RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 KRTAP27-1Q3LI81 207 aa14.13□□□□□ -0.15
CPSF1-207ENST00000531727 ESCO2Q56NI9 601 aa14.13□□□□□ -0.15
CPSF1-207ENST00000531727 COLCA1Q6ZS62 124 aa14.13□□□□□ -0.15
CPSF1-207ENST00000531727 ZMYND19Q96E35 227 aaPredicted RBP14.13□□□□□ -0.15
CPSF1-207ENST00000531727 NMNAT3Q96T66 252 aa14.13□□□□□ -0.15
CPSF1-207ENST00000531727 SLC30A2Q9BRI3 323 aa14.13□□□□□ -0.15
CPSF1-207ENST00000531727 MRI1Q9BV20 369 aa14.13□□□□□ -0.15
CPSF1-207ENST00000531727 MAGEL2Q9UJ55 1249 aa14.13□□□□□ -0.15
CPSF1-207ENST00000531727 NUP50Q9UKX7 468 aa14.13□□□□□ -0.15
CPSF1-207ENST00000531727 LRCH1Q9Y2L9 728 aa14.13□□□□□ -0.15
CPSF1-207ENST00000531727 WNK2Q9Y3S1 2297 aa14.12□□□□□ -0.15
CPSF1-207ENST00000531727 A0A1B0GWJ7 208 aa14.12□□□□□ -0.15
CPSF1-207ENST00000531727 CEACAM18A8MTB9 384 aa14.12□□□□□ -0.15
CPSF1-207ENST00000531727 H0YL77 283 aa14.12□□□□□ -0.15
CPSF1-207ENST00000531727 MLNRO43193 412 aa14.12□□□□□ -0.15
CPSF1-207ENST00000531727 WNT2P09544 360 aa14.12□□□□□ -0.15
CPSF1-207ENST00000531727 HSD17B1P14061 328 aa14.12□□□□□ -0.15
CPSF1-207ENST00000531727 CPT2P23786 658 aa14.12□□□□□ -0.15
CPSF1-207ENST00000531727 SLC36A3Q495N2 470 aa14.12□□□□□ -0.15
CPSF1-207ENST00000531727 KLF17Q5JT82 389 aaPredicted RBP14.12□□□□□ -0.15
CPSF1-207ENST00000531727 SLC18B1Q6NT16 456 aa14.12□□□□□ -0.15
CPSF1-207ENST00000531727 CFAP77Q6ZQR2 320 aa14.12□□□□□ -0.15
CPSF1-207ENST00000531727 ZBTB46Q86UZ6 589 aa14.12□□□□□ -0.15
CPSF1-207ENST00000531727 OR4K13Q8NH42 304 aa14.12□□□□□ -0.15
CPSF1-207ENST00000531727 ZNF420Q8TAQ5 688 aaPredicted RBP14.12□□□□□ -0.15
CPSF1-207ENST00000531727 IFT27Q9BW83 186 aa14.12□□□□□ -0.15
CPSF1-207ENST00000531727 C1QTNF5Q9BXJ0 243 aa14.12□□□□□ -0.15
CPSF1-207ENST00000531727 RPRD1BQ9NQG5 326 aaKnown RBP14.12□□□□□ -0.15
CPSF1-207ENST00000531727 DDX28Q9NUL7 540 aaKnown RBP14.12□□□□□ -0.15
CPSF1-207ENST00000531727 OR5V1Q9UGF6 321 aa14.12□□□□□ -0.15
CPSF1-207ENST00000531727 PPIAL4AQ9Y536 164 aa14.12□□□□□ -0.15
CPSF1-207ENST00000531727 F5H5P2 479 aa14.11□□□□□ -0.15
CPSF1-207ENST00000531727 OR10H3O60404 316 aa14.11□□□□□ -0.15
CPSF1-207ENST00000531727 CYB5R3P00387 301 aaPredicted RBP14.11□□□□□ -0.15
CPSF1-207ENST00000531727 SELEP16581 610 aa14.11□□□□□ -0.15
CPSF1-207ENST00000531727 IFNGR2P38484 337 aa14.11□□□□□ -0.15
CPSF1-207ENST00000531727 GSSP48637 474 aa14.11□□□□□ -0.15
CPSF1-207ENST00000531727 DBPQ10586 325 aaPredicted RBP14.11□□□□□ -0.15
CPSF1-207ENST00000531727 ECH1Q13011 328 aa14.11□□□□□ -0.15
CPSF1-207ENST00000531727 ZNF181Q2M3W8 571 aa14.11□□□□□ -0.15
CPSF1-207ENST00000531727 RBMS3Q6XE24 437 aaKnown RBP14.11□□□□□ -0.15
CPSF1-207ENST00000531727 DOK3Q7L591 496 aa14.11□□□□□ -0.15
CPSF1-207ENST00000531727 LINC00346Q8IVM7 164 aa14.11□□□□□ -0.15
CPSF1-207ENST00000531727 SIGLECL1Q8N7X8 197 aa14.11□□□□□ -0.15
CPSF1-207ENST00000531727 BHLHE23Q8NDY6 225 aa14.11□□□□□ -0.15
CPSF1-207ENST00000531727 MCUR1Q96AQ8 359 aa14.11□□□□□ -0.15
CPSF1-207ENST00000531727 CDADC1Q9BWV3 514 aa14.11□□□□□ -0.15
CPSF1-207ENST00000531727 HCAR1Q9BXC0 346 aa14.11□□□□□ -0.15
CPSF1-207ENST00000531727 WDR76Q9H967 626 aa14.11□□□□□ -0.15
CPSF1-207ENST00000531727 TMEM165Q9HC07 324 aa14.11□□□□□ -0.15
CPSF1-207ENST00000531727 ZNF69Q9UC07 566 aa14.11□□□□□ -0.15
CPSF1-207ENST00000531727 OR6C68A6NDL8 312 aa14.1□□□□□ -0.15
CPSF1-207ENST00000531727 IDH3BO43837 385 aa14.1□□□□□ -0.15
CPSF1-207ENST00000531727 SNX3O60493 162 aa14.1□□□□□ -0.15
CPSF1-207ENST00000531727 ZNF205O95201 554 aa14.1□□□□□ -0.15
CPSF1-207ENST00000531727 FSTL3O95633 263 aa14.1□□□□□ -0.15
CPSF1-207ENST00000531727 FABP3P05413 133 aa14.1□□□□□ -0.15
CPSF1-207ENST00000531727 ACSM4P0C7M7 580 aa14.1□□□□□ -0.15
CPSF1-207ENST00000531727 RPS2P15880 293 aaKnown RBP14.1□□□□□ -0.15
CPSF1-207ENST00000531727 NOS3P29474 1203 aa14.1□□□□□ -0.15
CPSF1-207ENST00000531727 RRM2P31350 389 aa14.1□□□□□ -0.15
CPSF1-207ENST00000531727 PAX2Q02962 417 aa14.1□□□□□ -0.15
CPSF1-207ENST00000531727 PAX8Q06710 450 aa14.1□□□□□ -0.15
CPSF1-207ENST00000531727 AWAT1Q58HT5 328 aa14.1□□□□□ -0.15
CPSF1-207ENST00000531727 SAMD4BQ5PRF9 694 aaKnown RBP14.1□□□□□ -0.15
CPSF1-207ENST00000531727 MOGAT3Q86VF5 341 aa14.1□□□□□ -0.15
CPSF1-207ENST00000531727 KLBQ86Z14 1044 aa14.1□□□□□ -0.15
CPSF1-207ENST00000531727 PGAM4Q8N0Y7 254 aa14.1□□□□□ -0.15
CPSF1-207ENST00000531727 SDR9C7Q8NEX9 313 aa14.1□□□□□ -0.15
CPSF1-207ENST00000531727 OR2AJ1Q8NGZ0 328 aa14.1□□□□□ -0.15
CPSF1-207ENST00000531727 NSMCE2Q96MF7 247 aa14.1□□□□□ -0.15
CPSF1-207ENST00000531727 PITX2Q99697 317 aa14.1□□□□□ -0.15
CPSF1-207ENST00000531727 ATF6BQ99941 703 aa14.1□□□□□ -0.15
CPSF1-207ENST00000531727 SSBP3Q9BWW4 388 aaPredicted RBP14.1□□□□□ -0.15
CPSF1-207ENST00000531727 FAM107BQ9H098 131 aa14.1□□□□□ -0.15
CPSF1-207ENST00000531727 FN3KQ9H479 309 aa14.1□□□□□ -0.15
CPSF1-207ENST00000531727 PNRC2Q9NPJ4 139 aaKnown RBP14.1□□□□□ -0.15
CPSF1-207ENST00000531727 TMEM100Q9NV29 134 aa14.1□□□□□ -0.15
CPSF1-207ENST00000531727 MIOXQ9UGB7 285 aa14.1□□□□□ -0.15
CPSF1-207ENST00000531727 CD300AQ9UGN4 299 aa14.1□□□□□ -0.15
CPSF1-207ENST00000531727 CYB5R1Q9UHQ9 305 aa14.1□□□□□ -0.15
CPSF1-207ENST00000531727 TMCC3Q9ULS5 477 aa14.1□□□□□ -0.15
CPSF1-207ENST00000531727 IGHV3-64DA0A0J9YX35 117 aa14.09□□□□□ -0.15
CPSF1-207ENST00000531727 LRRC30A6NM36 301 aa14.09□□□□□ -0.15
CPSF1-207ENST00000531727 F5H5K5 113 aa14.09□□□□□ -0.15
CPSF1-207ENST00000531727 ARPC2O15144 300 aa14.09□□□□□ -0.15
CPSF1-207ENST00000531727 HLA-DQA2P01906 255 aa14.09□□□□□ -0.15
CPSF1-207ENST00000531727 CD80P33681 288 aa14.09□□□□□ -0.15
CPSF1-207ENST00000531727 GGT2P36268 569 aa14.09□□□□□ -0.15
CPSF1-207ENST00000531727 TRAP1Q12931 704 aaKnown RBP14.09□□□□□ -0.15
CPSF1-207ENST00000531727 TSPAN31Q12999 210 aa14.09□□□□□ -0.15
CPSF1-207ENST00000531727 GK2Q14410 553 aaPredicted RBP14.09□□□□□ -0.15
CPSF1-207ENST00000531727 ZNF620Q6ZNG0 422 aa14.09□□□□□ -0.15
CPSF1-207ENST00000531727 C1orf87Q8N0U7 546 aa14.09□□□□□ -0.15
CPSF1-207ENST00000531727 GNPDA2Q8TDQ7 276 aa14.09□□□□□ -0.15
CPSF1-207ENST00000531727 NEIL1Q96FI4 390 aaPredicted RBP14.09□□□□□ -0.15
CPSF1-207ENST00000531727 TMEM246Q9BRR3 403 aa14.09□□□□□ -0.15
CPSF1-207ENST00000531727 NSRP1Q9H0G5 558 aaKnown RBP14.09□□□□□ -0.15
CPSF1-207ENST00000531727 ZMAT3Q9HA38 289 aaKnown RBP14.09□□□□□ -0.15
CPSF1-207ENST00000531727 IL1RAPQ9NPH3 570 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms