RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 RGS6P49758 472 aa10.84□□□□□ -0.67
COPB1-208ENST00000532088 GDI2P50395 445 aaKnown RBP10.84□□□□□ -0.67
COPB1-208ENST00000532088 IDH3GP51553 393 aaPredicted RBP10.84□□□□□ -0.67
COPB1-208ENST00000532088 NAAAQ02083 359 aa10.84□□□□□ -0.67
COPB1-208ENST00000532088 CDONQ4KMG0 1287 aa10.84□□□□□ -0.67
COPB1-208ENST00000532088 NCMAPQ5T1S8 102 aa10.84□□□□□ -0.67
COPB1-208ENST00000532088 OTPQ5XKR4 325 aa10.84□□□□□ -0.67
COPB1-208ENST00000532088 UNQ6126/PRO20091Q6UXV3 157 aa10.84□□□□□ -0.67
COPB1-208ENST00000532088 MEX3BQ6ZN04 569 aaKnown RBP10.84□□□□□ -0.67
COPB1-208ENST00000532088 PLEKHG7Q6ZR37 379 aa10.84□□□□□ -0.67
COPB1-208ENST00000532088 AHSA2Q719I0 299 aa10.84□□□□□ -0.67
COPB1-208ENST00000532088 PRSS48Q7RTY5 328 aa10.84□□□□□ -0.67
COPB1-208ENST00000532088 KRT77Q7Z794 578 aa10.84□□□□□ -0.67
COPB1-208ENST00000532088 AKR7LQ8NHP1 331 aa10.84□□□□□ -0.67
COPB1-208ENST00000532088 WFDC12Q8WWY7 111 aa10.84□□□□□ -0.67
COPB1-208ENST00000532088 PSMG3-AS1Q96PY0 264 aa10.84□□□□□ -0.67
COPB1-208ENST00000532088 NR1H4Q96RI1 486 aaPredicted RBP10.84□□□□□ -0.67
COPB1-208ENST00000532088 AMELYQ99218 206 aa10.84□□□□□ -0.67
COPB1-208ENST00000532088 KCNJ15Q99712 375 aa10.84□□□□□ -0.67
COPB1-208ENST00000532088 CDCA4Q9BXL8 241 aa10.84□□□□□ -0.67
COPB1-208ENST00000532088 SP140LQ9H930 580 aa10.84□□□□□ -0.67
COPB1-208ENST00000532088 ERVK13-1Q9NX77 482 aa10.84□□□□□ -0.67
COPB1-208ENST00000532088 CRIM1Q9NZV1 1036 aa10.84□□□□□ -0.67
COPB1-208ENST00000532088 KLHDC2Q9Y2U9 406 aa10.84□□□□□ -0.67
COPB1-208ENST00000532088 CAB39Q9Y376 341 aaPredicted RBP10.84□□□□□ -0.67
COPB1-208ENST00000532088 PCDHGB5Q9Y5G0 923 aa10.84□□□□□ -0.67
COPB1-208ENST00000532088 TMEM129A0AVI4 362 aa10.83□□□□□ -0.68
COPB1-208ENST00000532088 METTL15A6NJ78 407 aa10.83□□□□□ -0.68
COPB1-208ENST00000532088 M0R1B8 84 aa10.83□□□□□ -0.68
COPB1-208ENST00000532088 RGS10O43665 173 aa10.83□□□□□ -0.68
COPB1-208ENST00000532088 APOL3O95236 402 aa10.83□□□□□ -0.68
COPB1-208ENST00000532088 TNFAIP8O95379 198 aa10.83□□□□□ -0.68
COPB1-208ENST00000532088 ABHD16AO95870 558 aa10.83□□□□□ -0.68
COPB1-208ENST00000532088 KRT8P05787 483 aa10.83□□□□□ -0.68
COPB1-208ENST00000532088 TACSTD2P09758 323 aa10.83□□□□□ -0.68
COPB1-208ENST00000532088 H2BFMP0C1H6 154 aa10.83□□□□□ -0.68
COPB1-208ENST00000532088 ZNF35P13682 527 aa10.83□□□□□ -0.68
COPB1-208ENST00000532088 TUBG1P23258 451 aa10.83□□□□□ -0.68
COPB1-208ENST00000532088 VAMP1P23763 118 aa10.83□□□□□ -0.68
COPB1-208ENST00000532088 APEX1P27695 318 aaKnown RBP10.83□□□□□ -0.68
COPB1-208ENST00000532088 ZNF83P51522 516 aa10.83□□□□□ -0.68
COPB1-208ENST00000532088 CHN2P52757 468 aa10.83□□□□□ -0.68
COPB1-208ENST00000532088 RIDAP52758 137 aaKnown RBP10.83□□□□□ -0.68
COPB1-208ENST00000532088 HCCSP53701 268 aa10.83□□□□□ -0.68
COPB1-208ENST00000532088 TPTEP56180 551 aa10.83□□□□□ -0.68
COPB1-208ENST00000532088 ARL9Q6T311 187 aa10.83□□□□□ -0.68
COPB1-208ENST00000532088 DRAM2Q6UX65 266 aa10.83□□□□□ -0.68
COPB1-208ENST00000532088 Q6ZS46 218 aa10.83□□□□□ -0.68
COPB1-208ENST00000532088 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.83□□□□□ -0.68
COPB1-208ENST00000532088 OR52N1Q8NH53 320 aa10.83□□□□□ -0.68
COPB1-208ENST00000532088 SNX33Q8WV41 574 aa10.83□□□□□ -0.68
COPB1-208ENST00000532088 COG8Q96MW5 612 aa10.83□□□□□ -0.68
COPB1-208ENST00000532088 ALG8Q9BVK2 526 aa10.83□□□□□ -0.68
COPB1-208ENST00000532088 TUBG2Q9NRH3 451 aa10.83□□□□□ -0.68
COPB1-208ENST00000532088 CENPMQ9NSP4 180 aa10.83□□□□□ -0.68
COPB1-208ENST00000532088 TBCCD1Q9NVR7 557 aa10.83□□□□□ -0.68
COPB1-208ENST00000532088 PAK1IP1Q9NWT1 392 aaPredicted RBP10.83□□□□□ -0.68
COPB1-208ENST00000532088 MYO18BQ8IUG5 2567 aa10.83□□□□□ -0.68
COPB1-208ENST00000532088 LOC100509620A0A075B734 347 aa10.82□□□□□ -0.68
COPB1-208ENST00000532088 IGHV2OR16-5A0A0B4J2B6 119 aa10.82□□□□□ -0.68
COPB1-208ENST00000532088 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.82□□□□□ -0.68
COPB1-208ENST00000532088 DPRXA6NFQ7 191 aa10.82□□□□□ -0.68
COPB1-208ENST00000532088 PTGES3LE9PB15 166 aa10.82□□□□□ -0.68
COPB1-208ENST00000532088 M0R135 149 aa10.82□□□□□ -0.68
COPB1-208ENST00000532088 ALX3O95076 343 aa10.82□□□□□ -0.68
COPB1-208ENST00000532088 CRYAAP02489 173 aa10.82□□□□□ -0.68
COPB1-208ENST00000532088 ACSM4P0C7M7 580 aa10.82□□□□□ -0.68
COPB1-208ENST00000532088 LIMS3P0CW19 117 aa10.82□□□□□ -0.68
COPB1-208ENST00000532088 LIMS4P0CW20 117 aa10.82□□□□□ -0.68
COPB1-208ENST00000532088 HSD11B1P28845 292 aa10.82□□□□□ -0.68
COPB1-208ENST00000532088 IRF3Q14653 427 aa10.82□□□□□ -0.68
COPB1-208ENST00000532088 TAF13Q15543 124 aa10.82□□□□□ -0.68
COPB1-208ENST00000532088 RSPO1Q2MKA7 263 aaPredicted RBP10.82□□□□□ -0.68
COPB1-208ENST00000532088 ZNF829Q3KNS6 432 aaPredicted RBP10.82□□□□□ -0.68
COPB1-208ENST00000532088 TMEM154Q6P9G4 183 aa10.82□□□□□ -0.68
COPB1-208ENST00000532088 TMPRSS11AQ6ZMR5 421 aa10.82□□□□□ -0.68
COPB1-208ENST00000532088 COLCA1Q6ZS62 124 aa10.82□□□□□ -0.68
COPB1-208ENST00000532088 SSX6Q7RTT6 188 aa10.82□□□□□ -0.68
COPB1-208ENST00000532088 FAM220AQ7Z4H9 259 aa10.82□□□□□ -0.68
COPB1-208ENST00000532088 KLHL36Q8N4N3 616 aa10.82□□□□□ -0.68
COPB1-208ENST00000532088 RFLNBQ8N5W9 214 aa10.82□□□□□ -0.68
COPB1-208ENST00000532088 SMAP2Q8WU79 429 aaPredicted RBP10.82□□□□□ -0.68
COPB1-208ENST00000532088 ITFG2Q969R8 447 aa10.82□□□□□ -0.68
COPB1-208ENST00000532088 ZNF799Q96GE5 643 aa10.82□□□□□ -0.68
COPB1-208ENST00000532088 ZC3HAV1LQ96H79 300 aaKnown RBP10.82□□□□□ -0.68
COPB1-208ENST00000532088 TBX5Q99593 518 aa10.82□□□□□ -0.68
COPB1-208ENST00000532088 KCNS3Q9BQ31 491 aa10.82□□□□□ -0.68
COPB1-208ENST00000532088 RHNO1Q9BSD3 238 aa10.82□□□□□ -0.68
COPB1-208ENST00000532088 TMEM204Q9BSN7 226 aa10.82□□□□□ -0.68
COPB1-208ENST00000532088 C1QTNF5Q9BXJ0 243 aa10.82□□□□□ -0.68
COPB1-208ENST00000532088 TMPRSS13Q9BYE2 586 aa10.82□□□□□ -0.68
COPB1-208ENST00000532088 ZNF696Q9H7X3 374 aa10.82□□□□□ -0.68
COPB1-208ENST00000532088 MOB1AQ9H8S9 216 aa10.82□□□□□ -0.68
COPB1-208ENST00000532088 ELOVL3Q9HB03 270 aa10.82□□□□□ -0.68
COPB1-208ENST00000532088 CDH20Q9HBT6 801 aa10.82□□□□□ -0.68
COPB1-208ENST00000532088 SLCO1C1Q9NYB5 712 aa10.82□□□□□ -0.68
COPB1-208ENST00000532088 EIF3KQ9UBQ5 218 aaKnown RBP10.82□□□□□ -0.68
COPB1-208ENST00000532088 MRM2Q9UI43 246 aaKnown RBP10.82□□□□□ -0.68
COPB1-208ENST00000532088 ERGIC3Q9Y282 383 aa10.82□□□□□ -0.68
COPB1-208ENST00000532088 LRP12Q9Y561 859 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms