RNA–Protein interactions for RNA: ENST00000535202.1

SFSWAP-202, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-202ENST00000535202 GLYATQ6IB77 296 aa7.39□□□□□ -1.23
SFSWAP-202ENST00000535202 NHLRC1Q6VVB1 395 aa7.39□□□□□ -1.23
SFSWAP-202ENST00000535202 DEF8Q6ZN54 512 aa7.39□□□□□ -1.23
SFSWAP-202ENST00000535202 SLC35D2Q76EJ3 337 aa7.39□□□□□ -1.23
SFSWAP-202ENST00000535202 HIST3H2AQ7L7L0 130 aa7.39□□□□□ -1.23
SFSWAP-202ENST00000535202 CDH26Q8IXH8 852 aa7.39□□□□□ -1.23
SFSWAP-202ENST00000535202 LRRC17Q8N6Y2 441 aa7.39□□□□□ -1.23
SFSWAP-202ENST00000535202 OR4M2Q8NGB6 313 aa7.39□□□□□ -1.23
SFSWAP-202ENST00000535202 OR4M1Q8NGD0 313 aa7.39□□□□□ -1.23
SFSWAP-202ENST00000535202 OR8J3Q8NGG0 315 aa7.39□□□□□ -1.23
SFSWAP-202ENST00000535202 FANK1Q8TC84 345 aa7.39□□□□□ -1.23
SFSWAP-202ENST00000535202 HIST1H2ACQ93077 130 aa7.39□□□□□ -1.23
SFSWAP-202ENST00000535202 DMRTB1Q96MA1 342 aa7.39□□□□□ -1.23
SFSWAP-202ENST00000535202 FOXB1Q99853 325 aa7.39□□□□□ -1.23
SFSWAP-202ENST00000535202 PIMREGQ9BSJ6 248 aa7.39□□□□□ -1.23
SFSWAP-202ENST00000535202 C6orf62Q9GZU0 229 aaPredicted RBP7.39□□□□□ -1.23
SFSWAP-202ENST00000535202 PLK3Q9H4B4 646 aa7.39□□□□□ -1.23
SFSWAP-202ENST00000535202 ZNF442Q9H7R0 627 aa7.39□□□□□ -1.23
SFSWAP-202ENST00000535202 RANGRFQ9HD47 186 aaPredicted RBP7.39□□□□□ -1.23
SFSWAP-202ENST00000535202 IL1RAPQ9NPH3 570 aa7.39□□□□□ -1.23
SFSWAP-202ENST00000535202 DCAF16Q9NXF7 216 aa7.39□□□□□ -1.23
SFSWAP-202ENST00000535202 GMPR2Q9P2T1 348 aaKnown RBP7.39□□□□□ -1.23
SFSWAP-202ENST00000535202 ERVK-18Q9QC07 812 aa7.39□□□□□ -1.23
SFSWAP-202ENST00000535202 BOLA1Q9Y3E2 137 aa7.39□□□□□ -1.23
SFSWAP-202ENST00000535202 NIPBLQ6KC79 2804 aaeCLIP7.39□□□□□ -1.232e-6■□□□□ 11.3
SFSWAP-202ENST00000535202 TLN2Q9Y4G6 2542 aa7.38□□□□□ -1.23
SFSWAP-202ENST00000535202 ZNF98A6NK75 572 aa7.38□□□□□ -1.23
SFSWAP-202ENST00000535202 KRBOX1C9JBD0 128 aa7.38□□□□□ -1.23
SFSWAP-202ENST00000535202 E9PQ18 207 aa7.38□□□□□ -1.23
SFSWAP-202ENST00000535202 UBL3O95164 117 aa7.38□□□□□ -1.23
SFSWAP-202ENST00000535202 RAB36O95755 333 aa7.38□□□□□ -1.23
SFSWAP-202ENST00000535202 MT-ND2P03891 347 aa7.38□□□□□ -1.23
SFSWAP-202ENST00000535202 RRASP10301 218 aa7.38□□□□□ -1.23
SFSWAP-202ENST00000535202 ZNF16P17020 682 aaPredicted RBP7.38□□□□□ -1.23
SFSWAP-202ENST00000535202 GIPRP48546 466 aa7.38□□□□□ -1.23
SFSWAP-202ENST00000535202 POLR2GP62487 172 aaKnown RBP eCLIP7.38□□□□□ -1.23
SFSWAP-202ENST00000535202 VLDLRP98155 873 aa7.38□□□□□ -1.23
SFSWAP-202ENST00000535202 ZP4Q12836 540 aa7.38□□□□□ -1.23
SFSWAP-202ENST00000535202 AANATQ16613 207 aa7.38□□□□□ -1.23
SFSWAP-202ENST00000535202 SLC35F1Q5T1Q4 408 aa7.38□□□□□ -1.23
SFSWAP-202ENST00000535202 GPR139Q6DWJ6 353 aa7.38□□□□□ -1.23
SFSWAP-202ENST00000535202 ERICH5Q6P6B1 374 aa7.38□□□□□ -1.23
SFSWAP-202ENST00000535202 SHQ1Q6PI26 577 aaKnown RBP7.38□□□□□ -1.23
SFSWAP-202ENST00000535202 ZNF600Q6ZNG1 722 aa7.38□□□□□ -1.23
SFSWAP-202ENST00000535202 CALHM3Q86XJ0 350 aa7.38□□□□□ -1.23
SFSWAP-202ENST00000535202 YIPF7Q8N8F6 280 aa7.38□□□□□ -1.23
SFSWAP-202ENST00000535202 OR6X1Q8NH79 312 aa7.38□□□□□ -1.23
SFSWAP-202ENST00000535202 PFN4Q8NHR9 129 aa7.38□□□□□ -1.23
SFSWAP-202ENST00000535202 MYDGFQ969H8 173 aa7.38□□□□□ -1.23
SFSWAP-202ENST00000535202 TMEM54Q969K7 222 aa7.38□□□□□ -1.23
SFSWAP-202ENST00000535202 MS4A3Q96HJ5 214 aa7.38□□□□□ -1.23
SFSWAP-202ENST00000535202 PITX2Q99697 317 aa7.38□□□□□ -1.23
SFSWAP-202ENST00000535202 MDFIQ99750 246 aa7.38□□□□□ -1.23
SFSWAP-202ENST00000535202 PRSS27Q9BQR3 290 aa7.38□□□□□ -1.23
SFSWAP-202ENST00000535202 ZNF426Q9BUY5 554 aa7.38□□□□□ -1.23
SFSWAP-202ENST00000535202 SLC19A3Q9BZV2 496 aa7.38□□□□□ -1.23
SFSWAP-202ENST00000535202 CCDC90BQ9GZT6 254 aa7.38□□□□□ -1.23
SFSWAP-202ENST00000535202 RAB1BQ9H0U4 201 aa7.38□□□□□ -1.23
SFSWAP-202ENST00000535202 RANBP3Q9H6Z4 567 aaPredicted RBP7.38□□□□□ -1.23
SFSWAP-202ENST00000535202 DYNLRB1Q9NP97 96 aa7.38□□□□□ -1.23
SFSWAP-202ENST00000535202 MYOZ1Q9NP98 299 aaPredicted RBP7.38□□□□□ -1.23
SFSWAP-202ENST00000535202 MEPEQ9NQ76 525 aaPredicted RBP7.38□□□□□ -1.23
SFSWAP-202ENST00000535202 IFT46Q9NQC8 304 aa7.38□□□□□ -1.23
SFSWAP-202ENST00000535202 TAS2R5Q9NYW4 299 aa7.38□□□□□ -1.23
SFSWAP-202ENST00000535202 KIF25Q9UIL4 384 aa7.38□□□□□ -1.23
SFSWAP-202ENST00000535202 CACNG2Q9Y698 323 aa7.38□□□□□ -1.23
SFSWAP-202ENST00000535202 ABCA2Q9BZC7 2435 aa7.38□□□□□ -1.23
SFSWAP-202ENST00000535202 FAM220BPB1ANY3 271 aa7.37□□□□□ -1.23
SFSWAP-202ENST00000535202 VWC2LB2RUY7 222 aa7.37□□□□□ -1.23
SFSWAP-202ENST00000535202 MCIDASD6RGH6 385 aa7.37□□□□□ -1.23
SFSWAP-202ENST00000535202 PTGES3LE9PB15 166 aa7.37□□□□□ -1.23
SFSWAP-202ENST00000535202 BLOC1S5-TXNDC5H3BN57 136 aa7.37□□□□□ -1.23
SFSWAP-202ENST00000535202 I3L521 148 aa7.37□□□□□ -1.23
SFSWAP-202ENST00000535202 NDUFS8O00217 210 aa7.37□□□□□ -1.23
SFSWAP-202ENST00000535202 GATCO43716 136 aaKnown RBP7.37□□□□□ -1.23
SFSWAP-202ENST00000535202 IGHG1P01857 330 aa7.37□□□□□ -1.23
SFSWAP-202ENST00000535202 HLA-DQB1P01920 261 aa7.37□□□□□ -1.23
SFSWAP-202ENST00000535202 APOC1P02654 83 aa7.37□□□□□ -1.23
SFSWAP-202ENST00000535202 MT-ND1P03886 318 aa7.37□□□□□ -1.23
SFSWAP-202ENST00000535202 ERCC1P07992 297 aaPredicted RBP7.37□□□□□ -1.23
SFSWAP-202ENST00000535202 ASAH2BP0C7U1 165 aa7.37□□□□□ -1.23
SFSWAP-202ENST00000535202 PATE4P0C8F1 98 aa7.37□□□□□ -1.23
SFSWAP-202ENST00000535202 IGHV4-31P0DP07 118 aa7.37□□□□□ -1.23
SFSWAP-202ENST00000535202 ZNF14P17017 642 aaPredicted RBP7.37□□□□□ -1.23
SFSWAP-202ENST00000535202 C4BPBP20851 252 aa7.37□□□□□ -1.23
SFSWAP-202ENST00000535202 OR1E2P47887 323 aa7.37□□□□□ -1.23
SFSWAP-202ENST00000535202 CLRN1P58418 232 aa7.37□□□□□ -1.23
SFSWAP-202ENST00000535202 SSTP61278 116 aa7.37□□□□□ -1.23
SFSWAP-202ENST00000535202 BTG1P62324 171 aa7.37□□□□□ -1.23
SFSWAP-202ENST00000535202 RAB1AP62820 205 aa7.37□□□□□ -1.23
SFSWAP-202ENST00000535202 LSM11P83369 360 aaKnown RBP eCLIP7.37□□□□□ -1.23
SFSWAP-202ENST00000535202 PIN1Q13526 163 aaPredicted RBP7.37□□□□□ -1.23
SFSWAP-202ENST00000535202 ZNF273Q14593 569 aa7.37□□□□□ -1.23
SFSWAP-202ENST00000535202 ZIK1Q3SY52 487 aaPredicted RBP7.37□□□□□ -1.23
SFSWAP-202ENST00000535202 CHRFAM7AQ494W8 412 aa7.37□□□□□ -1.23
SFSWAP-202ENST00000535202 IQCCQ4KMZ1 466 aa7.37□□□□□ -1.23
SFSWAP-202ENST00000535202 HSD17B12Q53GQ0 312 aa7.37□□□□□ -1.23
SFSWAP-202ENST00000535202 CYB5R2Q6BCY4 276 aa7.37□□□□□ -1.23
SFSWAP-202ENST00000535202 LAMTOR1Q6IAA8 161 aa7.37□□□□□ -1.23
SFSWAP-202ENST00000535202 MZT2BQ6NZ67 158 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms