RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 ARG1P05089 322 aa4.9□□□□□ -1.62
PTPRD-213ENST00000537002 APODP05090 189 aa4.9□□□□□ -1.62
PTPRD-213ENST00000537002 GPX4P36969 197 aaPredicted RBP4.9□□□□□ -1.62
PTPRD-213ENST00000537002 RPL29P47914 159 aaKnown RBP4.9□□□□□ -1.62
PTPRD-213ENST00000537002 GPNMBQ14956 572 aa4.9□□□□□ -1.62
PTPRD-213ENST00000537002 ELOCQ15369 112 aa4.9□□□□□ -1.62
PTPRD-213ENST00000537002 DNM1P46Q6ZS02 220 aa4.9□□□□□ -1.62
PTPRD-213ENST00000537002 DPY19L4Q7Z388 723 aa4.9□□□□□ -1.62
PTPRD-213ENST00000537002 ABHD12BQ7Z5M8 362 aaPredicted RBP4.9□□□□□ -1.62
PTPRD-213ENST00000537002 LILRA3Q8N6C8 439 aaPredicted RBP4.9□□□□□ -1.62
PTPRD-213ENST00000537002 CSNK1A1LQ8N752 337 aa4.9□□□□□ -1.62
PTPRD-213ENST00000537002 OR52R1Q8NGF1 315 aa4.9□□□□□ -1.62
PTPRD-213ENST00000537002 OR5D18Q8NGL1 313 aa4.9□□□□□ -1.62
PTPRD-213ENST00000537002 RGP1Q92546 391 aaPredicted RBP4.9□□□□□ -1.62
PTPRD-213ENST00000537002 SMIM8Q96KF7 97 aa4.9□□□□□ -1.62
PTPRD-213ENST00000537002 TAS2R4Q9NYW5 299 aa4.9□□□□□ -1.62
PTPRD-213ENST00000537002 DKKL1Q9UK85 242 aa4.9□□□□□ -1.62
PTPRD-213ENST00000537002 COL4A4P53420 1690 aaPredicted RBP4.9□□□□□ -1.62
PTPRD-213ENST00000537002 A0A0G2JK05 382 aa4.9□□□□□ -1.62
PTPRD-213ENST00000537002 CD300LBA8K4G0 201 aa4.9□□□□□ -1.62
PTPRD-213ENST00000537002 CEBPZOSA8MTT3 80 aa4.9□□□□□ -1.62
PTPRD-213ENST00000537002 TMEM229AB2RXF0 380 aa4.9□□□□□ -1.62
PTPRD-213ENST00000537002 ADPRHP54922 357 aa4.9□□□□□ -1.62
PTPRD-213ENST00000537002 TAS2R46P59540 309 aa4.9□□□□□ -1.62
PTPRD-213ENST00000537002 ZNF74Q16587 644 aa4.9□□□□□ -1.62
PTPRD-213ENST00000537002 RPUSD3Q6P087 351 aaKnown RBP4.9□□□□□ -1.62
PTPRD-213ENST00000537002 STAC2Q6ZMT1 411 aa4.9□□□□□ -1.62
PTPRD-213ENST00000537002 OR14L1PQ8NHC6 308 aa4.9□□□□□ -1.62
PTPRD-213ENST00000537002 FGF11Q92914 225 aa4.9□□□□□ -1.62
PTPRD-213ENST00000537002 AMDHD1Q96NU7 426 aa4.9□□□□□ -1.62
PTPRD-213ENST00000537002 NKX2-4Q9H2Z4 354 aa4.9□□□□□ -1.62
PTPRD-213ENST00000537002 PARD6AQ9NPB6 346 aa4.9□□□□□ -1.62
PTPRD-213ENST00000537002 OSGIN2Q9Y236 505 aa4.9□□□□□ -1.62
PTPRD-213ENST00000537002 YBX2Q9Y2T7 364 aaKnown RBP4.9□□□□□ -1.62
PTPRD-213ENST00000537002 DOCK4Q8N1I0 1966 aa4.9□□□□□ -1.62
PTPRD-213ENST00000537002 EDDM13A0A1B0GTR0 161 aa4.9□□□□□ -1.62
PTPRD-213ENST00000537002 M0R143 59 aa4.9□□□□□ -1.62
PTPRD-213ENST00000537002 GCGP01275 180 aa4.9□□□□□ -1.62
PTPRD-213ENST00000537002 RPS18P62269 152 aaKnown RBP4.9□□□□□ -1.62
PTPRD-213ENST00000537002 OGFOD3Q6PK18 319 aa4.9□□□□□ -1.62
PTPRD-213ENST00000537002 CD300LGQ6UXG3 332 aa4.9□□□□□ -1.62
PTPRD-213ENST00000537002 ZNF683Q8IZ20 524 aa4.9□□□□□ -1.62
PTPRD-213ENST00000537002 MORN4Q8NDC4 146 aa4.9□□□□□ -1.62
PTPRD-213ENST00000537002 OR51Q1Q8NH59 317 aa4.9□□□□□ -1.62
PTPRD-213ENST00000537002 WNT2BQ93097 391 aa4.9□□□□□ -1.62
PTPRD-213ENST00000537002 SHDQ96IW2 340 aa4.9□□□□□ -1.62
PTPRD-213ENST00000537002 MESP1Q9BRJ9 268 aa4.9□□□□□ -1.62
PTPRD-213ENST00000537002 GLIPR2Q9H4G4 154 aa4.9□□□□□ -1.62
PTPRD-213ENST00000537002 UBQLN4Q9NRR5 601 aa4.9□□□□□ -1.62
PTPRD-213ENST00000537002 C2orf42Q9NWW7 574 aa4.9□□□□□ -1.62
PTPRD-213ENST00000537002 INSL5Q9Y5Q6 135 aa4.9□□□□□ -1.62
PTPRD-213ENST00000537002 A0A087WWC5 75 aa4.9□□□□□ -1.63
PTPRD-213ENST00000537002 A0A1B0GW64 132 aa4.9□□□□□ -1.63
PTPRD-213ENST00000537002 PPP5D1E7EU14 171 aa4.9□□□□□ -1.63
PTPRD-213ENST00000537002 C1orf105O95561 183 aa4.9□□□□□ -1.63
PTPRD-213ENST00000537002 MMP7P09237 267 aaPredicted RBP4.9□□□□□ -1.63
PTPRD-213ENST00000537002 ADH5P11766 374 aa4.9□□□□□ -1.63
PTPRD-213ENST00000537002 PGCP20142 388 aa4.9□□□□□ -1.63
PTPRD-213ENST00000537002 MELKQ14680 651 aa4.9□□□□□ -1.63
PTPRD-213ENST00000537002 LY6G5CQ5SRR4 150 aa4.9□□□□□ -1.63
PTPRD-213ENST00000537002 GGNBP1Q5YKI7 109 aa4.9□□□□□ -1.63
PTPRD-213ENST00000537002 C9orf40Q8IXQ3 194 aa4.9□□□□□ -1.63
PTPRD-213ENST00000537002 NUBPLQ8TB37 319 aa4.9□□□□□ -1.63
PTPRD-213ENST00000537002 CDCA3Q99618 268 aaPredicted RBP4.9□□□□□ -1.63
PTPRD-213ENST00000537002 CUTCQ9NTM9 273 aa4.9□□□□□ -1.63
PTPRD-213ENST00000537002 MRPS28Q9Y2Q9 187 aaKnown RBP4.9□□□□□ -1.63
PTPRD-213ENST00000537002 IGLV3-16A0A075B6K0 115 aa4.9□□□□□ -1.63
PTPRD-213ENST00000537002 MBLAC1A4D2B0 266 aaPredicted RBP4.9□□□□□ -1.63
PTPRD-213ENST00000537002 MSTNO14793 375 aa4.9□□□□□ -1.63
PTPRD-213ENST00000537002 CST4P01036 141 aa4.9□□□□□ -1.63
PTPRD-213ENST00000537002 IGLV3-27P01718 113 aa4.9□□□□□ -1.63
PTPRD-213ENST00000537002 VAMP3Q15836 100 aa4.9□□□□□ -1.63
PTPRD-213ENST00000537002 TAF9Q16594 264 aa4.9□□□□□ -1.63
PTPRD-213ENST00000537002 GUK1Q16774 197 aa4.9□□□□□ -1.63
PTPRD-213ENST00000537002 KREMEN2Q8NCW0 462 aa4.9□□□□□ -1.63
PTPRD-213ENST00000537002 OR5AP2Q8NGF4 316 aa4.9□□□□□ -1.63
PTPRD-213ENST00000537002 SECTM1Q8WVN6 248 aa4.9□□□□□ -1.63
PTPRD-213ENST00000537002 TLNRD1Q9H1K6 362 aa4.9□□□□□ -1.63
PTPRD-213ENST00000537002 ZDHHC8Q9ULC8 765 aa4.9□□□□□ -1.63
PTPRD-213ENST00000537002 A4GNTQ9UNA3 340 aa4.9□□□□□ -1.63
PTPRD-213ENST00000537002 OR52A4PA6NMU1 304 aa4.9□□□□□ -1.63
PTPRD-213ENST00000537002 MBTPS2O43462 519 aa4.9□□□□□ -1.63
PTPRD-213ENST00000537002 YIF1AO95070 293 aa4.9□□□□□ -1.63
PTPRD-213ENST00000537002 MGST1P10620 155 aaKnown RBP4.9□□□□□ -1.63
PTPRD-213ENST00000537002 PCP4P48539 62 aa4.9□□□□□ -1.63
PTPRD-213ENST00000537002 DHPSP49366 369 aaPredicted RBP4.9□□□□□ -1.63
PTPRD-213ENST00000537002 GSK3AP49840 483 aa4.9□□□□□ -1.63
PTPRD-213ENST00000537002 RPS15AP62244 130 aaKnown RBP4.9□□□□□ -1.63
PTPRD-213ENST00000537002 TOMM20LQ6UXN7 152 aa4.9□□□□□ -1.63
PTPRD-213ENST00000537002 MCEMP1Q8IX19 187 aa4.9□□□□□ -1.63
PTPRD-213ENST00000537002 PRR22Q8IZ63 422 aa4.9□□□□□ -1.63
PTPRD-213ENST00000537002 WFIKKN2Q8TEU8 576 aa4.9□□□□□ -1.63
PTPRD-213ENST00000537002 MITD1Q8WV92 249 aa4.9□□□□□ -1.63
PTPRD-213ENST00000537002 NINJ1Q92982 152 aa4.9□□□□□ -1.63
PTPRD-213ENST00000537002 PRRG4Q9BZD6 226 aa4.9□□□□□ -1.63
PTPRD-213ENST00000537002 SEMA6CQ9H3T2 930 aa4.9□□□□□ -1.63
PTPRD-213ENST00000537002 ENY2Q9NPA8 101 aa4.9□□□□□ -1.63
PTPRD-213ENST00000537002 PRAMEF27A3QJZ7 478 aa4.9□□□□□ -1.63
PTPRD-213ENST00000537002 OR5H15A6NDH6 313 aa4.9□□□□□ -1.63
PTPRD-213ENST00000537002 OR5H1A6NKK0 313 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms