RNA–Protein interactions for RNA: ENST00000536301.1

CHD4-205, Transcript of chromodomain helicase DNA binding protein 4, human

TSL 3

Gene CHD4, Length 107 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD4-205	ENST00000536301	ANP32D	O95626	131 aa		4.24	□□□□□ -1.73
CHD4-205	ENST00000536301	FSTL3	O95633	263 aa		4.24	□□□□□ -1.73
CHD4-205	ENST00000536301	LIPF	P07098	398 aa		4.24	□□□□□ -1.73
CHD4-205	ENST00000536301	ZCCHC18	P0CG32	403 aa		4.24	□□□□□ -1.73
CHD4-205	ENST00000536301	ETS2	P15036	469 aa		4.24	□□□□□ -1.73
CHD4-205	ENST00000536301	RAC2	P15153	192 aa		4.24	□□□□□ -1.73
CHD4-205	ENST00000536301	AMY2B	P19961	511 aa		4.24	□□□□□ -1.73
CHD4-205	ENST00000536301	BGN	P21810	368 aa		4.24	□□□□□ -1.73
CHD4-205	ENST00000536301	GATA4	P43694	442 aa		4.24	□□□□□ -1.73
CHD4-205	ENST00000536301	SRP9	P49458	86 aa	Known RBP	4.24	□□□□□ -1.73
CHD4-205	ENST00000536301	NPY4R	P50391	375 aa		4.24	□□□□□ -1.73
CHD4-205	ENST00000536301	BMX	P51813	675 aa		4.24	□□□□□ -1.73
CHD4-205	ENST00000536301	ABCE1	P61221	599 aa	Known RBP	4.24	□□□□□ -1.73
CHD4-205	ENST00000536301	CDK6	Q00534	326 aa		4.24	□□□□□ -1.73
CHD4-205	ENST00000536301	GUCY1A3	Q02108	690 aa		4.24	□□□□□ -1.73
CHD4-205	ENST00000536301	LRRC74A	Q0VAA2	488 aa		4.24	□□□□□ -1.73
CHD4-205	ENST00000536301	DUSP7	Q16829	419 aa		4.24	□□□□□ -1.73
CHD4-205	ENST00000536301	CDON	Q4KMG0	1287 aa		4.24	□□□□□ -1.73
CHD4-205	ENST00000536301	CCDC92	Q53HC0	331 aa	Predicted RBP	4.24	□□□□□ -1.73
CHD4-205	ENST00000536301	C6orf10	Q5SRN2	563 aa		4.24	□□□□□ -1.73
CHD4-205	ENST00000536301	GCNT6	Q5T4J0	391 aa		4.24	□□□□□ -1.73
CHD4-205	ENST00000536301	CD276	Q5ZPR3	534 aa		4.24	□□□□□ -1.73
CHD4-205	ENST00000536301	HCP5	Q6MZN7	132 aa		4.24	□□□□□ -1.73
CHD4-205	ENST00000536301	OGFOD2	Q6N063	350 aa		4.24	□□□□□ -1.73
CHD4-205	ENST00000536301	UNQ6126/PRO20091	Q6UXV3	157 aa		4.24	□□□□□ -1.73
CHD4-205	ENST00000536301	FBXW12	Q6X9E4	464 aa		4.24	□□□□□ -1.73
CHD4-205	ENST00000536301	RNF144B	Q7Z419	303 aa		4.24	□□□□□ -1.73
CHD4-205	ENST00000536301	FAM90A1	Q86YD7	464 aa		4.24	□□□□□ -1.73
CHD4-205	ENST00000536301	NKAIN4	Q8IVV8	208 aa		4.24	□□□□□ -1.73
CHD4-205	ENST00000536301	SLC30A8	Q8IWU4	369 aa		4.24	□□□□□ -1.73
CHD4-205	ENST00000536301	ALDH16A1	Q8IZ83	802 aa		4.24	□□□□□ -1.73
CHD4-205	ENST00000536301	C1orf87	Q8N0U7	546 aa		4.24	□□□□□ -1.73
CHD4-205	ENST00000536301	PNLDC1	Q8NA58	520 aa	Known RBP	4.24	□□□□□ -1.73
CHD4-205	ENST00000536301	LY6G5B	Q8NDX9	201 aa		4.24	□□□□□ -1.73
CHD4-205	ENST00000536301	OR4F17	Q8NGA8	305 aa		4.24	□□□□□ -1.73
CHD4-205	ENST00000536301	OR4C13	Q8NGP0	309 aa		4.24	□□□□□ -1.73
CHD4-205	ENST00000536301	OR13G1	Q8NGZ3	307 aa		4.24	□□□□□ -1.73
CHD4-205	ENST00000536301	OR2T6	Q8NHC8	308 aa		4.24	□□□□□ -1.73
CHD4-205	ENST00000536301		Q8TCH9	128 aa		4.24	□□□□□ -1.73
CHD4-205	ENST00000536301	PIFO	Q8TCI5	191 aa		4.24	□□□□□ -1.73
CHD4-205	ENST00000536301	ADAMTS16	Q8TE57	1224 aa		4.24	□□□□□ -1.73
CHD4-205	ENST00000536301	UBLCP1	Q8WVY7	318 aa	Predicted RBP	4.24	□□□□□ -1.73
CHD4-205	ENST00000536301	GTF2H4	Q92759	462 aa		4.24	□□□□□ -1.73
CHD4-205	ENST00000536301	PTP4A1	Q93096	173 aa		4.24	□□□□□ -1.73
CHD4-205	ENST00000536301	SEH1L	Q96EE3	360 aa		4.24	□□□□□ -1.73
CHD4-205	ENST00000536301	ZIM3	Q96PE6	472 aa		4.24	□□□□□ -1.73
CHD4-205	ENST00000536301	OR4F4	Q96R69	305 aa		4.24	□□□□□ -1.73
CHD4-205	ENST00000536301	NKX3-1	Q99801	234 aa	Predicted RBP	4.24	□□□□□ -1.73
CHD4-205	ENST00000536301	SSX3	Q99909	188 aa		4.24	□□□□□ -1.73
CHD4-205	ENST00000536301	ECSIT	Q9BQ95	431 aa		4.24	□□□□□ -1.73
CHD4-205	ENST00000536301	ZNF426	Q9BUY5	554 aa		4.24	□□□□□ -1.73
CHD4-205	ENST00000536301	RAD21L1	Q9H4I0	556 aa		4.24	□□□□□ -1.73
CHD4-205	ENST00000536301	POLE4	Q9NR33	117 aa		4.24	□□□□□ -1.73
CHD4-205	ENST00000536301	INPP5E	Q9NRR6	644 aa		4.24	□□□□□ -1.73
CHD4-205	ENST00000536301	INIP	Q9NRY2	104 aa		4.24	□□□□□ -1.73
CHD4-205	ENST00000536301	ADA2	Q9NZK5	511 aa		4.24	□□□□□ -1.73
CHD4-205	ENST00000536301	ERVK-18	Q9QC07	812 aa		4.24	□□□□□ -1.73
CHD4-205	ENST00000536301	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	4.24	□□□□□ -1.73
CHD4-205	ENST00000536301	NDRG4	Q9ULP0	352 aa	Known RBP	4.24	□□□□□ -1.73
CHD4-205	ENST00000536301	SLC7A7	Q9UM01	511 aa		4.24	□□□□□ -1.73
CHD4-205	ENST00000536301	RAP2C	Q9Y3L5	183 aa		4.24	□□□□□ -1.73
CHD4-205	ENST00000536301	MAB21L2	Q9Y586	359 aa		4.24	□□□□□ -1.73
CHD4-205	ENST00000536301	TIMM10B	Q9Y5J6	103 aa		4.24	□□□□□ -1.73
CHD4-205	ENST00000536301	DYNC1H1	Q14204	4646 aa	Known RBP	4.23	□□□□□ -1.73
CHD4-205	ENST00000536301		A0A1B0GVI7	797 aa		4.23	□□□□□ -1.73
CHD4-205	ENST00000536301	TMEM247	A6NEH6	219 aa		4.23	□□□□□ -1.73
CHD4-205	ENST00000536301	OR6C6	A6NF89	314 aa		4.23	□□□□□ -1.73
CHD4-205	ENST00000536301	OOEP	A6NGQ2	149 aa		4.23	□□□□□ -1.73
CHD4-205	ENST00000536301	LRRC30	A6NM36	301 aa		4.23	□□□□□ -1.73
CHD4-205	ENST00000536301	CENPBD1	B2RD01	187 aa		4.23	□□□□□ -1.73
CHD4-205	ENST00000536301	C5orf58	C9J3I9	102 aa		4.23	□□□□□ -1.73
CHD4-205	ENST00000536301	FBP2	O00757	339 aa		4.23	□□□□□ -1.73
CHD4-205	ENST00000536301	SGCE	O43556	437 aa		4.23	□□□□□ -1.73
CHD4-205	ENST00000536301	TYROBP	O43914	113 aa		4.23	□□□□□ -1.73
CHD4-205	ENST00000536301	HIST1H2AB	P04908	130 aa		4.23	□□□□□ -1.73
CHD4-205	ENST00000536301	SERPINE1	P05121	402 aa		4.23	□□□□□ -1.73
CHD4-205	ENST00000536301	TSPAN19	P0C672	248 aa		4.23	□□□□□ -1.73
CHD4-205	ENST00000536301	CCDC159	P0C7I6	412 aa		4.23	□□□□□ -1.73
CHD4-205	ENST00000536301	COX5B	P10606	129 aa		4.23	□□□□□ -1.73
CHD4-205	ENST00000536301	IRF2	P14316	349 aa		4.23	□□□□□ -1.73
CHD4-205	ENST00000536301	TNFRSF1B	P20333	461 aa		4.23	□□□□□ -1.73
CHD4-205	ENST00000536301	MSR1	P21757	451 aa		4.23	□□□□□ -1.73
CHD4-205	ENST00000536301	FPR3	P25089	353 aa		4.23	□□□□□ -1.73
CHD4-205	ENST00000536301	CD200	P41217	278 aa		4.23	□□□□□ -1.73
CHD4-205	ENST00000536301	RPL14	P50914	215 aa	Known RBP	4.23	□□□□□ -1.73
CHD4-205	ENST00000536301	EMX1	Q04741	257 aa	Predicted RBP	4.23	□□□□□ -1.73
CHD4-205	ENST00000536301	EGFEM1P	Q0D2K5	195 aa		4.23	□□□□□ -1.73
CHD4-205	ENST00000536301	SCARB2	Q14108	478 aa		4.23	□□□□□ -1.73
CHD4-205	ENST00000536301	OR8B8	Q15620	311 aa		4.23	□□□□□ -1.73
CHD4-205	ENST00000536301	WHAMMP3	Q1A5X7	153 aa		4.23	□□□□□ -1.73
CHD4-205	ENST00000536301	RSPO1	Q2MKA7	263 aa	Predicted RBP	4.23	□□□□□ -1.73
CHD4-205	ENST00000536301	TCTEX1D4	Q5JR98	221 aa		4.23	□□□□□ -1.73
CHD4-205	ENST00000536301	BEND6	Q5SZJ8	279 aa	Predicted RBP	4.23	□□□□□ -1.73
CHD4-205	ENST00000536301	REEP3	Q6NUK4	255 aa		4.23	□□□□□ -1.73
CHD4-205	ENST00000536301	ZNF613	Q6PF04	617 aa		4.23	□□□□□ -1.73
CHD4-205	ENST00000536301	TTC33	Q6PID6	262 aa	Predicted RBP	4.23	□□□□□ -1.73
CHD4-205	ENST00000536301	METAP1D	Q6UB28	335 aa	Predicted RBP	4.23	□□□□□ -1.73
CHD4-205	ENST00000536301	C10orf99	Q6UWK7	81 aa		4.23	□□□□□ -1.73
CHD4-205	ENST00000536301	HIST3H2A	Q7L7L0	130 aa		4.23	□□□□□ -1.73
CHD4-205	ENST00000536301	MICU2	Q8IYU8	434 aa		4.23	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms