RNA–Protein interactions for RNA: ENST00000533953.5

CMTM1-219, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 934 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-219ENST00000533953 C10orf105Q8TEF2 133 aa11.43□□□□□ -0.58
CMTM1-219ENST00000533953 FAM168AQ92567 244 aa11.43□□□□□ -0.58
CMTM1-219ENST00000533953 COX4I2Q96KJ9 171 aa11.43□□□□□ -0.58
CMTM1-219ENST00000533953 ABHD6Q9BV23 337 aa11.43□□□□□ -0.58
CMTM1-219ENST00000533953 TREM2Q9NZC2 230 aa11.43□□□□□ -0.58
CMTM1-219ENST00000533953 MED13LQ71F56 2210 aa11.43□□□□□ -0.58
CMTM1-219ENST00000533953 MTORP42345 2549 aa11.42□□□□□ -0.58
CMTM1-219ENST00000533953 C17orf100A8MU93 164 aa11.42□□□□□ -0.58
CMTM1-219ENST00000533953 CDC14BO60729 498 aa11.42□□□□□ -0.58
CMTM1-219ENST00000533953 LILRA1O75019 489 aa11.42□□□□□ -0.58
CMTM1-219ENST00000533953 LY6G6DO95868 133 aa11.42□□□□□ -0.58
CMTM1-219ENST00000533953 LCATP04180 440 aa11.42□□□□□ -0.58
CMTM1-219ENST00000533953 MMP15P51511 669 aa11.42□□□□□ -0.58
CMTM1-219ENST00000533953 EFNB1P98172 346 aa11.42□□□□□ -0.58
CMTM1-219ENST00000533953 TAF13Q15543 124 aa11.42□□□□□ -0.58
CMTM1-219ENST00000533953 ZSCAN26Q16670 478 aa11.42□□□□□ -0.58
CMTM1-219ENST00000533953 TEX30Q5JUR7 227 aa11.42□□□□□ -0.58
CMTM1-219ENST00000533953 OR2T2Q6IF00 324 aa11.42□□□□□ -0.58
CMTM1-219ENST00000533953 PQLC1Q8N2U9 271 aa11.42□□□□□ -0.58
CMTM1-219ENST00000533953 UBASH3BQ8TF42 649 aa11.42□□□□□ -0.58
CMTM1-219ENST00000533953 TEAD3Q99594 435 aa11.42□□□□□ -0.58
CMTM1-219ENST00000533953 RBM4BQ9BQ04 359 aaKnown RBP11.42□□□□□ -0.58
CMTM1-219ENST00000533953 COPS4Q9BT78 406 aa11.42□□□□□ -0.58
CMTM1-219ENST00000533953 MS4A5Q9H3V2 200 aa11.42□□□□□ -0.58
CMTM1-219ENST00000533953 MARCH7Q9H992 704 aa11.42□□□□□ -0.58
CMTM1-219ENST00000533953 SLCO1C1Q9NYB5 712 aa11.42□□□□□ -0.58
CMTM1-219ENST00000533953 AASSQ9UDR5 926 aa11.42□□□□□ -0.58
CMTM1-219ENST00000533953 PURGQ9UJV8 347 aaKnown RBP11.42□□□□□ -0.58
CMTM1-219ENST00000533953 CACNG2Q9Y698 323 aa11.42□□□□□ -0.58
CMTM1-219ENST00000533953 VPS13CQ709C8 3753 aa11.41□□□□□ -0.58
CMTM1-219ENST00000533953 A0A096LNT2 108 aa11.41□□□□□ -0.58
CMTM1-219ENST00000533953 M0R135 149 aa11.41□□□□□ -0.58
CMTM1-219ENST00000533953 PSMD9O00233 223 aa11.41□□□□□ -0.58
CMTM1-219ENST00000533953 TIMM8AO60220 97 aaPredicted RBP11.41□□□□□ -0.58
CMTM1-219ENST00000533953 IGHV1-46P01743 117 aa11.41□□□□□ -0.58
CMTM1-219ENST00000533953 ALPLP05186 524 aa11.41□□□□□ -0.58
CMTM1-219ENST00000533953 SLC6A9P48067 706 aa11.41□□□□□ -0.58
CMTM1-219ENST00000533953 PDLIM4P50479 330 aa11.41□□□□□ -0.58
CMTM1-219ENST00000533953 ZNF81P51508 661 aa11.41□□□□□ -0.58
CMTM1-219ENST00000533953 TPTEP56180 551 aa11.41□□□□□ -0.58
CMTM1-219ENST00000533953 ECH1Q13011 328 aa11.41□□□□□ -0.58
CMTM1-219ENST00000533953 SNAI3Q3KNW1 292 aa11.41□□□□□ -0.58
CMTM1-219ENST00000533953 AADACL4Q5VUY2 407 aa11.41□□□□□ -0.58
CMTM1-219ENST00000533953 Q6ZR03 302 aa11.41□□□□□ -0.58
CMTM1-219ENST00000533953 COLCA1Q6ZS62 124 aa11.41□□□□□ -0.58
CMTM1-219ENST00000533953 THEM6Q8WUY1 208 aa11.41□□□□□ -0.58
CMTM1-219ENST00000533953 NEU4Q8WWR8 484 aaPredicted RBP11.41□□□□□ -0.58
CMTM1-219ENST00000533953 YIPF5Q969M3 257 aa11.41□□□□□ -0.58
CMTM1-219ENST00000533953 APOBEC3DQ96AK3 386 aaPredicted RBP11.41□□□□□ -0.58
CMTM1-219ENST00000533953 HAVCR1Q96D42 359 aa11.41□□□□□ -0.58
CMTM1-219ENST00000533953 ZNF799Q96GE5 643 aa11.41□□□□□ -0.58
CMTM1-219ENST00000533953 DCLRE1CQ96SD1 692 aaKnown RBP11.41□□□□□ -0.58
CMTM1-219ENST00000533953 C1QTNF5Q9BXJ0 243 aa11.41□□□□□ -0.58
CMTM1-219ENST00000533953 TEX12Q9BXU0 123 aa11.41□□□□□ -0.58
CMTM1-219ENST00000533953 GABARAPL3Q9BY60 117 aa11.41□□□□□ -0.58
CMTM1-219ENST00000533953 TTTY10Q9BZA0 68 aa11.41□□□□□ -0.58
CMTM1-219ENST00000533953 DDX28Q9NUL7 540 aaKnown RBP11.41□□□□□ -0.58
CMTM1-219ENST00000533953 ATPIF1Q9UII2 106 aa11.41□□□□□ -0.58
CMTM1-219ENST00000533953 ZNF469Q96JG9 3925 aaPredicted RBP11.4□□□□□ -0.58
CMTM1-219ENST00000533953 IGHV3-64DA0A0J9YX35 117 aa11.4□□□□□ -0.58
CMTM1-219ENST00000533953 ERICH4A6NGS2 130 aa11.4□□□□□ -0.58
CMTM1-219ENST00000533953 PRR32B1ATL7 298 aa11.4□□□□□ -0.58
CMTM1-219ENST00000533953 MAGEB4O15481 346 aaPredicted RBP11.4□□□□□ -0.58
CMTM1-219ENST00000533953 TPD52L2O43399 206 aaKnown RBP11.4□□□□□ -0.58
CMTM1-219ENST00000533953 APOL3O95236 402 aa11.4□□□□□ -0.58
CMTM1-219ENST00000533953 FOSL1P15407 271 aa11.4□□□□□ -0.58
CMTM1-219ENST00000533953 BLVRAP53004 296 aa11.4□□□□□ -0.58
CMTM1-219ENST00000533953 GGTLC2Q14390 218 aa11.4□□□□□ -0.58
CMTM1-219ENST00000533953 CLEC9AQ6UXN8 241 aa11.4□□□□□ -0.58
CMTM1-219ENST00000533953 UNQ6126/PRO20091Q6UXV3 157 aa11.4□□□□□ -0.58
CMTM1-219ENST00000533953 MEPCEQ7L2J0 689 aaKnown RBP11.4□□□□□ -0.58
CMTM1-219ENST00000533953 C10orf67Q8IYJ2 551 aa11.4□□□□□ -0.58
CMTM1-219ENST00000533953 RFLNBQ8N5W9 214 aa11.4□□□□□ -0.58
CMTM1-219ENST00000533953 BHLHE23Q8NDY6 225 aa11.4□□□□□ -0.58
CMTM1-219ENST00000533953 OR2AE1Q8NHA4 323 aa11.4□□□□□ -0.58
CMTM1-219ENST00000533953 TMEM163Q8TC26 289 aa11.4□□□□□ -0.58
CMTM1-219ENST00000533953 SNX33Q8WV41 574 aa11.4□□□□□ -0.58
CMTM1-219ENST00000533953 MBOAT4Q96T53 435 aa11.4□□□□□ -0.58
CMTM1-219ENST00000533953 BRD7Q9NPI1 651 aa11.4□□□□□ -0.58
CMTM1-219ENST00000533953 USE1Q9NZ43 259 aa11.4□□□□□ -0.58
CMTM1-219ENST00000533953 DNAJC27Q9NZQ0 273 aa11.4□□□□□ -0.58
CMTM1-219ENST00000533953 COPS3Q9UNS2 423 aa11.4□□□□□ -0.58
CMTM1-219ENST00000533953 CSPG4Q6UVK1 2322 aa11.4□□□□□ -0.59
CMTM1-219ENST00000533953 IGHV4-61A0A0C4DH41 118 aa11.39□□□□□ -0.59
CMTM1-219ENST00000533953 VWC2LB2RUY7 222 aa11.39□□□□□ -0.59
CMTM1-219ENST00000533953 H0YL77 283 aa11.39□□□□□ -0.59
CMTM1-219ENST00000533953 PRODHO43272 600 aa11.39□□□□□ -0.59
CMTM1-219ENST00000533953 ERCC1P07992 297 aaPredicted RBP11.39□□□□□ -0.59
CMTM1-219ENST00000533953 NR4A2P43354 598 aa11.39□□□□□ -0.59
CMTM1-219ENST00000533953 RGS6P49758 472 aa11.39□□□□□ -0.59
CMTM1-219ENST00000533953 ALDH3A2P51648 485 aa11.39□□□□□ -0.59
CMTM1-219ENST00000533953 DSCR9P59020 149 aa11.39□□□□□ -0.59
CMTM1-219ENST00000533953 ZNF92Q03936 586 aa11.39□□□□□ -0.59
CMTM1-219ENST00000533953 GABPB1Q06547 395 aaPredicted RBP11.39□□□□□ -0.59
CMTM1-219ENST00000533953 KRTAP1-1Q07627 177 aa11.39□□□□□ -0.59
CMTM1-219ENST00000533953 GK2Q14410 553 aaPredicted RBP11.39□□□□□ -0.59
CMTM1-219ENST00000533953 TRIP10Q15642 601 aa11.39□□□□□ -0.59
CMTM1-219ENST00000533953 LRRC36Q1X8D7 754 aa11.39□□□□□ -0.59
CMTM1-219ENST00000533953 SLC35D3Q5M8T2 416 aa11.39□□□□□ -0.59
CMTM1-219ENST00000533953 LRRN1Q6UXK5 716 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms