RNA–Protein interactions for RNA: ENST00000532285.1

CAPN1-222, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-222ENST00000532285 COLCA1Q6ZS62 124 aa19.53■□□□□ 0.72
CAPN1-222ENST00000532285 HS3ST5Q8IZT8 346 aa19.53■□□□□ 0.72
CAPN1-222ENST00000532285 IQCF1Q8N6M8 205 aa19.53■□□□□ 0.72
CAPN1-222ENST00000532285 NRBF2Q96F24 287 aa19.53■□□□□ 0.72
CAPN1-222ENST00000532285 MAP6Q96JE9 813 aa19.53■□□□□ 0.72
CAPN1-222ENST00000532285 C1QTNF5Q9BXJ0 243 aa19.53■□□□□ 0.72
CAPN1-222ENST00000532285 COMMD3-BMI1R4GMX3 469 aa19.53■□□□□ 0.72
CAPN1-222ENST00000532285 JMJD1CQ15652 2540 aa19.53■□□□□ 0.72
CAPN1-222ENST00000532285 F5H5K5 113 aa19.52■□□□□ 0.72
CAPN1-222ENST00000532285 TGFAP01135 160 aa19.52■□□□□ 0.72
CAPN1-222ENST00000532285 ACSM4P0C7M7 580 aa19.52■□□□□ 0.72
CAPN1-222ENST00000532285 IL2RGP31785 369 aa19.52■□□□□ 0.72
CAPN1-222ENST00000532285 ENTPD1P49961 510 aa19.52■□□□□ 0.72
CAPN1-222ENST00000532285 SHQ1Q6PI26 577 aaKnown RBP19.52■□□□□ 0.72
CAPN1-222ENST00000532285 ATG16L2Q8NAA4 619 aa19.52■□□□□ 0.72
CAPN1-222ENST00000532285 OR6K6Q8NGW6 343 aa19.52■□□□□ 0.72
CAPN1-222ENST00000532285 SOX7Q9BT81 388 aa19.52■□□□□ 0.72
CAPN1-222ENST00000532285 WDR76Q9H967 626 aa19.52■□□□□ 0.72
CAPN1-222ENST00000532285 NTN4Q9HB63 628 aa19.52■□□□□ 0.72
CAPN1-222ENST00000532285 PTTG3PQ9NZH4 202 aa19.52■□□□□ 0.72
CAPN1-222ENST00000532285 CDC42EP3Q9UKI2 254 aa19.52■□□□□ 0.72
CAPN1-222ENST00000532285 KCNS2Q9ULS6 477 aa19.52■□□□□ 0.72
CAPN1-222ENST00000532285 DYSFO75923 2080 aa19.52■□□□□ 0.71
CAPN1-222ENST00000532285 TIPRLO75663 272 aa19.51■□□□□ 0.71
CAPN1-222ENST00000532285 CLUP10909 449 aa19.51■□□□□ 0.71
CAPN1-222ENST00000532285 PAICSP22234 425 aaKnown RBP19.51■□□□□ 0.71
CAPN1-222ENST00000532285 TNFSF4P23510 183 aa19.51■□□□□ 0.71
CAPN1-222ENST00000532285 RPS27P42677 84 aaKnown RBP19.51■□□□□ 0.71
CAPN1-222ENST00000532285 TPTEP56180 551 aa19.51■□□□□ 0.71
CAPN1-222ENST00000532285 GINS1Q14691 196 aa19.51■□□□□ 0.71
CAPN1-222ENST00000532285 HLXQ14774 488 aaPredicted RBP19.51■□□□□ 0.71
CAPN1-222ENST00000532285 PCK2Q16822 640 aa19.51■□□□□ 0.71
CAPN1-222ENST00000532285 CHRFAM7AQ494W8 412 aa19.51■□□□□ 0.71
CAPN1-222ENST00000532285 TEX30Q5JUR7 227 aa19.51■□□□□ 0.71
CAPN1-222ENST00000532285 ACSM5Q6NUN0 579 aa19.51■□□□□ 0.71
CAPN1-222ENST00000532285 LYPD4Q6UWN0 246 aa19.51■□□□□ 0.71
CAPN1-222ENST00000532285 LINC01356Q8N9X3 169 aa19.51■□□□□ 0.71
CAPN1-222ENST00000532285 ZNF511Q8NB15 262 aa19.51■□□□□ 0.71
CAPN1-222ENST00000532285 DNAJC9Q8WXX5 260 aa19.51■□□□□ 0.71
CAPN1-222ENST00000532285 SPTSSAQ969W0 71 aa19.51■□□□□ 0.71
CAPN1-222ENST00000532285 UTP4Q969X6 686 aaKnown RBP19.51■□□□□ 0.71
CAPN1-222ENST00000532285 C1orf159Q96HA4 380 aa19.51■□□□□ 0.71
CAPN1-222ENST00000532285 ZNF593O00488 134 aaPredicted RBP19.5■□□□□ 0.71
CAPN1-222ENST00000532285 HMGN1P05114 100 aa19.5■□□□□ 0.71
CAPN1-222ENST00000532285 TNFAIP6P98066 277 aaPredicted RBP19.5■□□□□ 0.71
CAPN1-222ENST00000532285 CDK5Q00535 292 aa19.5■□□□□ 0.71
CAPN1-222ENST00000532285 CCNIQ14094 377 aa19.5■□□□□ 0.71
CAPN1-222ENST00000532285 C1orf146Q5VVC0 180 aa19.5■□□□□ 0.71
CAPN1-222ENST00000532285 Q6ZR03 302 aa19.5■□□□□ 0.71
CAPN1-222ENST00000532285 DCXRQ7Z4W1 244 aa19.5■□□□□ 0.71
CAPN1-222ENST00000532285 PRIMA1Q86XR5 153 aa19.5■□□□□ 0.71
CAPN1-222ENST00000532285 OR10S1Q8NGN2 331 aa19.5■□□□□ 0.71
CAPN1-222ENST00000532285 CLDND2Q8NHS1 167 aa19.5■□□□□ 0.71
CAPN1-222ENST00000532285 NARFLQ9H6Q4 476 aa19.5■□□□□ 0.71
CAPN1-222ENST00000532285 MED20Q9H944 212 aa19.5■□□□□ 0.71
CAPN1-222ENST00000532285 DDX28Q9NUL7 540 aaKnown RBP19.5■□□□□ 0.71
CAPN1-222ENST00000532285 FAM183AA6NL82 134 aa19.49■□□□□ 0.71
CAPN1-222ENST00000532285 CLDN25C9JDP6 229 aa19.49■□□□□ 0.71
CAPN1-222ENST00000532285 LCATP04180 440 aa19.49■□□□□ 0.71
CAPN1-222ENST00000532285 SPARCP09486 303 aa19.49■□□□□ 0.71
CAPN1-222ENST00000532285 NAA40Q86UY6 237 aa19.49■□□□□ 0.71
CAPN1-222ENST00000532285 OR2Z1Q8NG97 314 aa19.49■□□□□ 0.71
CAPN1-222ENST00000532285 CCL17Q92583 94 aa19.49■□□□□ 0.71
CAPN1-222ENST00000532285 OTULINQ96BN8 352 aa19.49■□□□□ 0.71
CAPN1-222ENST00000532285 TIMD4Q96H15 378 aa19.49■□□□□ 0.71
CAPN1-222ENST00000532285 HCAR1Q9BXC0 346 aa19.49■□□□□ 0.71
CAPN1-222ENST00000532285 TEX12Q9BXU0 123 aa19.49■□□□□ 0.71
CAPN1-222ENST00000532285 KIF17Q9P2E2 1029 aa19.49■□□□□ 0.71
CAPN1-222ENST00000532285 LPAR3Q9UBY5 353 aa19.49■□□□□ 0.71
CAPN1-222ENST00000532285 CACNG2Q9Y698 323 aa19.49■□□□□ 0.71
CAPN1-222ENST00000532285 M0R135 149 aa19.48■□□□□ 0.71
CAPN1-222ENST00000532285 PSKH1P11801 424 aa19.48■□□□□ 0.71
CAPN1-222ENST00000532285 CDH15P55291 814 aa19.48■□□□□ 0.71
CAPN1-222ENST00000532285 SLC3A1Q07837 685 aa19.48■□□□□ 0.71
CAPN1-222ENST00000532285 MALLQ13021 153 aa19.48■□□□□ 0.71
CAPN1-222ENST00000532285 LINC01590Q5TEZ4 76 aa19.48■□□□□ 0.71
CAPN1-222ENST00000532285 OR2T2Q6IF00 324 aa19.48■□□□□ 0.71
CAPN1-222ENST00000532285 OR5AS1Q8N127 324 aa19.48■□□□□ 0.71
CAPN1-222ENST00000532285 OR8G5Q8NG78 346 aa19.48■□□□□ 0.71
CAPN1-222ENST00000532285 OR5K1Q8NHB7 308 aa19.48■□□□□ 0.71
CAPN1-222ENST00000532285 RAB1CQ92928 201 aa19.48■□□□□ 0.71
CAPN1-222ENST00000532285 ZNF799Q96GE5 643 aa19.48■□□□□ 0.71
CAPN1-222ENST00000532285 ZNF582Q96NG8 517 aaPredicted RBP19.48■□□□□ 0.71
CAPN1-222ENST00000532285 BEX2Q9BXY8 128 aa19.48■□□□□ 0.71
CAPN1-222ENST00000532285 SHARPINQ9H0F6 387 aa19.48■□□□□ 0.71
CAPN1-222ENST00000532285 AP4S1Q9Y587 144 aa19.48■□□□□ 0.71
CAPN1-222ENST00000532285 B4DSR2 109 aa19.47■□□□□ 0.71
CAPN1-222ENST00000532285 PRR23D1E9PI22 279 aaPredicted RBP19.47■□□□□ 0.71
CAPN1-222ENST00000532285 WNT9BO14905 357 aa19.47■□□□□ 0.71
CAPN1-222ENST00000532285 SURF4O15260 269 aa19.47■□□□□ 0.71
CAPN1-222ENST00000532285 GLCEO94923 617 aa19.47■□□□□ 0.71
CAPN1-222ENST00000532285 PRR23D2P0DMB1 279 aaPredicted RBP19.47■□□□□ 0.71
CAPN1-222ENST00000532285 SELEP16581 610 aa19.47■□□□□ 0.71
CAPN1-222ENST00000532285 TNFRSF1AP19438 455 aa19.47■□□□□ 0.71
CAPN1-222ENST00000532285 IGFBP5P24593 272 aa19.47■□□□□ 0.71
CAPN1-222ENST00000532285 GSTT1P30711 240 aa19.47■□□□□ 0.71
CAPN1-222ENST00000532285 OTX1P32242 354 aaPredicted RBP19.47■□□□□ 0.71
CAPN1-222ENST00000532285 MVKQ03426 396 aa19.47■□□□□ 0.71
CAPN1-222ENST00000532285 TAF13Q15543 124 aa19.47■□□□□ 0.71
CAPN1-222ENST00000532285 ATP6AP1Q15904 470 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms