RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 NAA40Q86UY6 237 aa10.37□□□□□ -0.75
CHD4-203ENST00000535717 LRP11Q86VZ4 500 aa10.37□□□□□ -0.75
CHD4-203ENST00000535717 OR51G2Q8NGK0 314 aa10.37□□□□□ -0.75
CHD4-203ENST00000535717 OR1J1Q8NGS3 322 aa10.37□□□□□ -0.75
CHD4-203ENST00000535717 APH1BQ8WW43 257 aa10.37□□□□□ -0.75
CHD4-203ENST00000535717 NINJ1Q92982 152 aa10.37□□□□□ -0.75
CHD4-203ENST00000535717 PIGTQ969N2 578 aa10.37□□□□□ -0.75
CHD4-203ENST00000535717 MRPL24Q96A35 216 aaKnown RBP10.37□□□□□ -0.75
CHD4-203ENST00000535717 COPS4Q9BT78 406 aa10.37□□□□□ -0.75
CHD4-203ENST00000535717 MRPL37Q9BZE1 423 aaKnown RBP10.37□□□□□ -0.75
CHD4-203ENST00000535717 POFUT1Q9H488 388 aa10.37□□□□□ -0.75
CHD4-203ENST00000535717 ELOVL3Q9HB03 270 aa10.37□□□□□ -0.75
CHD4-203ENST00000535717 TBCCD1Q9NVR7 557 aa10.37□□□□□ -0.75
CHD4-203ENST00000535717 CLN6Q9NWW5 311 aa10.37□□□□□ -0.75
CHD4-203ENST00000535717 SCOCQ9UIL1 159 aa10.37□□□□□ -0.75
CHD4-203ENST00000535717 LAMP5Q9UJQ1 280 aa10.37□□□□□ -0.75
CHD4-203ENST00000535717 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.37□□□□□ -0.75
CHD4-203ENST00000535717 COPS3Q9UNS2 423 aa10.37□□□□□ -0.75
CHD4-203ENST00000535717 STARD10Q9Y365 291 aa10.37□□□□□ -0.75
CHD4-203ENST00000535717 MYO9AB2RTY4 2548 aa10.37□□□□□ -0.75
CHD4-203ENST00000535717 USF3Q68DE3 2245 aa10.37□□□□□ -0.75
CHD4-203ENST00000535717 MAGEA13PA6NCF6 341 aa10.36□□□□□ -0.75
CHD4-203ENST00000535717 VSTM5A8MXK1 200 aa10.36□□□□□ -0.75
CHD4-203ENST00000535717 PRR32B1ATL7 298 aa10.36□□□□□ -0.75
CHD4-203ENST00000535717 B9A039 149 aa10.36□□□□□ -0.75
CHD4-203ENST00000535717 H0YAE9 185 aa10.36□□□□□ -0.75
CHD4-203ENST00000535717 H0YJX3 145 aa10.36□□□□□ -0.75
CHD4-203ENST00000535717 M0R135 149 aa10.36□□□□□ -0.75
CHD4-203ENST00000535717 OVOL3O00110 214 aa10.36□□□□□ -0.75
CHD4-203ENST00000535717 WBP4O75554 376 aaKnown RBP10.36□□□□□ -0.75
CHD4-203ENST00000535717 APOL3O95236 402 aa10.36□□□□□ -0.75
CHD4-203ENST00000535717 ZNF250P15622 560 aa10.36□□□□□ -0.75
CHD4-203ENST00000535717 OPRL1P41146 370 aa10.36□□□□□ -0.75
CHD4-203ENST00000535717 MTNR1AP48039 350 aa10.36□□□□□ -0.75
CHD4-203ENST00000535717 TPTEP56180 551 aa10.36□□□□□ -0.75
CHD4-203ENST00000535717 IL5RAQ01344 420 aa10.36□□□□□ -0.75
CHD4-203ENST00000535717 POU4F2Q12837 409 aa10.36□□□□□ -0.75
CHD4-203ENST00000535717 MAD2L1BPQ15013 274 aaPredicted RBP10.36□□□□□ -0.75
CHD4-203ENST00000535717 TAF13Q15543 124 aa10.36□□□□□ -0.75
CHD4-203ENST00000535717 UNQ6126/PRO20091Q6UXV3 157 aa10.36□□□□□ -0.75
CHD4-203ENST00000535717 COLCA1Q6ZS62 124 aa10.36□□□□□ -0.75
CHD4-203ENST00000535717 RHOUQ7L0Q8 258 aa10.36□□□□□ -0.75
CHD4-203ENST00000535717 SLC35F2Q8IXU6 374 aa10.36□□□□□ -0.75
CHD4-203ENST00000535717 RFLNBQ8N5W9 214 aa10.36□□□□□ -0.75
CHD4-203ENST00000535717 SLC25A40Q8TBP6 338 aa10.36□□□□□ -0.75
CHD4-203ENST00000535717 IPCEF1Q8WWN9 437 aaPredicted RBP10.36□□□□□ -0.75
CHD4-203ENST00000535717 TFAP2CQ92754 450 aa10.36□□□□□ -0.75
CHD4-203ENST00000535717 SPTSSAQ969W0 71 aa10.36□□□□□ -0.75
CHD4-203ENST00000535717 MBD6Q96DN6 1003 aa10.36□□□□□ -0.75
CHD4-203ENST00000535717 ZNF799Q96GE5 643 aa10.36□□□□□ -0.75
CHD4-203ENST00000535717 MARS2Q96GW9 593 aaKnown RBP10.36□□□□□ -0.75
CHD4-203ENST00000535717 Q96MT0 163 aa10.36□□□□□ -0.75
CHD4-203ENST00000535717 KCNJ15Q99712 375 aa10.36□□□□□ -0.75
CHD4-203ENST00000535717 SYT3Q9BQG1 590 aa10.36□□□□□ -0.75
CHD4-203ENST00000535717 C1QTNF5Q9BXJ0 243 aa10.36□□□□□ -0.75
CHD4-203ENST00000535717 OR2J1Q9GZK6 312 aa10.36□□□□□ -0.75
CHD4-203ENST00000535717 PLK3Q9H4B4 646 aa10.36□□□□□ -0.75
CHD4-203ENST00000535717 MYEF2Q9P2K5 600 aaKnown RBP10.36□□□□□ -0.75
CHD4-203ENST00000535717 CLPTM1O96005 669 aa10.35□□□□□ -0.75
CHD4-203ENST00000535717 H2BFMP0C1H6 154 aa10.35□□□□□ -0.75
CHD4-203ENST00000535717 ANOS1P23352 680 aa10.35□□□□□ -0.75
CHD4-203ENST00000535717 CDKN1AP38936 164 aa10.35□□□□□ -0.75
CHD4-203ENST00000535717 MPV17P39210 176 aa10.35□□□□□ -0.75
CHD4-203ENST00000535717 SLC15A1P46059 708 aa10.35□□□□□ -0.75
CHD4-203ENST00000535717 EVX1P49640 407 aa10.35□□□□□ -0.75
CHD4-203ENST00000535717 RGS6P49758 472 aa10.35□□□□□ -0.75
CHD4-203ENST00000535717 PRKXP51817 358 aa10.35□□□□□ -0.75
CHD4-203ENST00000535717 ISL1P61371 349 aa10.35□□□□□ -0.75
CHD4-203ENST00000535717 GRB2P62993 217 aaKnown RBP10.35□□□□□ -0.75
CHD4-203ENST00000535717 ZNF91Q05481 1191 aa10.35□□□□□ -0.75
CHD4-203ENST00000535717 IL18R1Q13478 541 aa10.35□□□□□ -0.75
CHD4-203ENST00000535717 SMN1Q16637 294 aaKnown RBP10.35□□□□□ -0.75
CHD4-203ENST00000535717 DEFB113Q30KQ7 82 aa10.35□□□□□ -0.75
CHD4-203ENST00000535717 TMEM255AQ5JRV8 349 aa10.35□□□□□ -0.75
CHD4-203ENST00000535717 C6orf52Q5T4I8 152 aa10.35□□□□□ -0.75
CHD4-203ENST00000535717 DRAM2Q6UX65 266 aa10.35□□□□□ -0.75
CHD4-203ENST00000535717 LRRN1Q6UXK5 716 aa10.35□□□□□ -0.75
CHD4-203ENST00000535717 USP51Q70EK9 711 aa10.35□□□□□ -0.75
CHD4-203ENST00000535717 C1orf174Q8IYL3 243 aa10.35□□□□□ -0.75
CHD4-203ENST00000535717 SETD9Q8NE22 299 aa10.35□□□□□ -0.75
CHD4-203ENST00000535717 SYNPRQ8TBG9 265 aa10.35□□□□□ -0.75
CHD4-203ENST00000535717 KLF14Q8TD94 323 aaPredicted RBP10.35□□□□□ -0.75
CHD4-203ENST00000535717 APOBEC3DQ96AK3 386 aaPredicted RBP10.35□□□□□ -0.75
CHD4-203ENST00000535717 RNFT2Q96EX2 444 aa10.35□□□□□ -0.75
CHD4-203ENST00000535717 MNTQ99583 582 aa10.35□□□□□ -0.75
CHD4-203ENST00000535717 DOK1Q99704 481 aa10.35□□□□□ -0.75
CHD4-203ENST00000535717 TTTY10Q9BZA0 68 aa10.35□□□□□ -0.75
CHD4-203ENST00000535717 AMBNQ9NP70 447 aa10.35□□□□□ -0.75
CHD4-203ENST00000535717 ZNF701Q9NV72 531 aaPredicted RBP10.35□□□□□ -0.75
CHD4-203ENST00000535717 BEX4Q9NWD9 120 aaPredicted RBP10.35□□□□□ -0.75
CHD4-203ENST00000535717 SLCO1C1Q9NYB5 712 aa10.35□□□□□ -0.75
CHD4-203ENST00000535717 DUSP13Q9UII6 198 aa10.35□□□□□ -0.75
CHD4-203ENST00000535717 TMEM14AQ9Y6G1 99 aa10.35□□□□□ -0.75
CHD4-203ENST00000535717 ARFGEF3Q5TH69 2177 aa10.35□□□□□ -0.75
CHD4-203ENST00000535717 ARID1AO14497 2285 aa10.34□□□□□ -0.75
CHD4-203ENST00000535717 IGLV3-9A0A075B6K5 115 aa10.34□□□□□ -0.75
CHD4-203ENST00000535717 C5orf63A6NC05 138 aa10.34□□□□□ -0.75
CHD4-203ENST00000535717 SNTNA6NMZ2 147 aa10.34□□□□□ -0.75
CHD4-203ENST00000535717 ZNF670-ZNF695F2Z2N8 137 aa10.34□□□□□ -0.75
CHD4-203ENST00000535717 J3QRE1 110 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms