RNA–Protein interactions for RNA: ENST00000535934.2

POLE-208, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 5

Gene POLE, Length 1,561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-208	ENST00000535934	CLVS2	Q5SYC1	327 aa		12.34	□□□□□ -0.43
POLE-208	ENST00000535934	GCNT6	Q5T4J0	391 aa		12.34	□□□□□ -0.43
POLE-208	ENST00000535934	REEP3	Q6NUK4	255 aa		12.34	□□□□□ -0.43
POLE-208	ENST00000535934	ZNF730	Q6ZMV8	503 aa		12.34	□□□□□ -0.43
POLE-208	ENST00000535934	AAED1	Q7RTV5	226 aa		12.34	□□□□□ -0.43
POLE-208	ENST00000535934	NANOGP1	Q8N7R0	232 aa		12.34	□□□□□ -0.43
POLE-208	ENST00000535934	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	12.34	□□□□□ -0.43
POLE-208	ENST00000535934	TMEM45B	Q96B21	275 aa		12.34	□□□□□ -0.43
POLE-208	ENST00000535934	SGTB	Q96EQ0	304 aa		12.34	□□□□□ -0.43
POLE-208	ENST00000535934	SF3B5	Q9BWJ5	86 aa	Known RBP	12.34	□□□□□ -0.43
POLE-208	ENST00000535934	PPP1R3E	Q9H7J1	279 aa		12.34	□□□□□ -0.43
POLE-208	ENST00000535934	SLC25A19	Q9HC21	320 aa		12.34	□□□□□ -0.43
POLE-208	ENST00000535934	IGKV1D-42	A0A075B6H8	117 aa		12.33	□□□□□ -0.44
POLE-208	ENST00000535934	ARPC4-TTLL3	A0A0A6YYG9	625 aa		12.33	□□□□□ -0.44
POLE-208	ENST00000535934		A0A1B0GW55	424 aa		12.33	□□□□□ -0.44
POLE-208	ENST00000535934	C5orf58	C9J3I9	102 aa		12.33	□□□□□ -0.44
POLE-208	ENST00000535934		E7EQL1	145 aa		12.33	□□□□□ -0.44
POLE-208	ENST00000535934	FABP7	O15540	132 aa		12.33	□□□□□ -0.44
POLE-208	ENST00000535934	DUX4L2	P0CJ85	424 aa		12.33	□□□□□ -0.44
POLE-208	ENST00000535934	DUX4L3	P0CJ86	424 aa		12.33	□□□□□ -0.44
POLE-208	ENST00000535934	DUX4L4	P0CJ87	422 aa		12.33	□□□□□ -0.44
POLE-208	ENST00000535934	DUX4L5	P0CJ88	424 aa		12.33	□□□□□ -0.44
POLE-208	ENST00000535934	DUX4L6	P0CJ89	424 aa		12.33	□□□□□ -0.44
POLE-208	ENST00000535934	DUX4L7	P0CJ90	424 aa		12.33	□□□□□ -0.44
POLE-208	ENST00000535934	CD40	P25942	277 aa		12.33	□□□□□ -0.44
POLE-208	ENST00000535934	AQP1	P29972	269 aa		12.33	□□□□□ -0.44
POLE-208	ENST00000535934	PRKAR1B	P31321	381 aa		12.33	□□□□□ -0.44
POLE-208	ENST00000535934	SELENOP	P49908	381 aa		12.33	□□□□□ -0.44
POLE-208	ENST00000535934	HMGA2	P52926	109 aa		12.33	□□□□□ -0.44
POLE-208	ENST00000535934	NUDT6	P53370	316 aa		12.33	□□□□□ -0.44
POLE-208	ENST00000535934	RBBP4	Q09028	425 aa		12.33	□□□□□ -0.44
POLE-208	ENST00000535934	HNRNPA0	Q13151	305 aa	Known RBP	12.33	□□□□□ -0.44
POLE-208	ENST00000535934	KRTAP21-3	Q3LHN1	58 aa		12.33	□□□□□ -0.44
POLE-208	ENST00000535934	IFI44L	Q53G44	452 aa		12.33	□□□□□ -0.44
POLE-208	ENST00000535934	TMEM225	Q6GV28	225 aa		12.33	□□□□□ -0.44
POLE-208	ENST00000535934	B3GLCT	Q6Y288	498 aa		12.33	□□□□□ -0.44
POLE-208	ENST00000535934	LINGO2	Q7L985	606 aa		12.33	□□□□□ -0.44
POLE-208	ENST00000535934	OVCH2	Q7RTZ1	564 aa		12.33	□□□□□ -0.44
POLE-208	ENST00000535934	SLC30A8	Q8IWU4	369 aa		12.33	□□□□□ -0.44
POLE-208	ENST00000535934	OR4C15	Q8NGM1	316 aa		12.33	□□□□□ -0.44
POLE-208	ENST00000535934	STK35	Q8TDR2	534 aa		12.33	□□□□□ -0.44
POLE-208	ENST00000535934	ERMAP	Q96PL5	475 aa	Predicted RBP	12.33	□□□□□ -0.44
POLE-208	ENST00000535934	POLR2J2	Q9GZM3	115 aa	Known RBP	12.33	□□□□□ -0.44
POLE-208	ENST00000535934	SCPEP1	Q9HB40	452 aa		12.33	□□□□□ -0.44
POLE-208	ENST00000535934	UPB1	Q9UBR1	384 aa		12.33	□□□□□ -0.44
POLE-208	ENST00000535934	DUX4	Q9UBX2	424 aa		12.33	□□□□□ -0.44
POLE-208	ENST00000535934		A0A1B0GWA3	101 aa		12.32	□□□□□ -0.44
POLE-208	ENST00000535934	RPS10-NUDT3	A0A1W2PQS6	291 aa		12.32	□□□□□ -0.44
POLE-208	ENST00000535934	TSC22D2	O75157	780 aa		12.32	□□□□□ -0.44
POLE-208	ENST00000535934	LALBA	P00709	142 aa		12.32	□□□□□ -0.44
POLE-208	ENST00000535934	IGHV4-39	P01824	125 aa		12.32	□□□□□ -0.44
POLE-208	ENST00000535934	HEXA	P06865	529 aa		12.32	□□□□□ -0.44
POLE-208	ENST00000535934	FGF9	P31371	208 aa	Predicted RBP	12.32	□□□□□ -0.44
POLE-208	ENST00000535934	NUP62	P37198	522 aa	Predicted RBP	12.32	□□□□□ -0.44
POLE-208	ENST00000535934	CDH11	P55287	796 aa		12.32	□□□□□ -0.44
POLE-208	ENST00000535934	SELENOW	P63302	87 aa		12.32	□□□□□ -0.44
POLE-208	ENST00000535934	OR7E24	Q6IFN5	339 aa		12.32	□□□□□ -0.44
POLE-208	ENST00000535934	DTX2	Q86UW9	622 aa		12.32	□□□□□ -0.44
POLE-208	ENST00000535934	PTOV1	Q86YD1	416 aa		12.32	□□□□□ -0.44
POLE-208	ENST00000535934	PIAS4	Q8N2W9	510 aa	Predicted RBP	12.32	□□□□□ -0.44
POLE-208	ENST00000535934	C11orf65	Q8NCR3	313 aa		12.32	□□□□□ -0.44
POLE-208	ENST00000535934	MAPK1IP1L	Q8NDC0	245 aa		12.32	□□□□□ -0.44
POLE-208	ENST00000535934	MFSD8	Q8NHS3	518 aa		12.32	□□□□□ -0.44
POLE-208	ENST00000535934	TAAR8	Q969N4	342 aa		12.32	□□□□□ -0.44
POLE-208	ENST00000535934	PHF21A	Q96BD5	680 aa		12.32	□□□□□ -0.44
POLE-208	ENST00000535934	SLC25A36	Q96CQ1	311 aa		12.32	□□□□□ -0.44
POLE-208	ENST00000535934	SLCO5A1	Q9H2Y9	848 aa		12.32	□□□□□ -0.44
POLE-208	ENST00000535934	TMEM38A	Q9H6F2	299 aa		12.32	□□□□□ -0.44
POLE-208	ENST00000535934	AMBN	Q9NP70	447 aa		12.32	□□□□□ -0.44
POLE-208	ENST00000535934	IFT46	Q9NQC8	304 aa		12.32	□□□□□ -0.44
POLE-208	ENST00000535934	SLC17A5	Q9NRA2	495 aa		12.32	□□□□□ -0.44
POLE-208	ENST00000535934	TXNL4B	Q9NX01	149 aa	Known RBP	12.32	□□□□□ -0.44
POLE-208	ENST00000535934	GDF2	Q9UK05	429 aa	Predicted RBP	12.32	□□□□□ -0.44
POLE-208	ENST00000535934	DIMT1	Q9UNQ2	313 aa	Known RBP	12.32	□□□□□ -0.44
POLE-208	ENST00000535934	BAIAP2	Q9UQB8	552 aa		12.32	□□□□□ -0.44
POLE-208	ENST00000535934	COL6A5	A8TX70	2615 aa		12.31	□□□□□ -0.44
POLE-208	ENST00000535934	hCG_1807616	A0A1W2PRN6	198 aa		12.31	□□□□□ -0.44
POLE-208	ENST00000535934		M0R1B8	84 aa		12.31	□□□□□ -0.44
POLE-208	ENST00000535934	CHP2	O43745	196 aa		12.31	□□□□□ -0.44
POLE-208	ENST00000535934	PNMT	P11086	282 aa		12.31	□□□□□ -0.44
POLE-208	ENST00000535934	GAL	P22466	123 aa		12.31	□□□□□ -0.44
POLE-208	ENST00000535934	MPG	P29372	298 aa		12.31	□□□□□ -0.44
POLE-208	ENST00000535934	EVX1	P49640	407 aa		12.31	□□□□□ -0.44
POLE-208	ENST00000535934	BLVRA	P53004	296 aa		12.31	□□□□□ -0.44
POLE-208	ENST00000535934	CRISP1	P54107	249 aa		12.31	□□□□□ -0.44
POLE-208	ENST00000535934	SCARB2	Q14108	478 aa		12.31	□□□□□ -0.44
POLE-208	ENST00000535934	OCLN	Q16625	522 aa		12.31	□□□□□ -0.44
POLE-208	ENST00000535934	HIKESHI	Q53FT3	197 aa		12.31	□□□□□ -0.44
POLE-208	ENST00000535934	TMEM108	Q6UXF1	575 aa		12.31	□□□□□ -0.44
POLE-208	ENST00000535934	VTCN1	Q7Z7D3	282 aa		12.31	□□□□□ -0.44
POLE-208	ENST00000535934	PHC2	Q8IXK0	858 aa		12.31	□□□□□ -0.44
POLE-208	ENST00000535934	C7orf50	Q9BRJ6	194 aa	Known RBP	12.31	□□□□□ -0.44
POLE-208	ENST00000535934	SHARPIN	Q9H0F6	387 aa		12.31	□□□□□ -0.44
POLE-208	ENST00000535934	CACYBP	Q9HB71	228 aa	Known RBP	12.31	□□□□□ -0.44
POLE-208	ENST00000535934	RDH8	Q9NYR8	311 aa		12.31	□□□□□ -0.44
POLE-208	ENST00000535934	B3GAT1	Q9P2W7	334 aa		12.31	□□□□□ -0.44
POLE-208	ENST00000535934	NLK	Q9UBE8	527 aa		12.31	□□□□□ -0.44
POLE-208	ENST00000535934	SCP2D1	Q9UJQ7	156 aa		12.31	□□□□□ -0.44
POLE-208	ENST00000535934	PRELID3B	Q9Y3B1	194 aa		12.31	□□□□□ -0.44
POLE-208	ENST00000535934	NUBP2	Q9Y5Y2	271 aa		12.31	□□□□□ -0.44

Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms