RNA–Protein interactions for RNA: ENST00000534307.1

SF3B2-215, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-215ENST00000534307 LINC00346Q8IVM7 164 aa11.87□□□□□ -0.51
SF3B2-215ENST00000534307 ZNF283Q8N7M2 679 aa11.87□□□□□ -0.51
SF3B2-215ENST00000534307 CYB561A3Q8NBI2 242 aa11.87□□□□□ -0.51
SF3B2-215ENST00000534307 OR2Z1Q8NG97 314 aa11.87□□□□□ -0.51
SF3B2-215ENST00000534307 OR10S1Q8NGN2 331 aa11.87□□□□□ -0.51
SF3B2-215ENST00000534307 POP5Q969H6 163 aaKnown RBP11.87□□□□□ -0.51
SF3B2-215ENST00000534307 RAB39BQ96DA2 213 aa11.87□□□□□ -0.51
SF3B2-215ENST00000534307 MAP6Q96JE9 813 aa11.87□□□□□ -0.51
SF3B2-215ENST00000534307 CLPTM1LQ96KA5 538 aa11.87□□□□□ -0.51
SF3B2-215ENST00000534307 SIGLEC11Q96RL6 698 aa11.87□□□□□ -0.51
SF3B2-215ENST00000534307 RBM4Q9BWF3 364 aaKnown RBP11.87□□□□□ -0.51
SF3B2-215ENST00000534307 IL19Q9UHD0 177 aa11.87□□□□□ -0.51
SF3B2-215ENST00000534307 KCNG2Q9UJ96 466 aa11.87□□□□□ -0.51
SF3B2-215ENST00000534307 PLPP2O43688 288 aa11.86□□□□□ -0.51
SF3B2-215ENST00000534307 IGHV2-70P01814 119 aa11.86□□□□□ -0.51
SF3B2-215ENST00000534307 ANPEPP15144 967 aa11.86□□□□□ -0.51
SF3B2-215ENST00000534307 PYCR1P32322 319 aa11.86□□□□□ -0.51
SF3B2-215ENST00000534307 ECH1Q13011 328 aa11.86□□□□□ -0.51
SF3B2-215ENST00000534307 FAM98BQ52LJ0 330 aaKnown RBP11.86□□□□□ -0.51
SF3B2-215ENST00000534307 OR2T2Q6IF00 324 aa11.86□□□□□ -0.51
SF3B2-215ENST00000534307 LYPD4Q6UWN0 246 aa11.86□□□□□ -0.51
SF3B2-215ENST00000534307 ADGRG5Q8IZF4 528 aa11.86□□□□□ -0.51
SF3B2-215ENST00000534307 SLC37A3Q8NCC5 494 aa11.86□□□□□ -0.51
SF3B2-215ENST00000534307 OR8G5Q8NG78 346 aa11.86□□□□□ -0.51
SF3B2-215ENST00000534307 OR5L1Q8NGL2 311 aa11.86□□□□□ -0.51
SF3B2-215ENST00000534307 OR4Q3Q8NH05 313 aa11.86□□□□□ -0.51
SF3B2-215ENST00000534307 BCAS4Q8TDM0 211 aa11.86□□□□□ -0.51
SF3B2-215ENST00000534307 CCDC124Q96CT7 223 aaKnown RBP11.86□□□□□ -0.51
SF3B2-215ENST00000534307 PITX2Q99697 317 aa11.86□□□□□ -0.51
SF3B2-215ENST00000534307 ATF6BQ99941 703 aa11.86□□□□□ -0.51
SF3B2-215ENST00000534307 NMNAT2Q9BZQ4 307 aa11.86□□□□□ -0.51
SF3B2-215ENST00000534307 DDX28Q9NUL7 540 aaKnown RBP11.86□□□□□ -0.51
SF3B2-215ENST00000534307 TMEM106BQ9NUM4 274 aa11.86□□□□□ -0.51
SF3B2-215ENST00000534307 TBC1D23Q9NUY8 699 aa11.86□□□□□ -0.51
SF3B2-215ENST00000534307 PTTG3PQ9NZH4 202 aa11.86□□□□□ -0.51
SF3B2-215ENST00000534307 SAMHD1Q9Y3Z3 626 aaKnown RBP11.86□□□□□ -0.51
SF3B2-215ENST00000534307 NPTNQ9Y639 398 aa11.86□□□□□ -0.51
SF3B2-215ENST00000534307 U3KQV3 271 aa11.86□□□□□ -0.51
SF3B2-215ENST00000534307 TRRAPQ9Y4A5 3859 aa11.86□□□□□ -0.51
SF3B2-215ENST00000534307 IQCF6A8MYZ5 107 aa11.85□□□□□ -0.51
SF3B2-215ENST00000534307 PNPP00491 289 aa11.85□□□□□ -0.51
SF3B2-215ENST00000534307 AVPP01185 164 aa11.85□□□□□ -0.51
SF3B2-215ENST00000534307 HLA-DQA2P01906 255 aa11.85□□□□□ -0.51
SF3B2-215ENST00000534307 RAP2AP10114 183 aa11.85□□□□□ -0.51
SF3B2-215ENST00000534307 TNFRSF1AP19438 455 aa11.85□□□□□ -0.51
SF3B2-215ENST00000534307 TNFSF4P23510 183 aa11.85□□□□□ -0.51
SF3B2-215ENST00000534307 OTX1P32242 354 aaPredicted RBP11.85□□□□□ -0.51
SF3B2-215ENST00000534307 TRAP1Q12931 704 aaKnown RBP11.85□□□□□ -0.51
SF3B2-215ENST00000534307 GK3PQ14409 553 aa11.85□□□□□ -0.51
SF3B2-215ENST00000534307 PCK2Q16822 640 aa11.85□□□□□ -0.51
SF3B2-215ENST00000534307 CD300LDQ6UXZ3 194 aa11.85□□□□□ -0.51
SF3B2-215ENST00000534307 TRPM8Q7Z2W7 1104 aa11.85□□□□□ -0.51
SF3B2-215ENST00000534307 NAA40Q86UY6 237 aa11.85□□□□□ -0.51
SF3B2-215ENST00000534307 OR5AS1Q8N127 324 aa11.85□□□□□ -0.51
SF3B2-215ENST00000534307 RFLNBQ8N5W9 214 aa11.85□□□□□ -0.51
SF3B2-215ENST00000534307 PROKR2Q8NFJ6 384 aa11.85□□□□□ -0.51
SF3B2-215ENST00000534307 OR2T4Q8NH00 348 aa11.85□□□□□ -0.51
SF3B2-215ENST00000534307 ITLN1Q8WWA0 313 aa11.85□□□□□ -0.51
SF3B2-215ENST00000534307 OR2V2Q96R30 315 aa11.85□□□□□ -0.51
SF3B2-215ENST00000534307 GAL3ST1Q99999 423 aa11.85□□□□□ -0.51
SF3B2-215ENST00000534307 SLC30A2Q9BRI3 323 aa11.85□□□□□ -0.51
SF3B2-215ENST00000534307 TSSK6Q9BXA6 273 aa11.85□□□□□ -0.51
SF3B2-215ENST00000534307 TMPRSS13Q9BYE2 586 aa11.85□□□□□ -0.51
SF3B2-215ENST00000534307 REEP1Q9H902 201 aa11.85□□□□□ -0.51
SF3B2-215ENST00000534307 COMMD3-BMI1R4GMX3 469 aa11.85□□□□□ -0.51
SF3B2-215ENST00000534307 F5H5K5 113 aa11.84□□□□□ -0.51
SF3B2-215ENST00000534307 SURF4O15260 269 aa11.84□□□□□ -0.51
SF3B2-215ENST00000534307 MLNRO43193 412 aa11.84□□□□□ -0.51
SF3B2-215ENST00000534307 SOX14O95416 240 aa11.84□□□□□ -0.51
SF3B2-215ENST00000534307 ANOS1P23352 680 aa11.84□□□□□ -0.51
SF3B2-215ENST00000534307 SRP14P37108 136 aaKnown RBP11.84□□□□□ -0.51
SF3B2-215ENST00000534307 RPS27P42677 84 aaKnown RBP11.84□□□□□ -0.51
SF3B2-215ENST00000534307 MMP16P51512 607 aa11.84□□□□□ -0.51
SF3B2-215ENST00000534307 SLC25A1P53007 311 aa11.84□□□□□ -0.51
SF3B2-215ENST00000534307 CRMP1Q14194 572 aa11.84□□□□□ -0.51
SF3B2-215ENST00000534307 GK2Q14410 553 aaPredicted RBP11.84□□□□□ -0.51
SF3B2-215ENST00000534307 TMEM155Q4W5P6 130 aa11.84□□□□□ -0.51
SF3B2-215ENST00000534307 PEG10Q86TG7 708 aaKnown RBP11.84□□□□□ -0.51
SF3B2-215ENST00000534307 OR2T33Q8NG76 320 aa11.84□□□□□ -0.51
SF3B2-215ENST00000534307 OR10AD1Q8NGE0 317 aa11.84□□□□□ -0.51
SF3B2-215ENST00000534307 OR51L1Q8NGJ5 315 aa11.84□□□□□ -0.51
SF3B2-215ENST00000534307 OR9Q1Q8NGQ5 310 aa11.84□□□□□ -0.51
SF3B2-215ENST00000534307 OR2AJ1Q8NGZ0 328 aa11.84□□□□□ -0.51
SF3B2-215ENST00000534307 MEGF10Q96KG7 1140 aa11.84□□□□□ -0.51
SF3B2-215ENST00000534307 NIPSNAP1Q9BPW8 284 aa11.84□□□□□ -0.51
SF3B2-215ENST00000534307 THTPAQ9BU02 230 aa11.84□□□□□ -0.51
SF3B2-215ENST00000534307 CHID1Q9BWS9 393 aa11.84□□□□□ -0.51
SF3B2-215ENST00000534307 CDADC1Q9BWV3 514 aa11.84□□□□□ -0.51
SF3B2-215ENST00000534307 WDR76Q9H967 626 aa11.84□□□□□ -0.51
SF3B2-215ENST00000534307 GCM1Q9NP62 436 aa11.84□□□□□ -0.51
SF3B2-215ENST00000534307 ARMC1Q9NVT9 282 aa11.84□□□□□ -0.51
SF3B2-215ENST00000534307 BAIAP2Q9UQB8 552 aa11.84□□□□□ -0.51
SF3B2-215ENST00000534307 PPP1R3CQ9UQK1 317 aa11.84□□□□□ -0.51
SF3B2-215ENST00000534307 WNK2Q9Y3S1 2297 aa11.84□□□□□ -0.51
SF3B2-215ENST00000534307 ARHGAP32A7KAX9 2087 aa11.83□□□□□ -0.51
SF3B2-215ENST00000534307 A0A0G2JMP0 313 aa11.83□□□□□ -0.52
SF3B2-215ENST00000534307 A0A0X1KG70 313 aa11.83□□□□□ -0.52
SF3B2-215ENST00000534307 ISPDA4D126 451 aa11.83□□□□□ -0.52
SF3B2-215ENST00000534307 ARRDC5A6NEK1 342 aa11.83□□□□□ -0.52
SF3B2-215ENST00000534307 TVP23AA6NH52 213 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms