RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 A0A1W2PNV4 684 aa14.27□□□□□ -0.12
CHMP1A-202ENST00000535997 BCAT2O15382 392 aaPredicted RBP14.27□□□□□ -0.12
CHMP1A-202ENST00000535997 SYT7O43581 403 aa14.27□□□□□ -0.12
CHMP1A-202ENST00000535997 BPNT1O95861 308 aa14.27□□□□□ -0.12
CHMP1A-202ENST00000535997 GNALP38405 381 aa14.27□□□□□ -0.12
CHMP1A-202ENST00000535997 GSK3AP49840 483 aa14.27□□□□□ -0.12
CHMP1A-202ENST00000535997 ZMYND11Q15326 602 aa14.27□□□□□ -0.12
CHMP1A-202ENST00000535997 SCGB2B2Q4G0G5 96 aa14.27□□□□□ -0.12
CHMP1A-202ENST00000535997 SLC25A53Q5H9E4 307 aa14.27□□□□□ -0.12
CHMP1A-202ENST00000535997 LIN54Q6MZP7 749 aa14.27□□□□□ -0.12
CHMP1A-202ENST00000535997 RHOUQ7L0Q8 258 aa14.27□□□□□ -0.12
CHMP1A-202ENST00000535997 BEST3Q8N1M1 668 aa14.27□□□□□ -0.12
CHMP1A-202ENST00000535997 ACBD4Q8NC06 268 aa14.27□□□□□ -0.12
CHMP1A-202ENST00000535997 STEAP2Q8NFT2 490 aa14.27□□□□□ -0.12
CHMP1A-202ENST00000535997 OR1M1Q8NGA1 313 aa14.27□□□□□ -0.12
CHMP1A-202ENST00000535997 OR5L2Q8NGL0 311 aa14.27□□□□□ -0.12
CHMP1A-202ENST00000535997 OR5M8Q8NGP6 311 aa14.27□□□□□ -0.12
CHMP1A-202ENST00000535997 PMEPA1Q969W9 287 aa14.27□□□□□ -0.12
CHMP1A-202ENST00000535997 FAM46BQ96A09 425 aa14.27□□□□□ -0.12
CHMP1A-202ENST00000535997 PBOV1Q9GZY1 135 aa14.27□□□□□ -0.12
CHMP1A-202ENST00000535997 CEP192Q8TEP8 1941 aa14.27□□□□□ -0.12
CHMP1A-202ENST00000535997 EXPH5Q8NEV8 1989 aa14.27□□□□□ -0.13
CHMP1A-202ENST00000535997 A0A0D9SG52 128 aa14.27□□□□□ -0.13
CHMP1A-202ENST00000535997 LOC101059948A0A1B0GTJ6 334 aa14.27□□□□□ -0.13
CHMP1A-202ENST00000535997 OR5H14A6NHG9 310 aa14.27□□□□□ -0.13
CHMP1A-202ENST00000535997 A8MXK9 166 aa14.27□□□□□ -0.13
CHMP1A-202ENST00000535997 KRBOX1C9JBD0 128 aa14.27□□□□□ -0.13
CHMP1A-202ENST00000535997 H3BML4 177 aa14.27□□□□□ -0.13
CHMP1A-202ENST00000535997 EIF1AYO14602 144 aaKnown RBP14.27□□□□□ -0.13
CHMP1A-202ENST00000535997 EFNA2O43921 213 aa14.27□□□□□ -0.13
CHMP1A-202ENST00000535997 LAP3P28838 519 aa14.27□□□□□ -0.13
CHMP1A-202ENST00000535997 CXADRP78310 365 aa14.27□□□□□ -0.13
CHMP1A-202ENST00000535997 QRFPP83859 136 aa14.27□□□□□ -0.13
CHMP1A-202ENST00000535997 SMAD4Q13485 552 aaKnown RBP14.27□□□□□ -0.13
CHMP1A-202ENST00000535997 HYAL4Q2M3T9 481 aa14.27□□□□□ -0.13
CHMP1A-202ENST00000535997 NKAIN1Q4KMZ8 207 aa14.27□□□□□ -0.13
CHMP1A-202ENST00000535997 RNASE10Q5GAN6 216 aaKnown RBP14.27□□□□□ -0.13
CHMP1A-202ENST00000535997 TMEM71Q6P5X7 295 aa14.27□□□□□ -0.13
CHMP1A-202ENST00000535997 PDZD9Q8IXQ8 264 aa14.27□□□□□ -0.13
CHMP1A-202ENST00000535997 SLC38A9Q8NBW4 561 aa14.27□□□□□ -0.13
CHMP1A-202ENST00000535997 GALNT11Q8NCW6 608 aa14.27□□□□□ -0.13
CHMP1A-202ENST00000535997 OR4S1Q8NGB4 309 aa14.27□□□□□ -0.13
CHMP1A-202ENST00000535997 OR52N4Q8NGI2 321 aa14.27□□□□□ -0.13
CHMP1A-202ENST00000535997 NKD1Q969G9 470 aa14.27□□□□□ -0.13
CHMP1A-202ENST00000535997 ZBTB8AQ96BR9 441 aa14.27□□□□□ -0.13
CHMP1A-202ENST00000535997 CXorf58Q96LI9 332 aa14.27□□□□□ -0.13
CHMP1A-202ENST00000535997 EMC6Q9BV81 110 aa14.27□□□□□ -0.13
CHMP1A-202ENST00000535997 PPA2Q9H2U2 334 aa14.27□□□□□ -0.13
CHMP1A-202ENST00000535997 SDHAF3Q9NRP4 125 aa14.27□□□□□ -0.13
CHMP1A-202ENST00000535997 FBLN5Q9UBX5 448 aa14.27□□□□□ -0.13
CHMP1A-202ENST00000535997 GPN3Q9UHW5 284 aaPredicted RBP14.27□□□□□ -0.13
CHMP1A-202ENST00000535997 TRAV14DV4A0A0A6YYC5 116 aa14.26□□□□□ -0.13
CHMP1A-202ENST00000535997 WIPF3A6NGB9 483 aa14.26□□□□□ -0.13
CHMP1A-202ENST00000535997 HLA-GP17693 338 aa14.26□□□□□ -0.13
CHMP1A-202ENST00000535997 ZNF41P51814 821 aaPredicted RBP14.26□□□□□ -0.13
CHMP1A-202ENST00000535997 CDNFQ49AH0 187 aa14.26□□□□□ -0.13
CHMP1A-202ENST00000535997 ZNF529Q6P280 563 aa14.26□□□□□ -0.13
CHMP1A-202ENST00000535997 CD163Q86VB7 1156 aa14.26□□□□□ -0.13
CHMP1A-202ENST00000535997 SLC25A42Q86VD7 318 aa14.26□□□□□ -0.13
CHMP1A-202ENST00000535997 FJX1Q86VR8 437 aa14.26□□□□□ -0.13
CHMP1A-202ENST00000535997 OR1J2Q8NGS2 313 aa14.26□□□□□ -0.13
CHMP1A-202ENST00000535997 ADAT3Q96EY9 351 aaPredicted RBP14.26□□□□□ -0.13
CHMP1A-202ENST00000535997 NUDT16L1Q9BRJ7 211 aaKnown RBP14.26□□□□□ -0.13
CHMP1A-202ENST00000535997 KLRF1Q9NZS2 232 aa14.26□□□□□ -0.13
CHMP1A-202ENST00000535997 B3GAT1Q9P2W7 334 aa14.26□□□□□ -0.13
CHMP1A-202ENST00000535997 SLC5A6Q9Y289 635 aa14.26□□□□□ -0.13
CHMP1A-202ENST00000535997 RALGAPA1Q6GYQ0 2036 aa14.26□□□□□ -0.13
CHMP1A-202ENST00000535997 ERCC1P07992 297 aaPredicted RBP14.26□□□□□ -0.13
CHMP1A-202ENST00000535997 MGMTP16455 207 aa14.26□□□□□ -0.13
CHMP1A-202ENST00000535997 RAB3AP20336 220 aa14.26□□□□□ -0.13
CHMP1A-202ENST00000535997 CD34P28906 385 aa14.26□□□□□ -0.13
CHMP1A-202ENST00000535997 NUP62P37198 522 aaPredicted RBP14.26□□□□□ -0.13
CHMP1A-202ENST00000535997 ACY1Q03154 408 aa14.26□□□□□ -0.13
CHMP1A-202ENST00000535997 MYBPHQ13203 477 aa14.26□□□□□ -0.13
CHMP1A-202ENST00000535997 UNC119Q13432 240 aa14.26□□□□□ -0.13
CHMP1A-202ENST00000535997 TRAPPC6BQ86SZ2 158 aa14.26□□□□□ -0.13
CHMP1A-202ENST00000535997 DTWD2Q8NBA8 298 aa14.26□□□□□ -0.13
CHMP1A-202ENST00000535997 MESP1Q9BRJ9 268 aa14.26□□□□□ -0.13
CHMP1A-202ENST00000535997 PPP4R1LQ9P1A2 415 aa14.26□□□□□ -0.13
CHMP1A-202ENST00000535997 ASCC3Q8N3C0 2202 aaKnown RBP14.26□□□□□ -0.13
CHMP1A-202ENST00000535997 IGLV3-32A0A0A0MS00 114 aa14.25□□□□□ -0.13
CHMP1A-202ENST00000535997 TRBV11-1A0A0K0K1C0 115 aa14.25□□□□□ -0.13
CHMP1A-202ENST00000535997 HLA-AP01891 365 aaKnown RBP14.25□□□□□ -0.13
CHMP1A-202ENST00000535997 VSIG8P0DPA2 414 aa14.25□□□□□ -0.13
CHMP1A-202ENST00000535997 CLDN6P56747 220 aa14.25□□□□□ -0.13
CHMP1A-202ENST00000535997 TAGLNQ01995 201 aaKnown RBP14.25□□□□□ -0.13
CHMP1A-202ENST00000535997 TUSC1Q2TAM9 212 aa14.25□□□□□ -0.13
CHMP1A-202ENST00000535997 FAHD2BQ6P2I3 314 aaPredicted RBP14.25□□□□□ -0.13
CHMP1A-202ENST00000535997 EIF4E3Q8N5X7 224 aaKnown RBP14.25□□□□□ -0.13
CHMP1A-202ENST00000535997 ZDHHC22Q8N966 263 aa14.25□□□□□ -0.13
CHMP1A-202ENST00000535997 SPERTQ8NA61 448 aa14.25□□□□□ -0.13
CHMP1A-202ENST00000535997 CHST4Q8NCG5 386 aa14.25□□□□□ -0.13
CHMP1A-202ENST00000535997 OR10S1Q8NGN2 331 aa14.25□□□□□ -0.13
CHMP1A-202ENST00000535997 FAHD2AQ96GK7 314 aa14.25□□□□□ -0.13
CHMP1A-202ENST00000535997 PTGES2Q9H7Z7 377 aa14.25□□□□□ -0.13
CHMP1A-202ENST00000535997 FBXL2Q9UKC9 423 aa14.25□□□□□ -0.13
CHMP1A-202ENST00000535997 PLEKHA6Q9Y2H5 1048 aa14.25□□□□□ -0.13
CHMP1A-202ENST00000535997 POM121CA8CG34 1229 aa14.25□□□□□ -0.13
CHMP1A-202ENST00000535997 HOXD4P09016 255 aaPredicted RBP14.25□□□□□ -0.13
CHMP1A-202ENST00000535997 FGF2P09038 288 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms