□□ -0.88
CLIP1-210ENST00000538120 GNRHR2Q96P88 292 aa9.55□□□□□ -0.88
CLIP1-210ENST00000538120 OR5B2Q96R09 309 aa9.55□□□□□ -0.88
CLIP1-210ENST00000538120 MRPL13Q9BYD1 178 aaKnown RBP9.55□□□□□ -0.88
CLIP1-210ENST00000538120 STRADBQ9C0K7 418 aa9.55□□□□□ -0.88
CLIP1-210ENST00000538120 PTGES2Q9H7Z7 377 aa9.55□□□□□ -0.88
CLIP1-210ENST00000538120 LIN7BQ9HAP6 207 aa9.55□□□□□ -0.88
CLIP1-210ENST00000538120 RPH3AQ9Y2J0 694 aaPredicted RBP9.55□□□□□ -0.88
CLIP1-210ENST00000538120 MFSD2BA6NFX1 497 aa9.55□□□□□ -0.88
CLIP1-210ENST00000538120 IFITM5A6NNB3 132 aa9.55□□□□□ -0.88
CLIP1-210ENST00000538120 G3V3Y1 287 aa9.55□□□□□ -0.88
CLIP1-210ENST00000538120 L7N2F9 121 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms