RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 ST7LQ8TDW4 575 aa10.82□□□□□ -0.68
CCDC90B-216ENST00000529856 SNX33Q8WV41 574 aa10.82□□□□□ -0.68
CCDC90B-216ENST00000529856 GTF3AQ92664 365 aaKnown RBP10.82□□□□□ -0.68
CCDC90B-216ENST00000529856 SPTSSAQ969W0 71 aa10.82□□□□□ -0.68
CCDC90B-216ENST00000529856 HAVCR1Q96D42 359 aa10.82□□□□□ -0.68
CCDC90B-216ENST00000529856 CMBLQ96DG6 245 aa10.82□□□□□ -0.68
CCDC90B-216ENST00000529856 SLAMF6Q96DU3 332 aa10.82□□□□□ -0.68
CCDC90B-216ENST00000529856 ZMYND19Q96E35 227 aaPredicted RBP10.82□□□□□ -0.68
CCDC90B-216ENST00000529856 RBM4BQ9BQ04 359 aaKnown RBP10.82□□□□□ -0.68
CCDC90B-216ENST00000529856 C1QTNF5Q9BXJ0 243 aa10.82□□□□□ -0.68
CCDC90B-216ENST00000529856 CYSLTR2Q9NS75 346 aa10.82□□□□□ -0.68
CCDC90B-216ENST00000529856 DDX28Q9NUL7 540 aaKnown RBP10.82□□□□□ -0.68
CCDC90B-216ENST00000529856 NKIRAS2Q9NYR9 191 aa10.82□□□□□ -0.68
CCDC90B-216ENST00000529856 A0A096LNT2 108 aa10.81□□□□□ -0.68
CCDC90B-216ENST00000529856 VWC2LB2RUY7 222 aa10.81□□□□□ -0.68
CCDC90B-216ENST00000529856 NDUFS8O00217 210 aa10.81□□□□□ -0.68
CCDC90B-216ENST00000529856 TLX2O43763 284 aaPredicted RBP10.81□□□□□ -0.68
CCDC90B-216ENST00000529856 PRKYO43930 277 aa10.81□□□□□ -0.68
CCDC90B-216ENST00000529856 HPXP02790 462 aa10.81□□□□□ -0.68
CCDC90B-216ENST00000529856 RAC2P15153 192 aa10.81□□□□□ -0.68
CCDC90B-216ENST00000529856 KITLGP21583 273 aa10.81□□□□□ -0.68
CCDC90B-216ENST00000529856 OTX1P32242 354 aaPredicted RBP10.81□□□□□ -0.68
CCDC90B-216ENST00000529856 POLR2IP36954 125 aaKnown RBP10.81□□□□□ -0.68
CCDC90B-216ENST00000529856 TPTEP56180 551 aa10.81□□□□□ -0.68
CCDC90B-216ENST00000529856 APOFQ13790 326 aa10.81□□□□□ -0.68
CCDC90B-216ENST00000529856 EIF2B1Q14232 305 aaKnown RBP10.81□□□□□ -0.68
CCDC90B-216ENST00000529856 CARTPTQ16568 116 aa10.81□□□□□ -0.68
CCDC90B-216ENST00000529856 PCGF3Q3KNV8 242 aa10.81□□□□□ -0.68
CCDC90B-216ENST00000529856 FBXW12Q6X9E4 464 aa10.81□□□□□ -0.68
CCDC90B-216ENST00000529856 SHFQ7M4L6 423 aa10.81□□□□□ -0.68
CCDC90B-216ENST00000529856 DPY19L4Q7Z388 723 aa10.81□□□□□ -0.68
CCDC90B-216ENST00000529856 MAPK1IP1LQ8NDC0 245 aa10.81□□□□□ -0.68
CCDC90B-216ENST00000529856 OR6N2Q8NGY6 317 aa10.81□□□□□ -0.68
CCDC90B-216ENST00000529856 TEAD3Q99594 435 aa10.81□□□□□ -0.68
CCDC90B-216ENST00000529856 GABARAPL3Q9BY60 117 aa10.81□□□□□ -0.68
CCDC90B-216ENST00000529856 PRRG3Q9BZD7 231 aa10.81□□□□□ -0.68
CCDC90B-216ENST00000529856 CENPMQ9NSP4 180 aa10.81□□□□□ -0.68
CCDC90B-216ENST00000529856 USE1Q9NZ43 259 aa10.81□□□□□ -0.68
CCDC90B-216ENST00000529856 PTTG3PQ9NZH4 202 aa10.81□□□□□ -0.68
CCDC90B-216ENST00000529856 PURGQ9UJV8 347 aaKnown RBP10.81□□□□□ -0.68
CCDC90B-216ENST00000529856 CR1P17927 2039 aa10.8□□□□□ -0.68
CCDC90B-216ENST00000529856 PLSCR5A0PG75 271 aa10.8□□□□□ -0.68
CCDC90B-216ENST00000529856 ZNF878C9JN71 531 aa10.8□□□□□ -0.68
CCDC90B-216ENST00000529856 LYNX1G3V0Z9 82 aa10.8□□□□□ -0.68
CCDC90B-216ENST00000529856 M0R135 149 aa10.8□□□□□ -0.68
CCDC90B-216ENST00000529856 TIMM8AO60220 97 aaPredicted RBP10.8□□□□□ -0.68
CCDC90B-216ENST00000529856 NCR1O76036 304 aa10.8□□□□□ -0.68
CCDC90B-216ENST00000529856 LY6G6DO95868 133 aa10.8□□□□□ -0.68
CCDC90B-216ENST00000529856 LCATP04180 440 aa10.8□□□□□ -0.68
CCDC90B-216ENST00000529856 ALPLP05186 524 aa10.8□□□□□ -0.68
CCDC90B-216ENST00000529856 LYNX1P0DP58 116 aa10.8□□□□□ -0.68
CCDC90B-216ENST00000529856 COL8A2P25067 703 aa10.8□□□□□ -0.68
CCDC90B-216ENST00000529856 GIFP27352 417 aa10.8□□□□□ -0.68
CCDC90B-216ENST00000529856 NR4A2P43354 598 aa10.8□□□□□ -0.68
CCDC90B-216ENST00000529856 MAGEB1P43366 347 aa10.8□□□□□ -0.68
CCDC90B-216ENST00000529856 ZNF81P51508 661 aa10.8□□□□□ -0.68
CCDC90B-216ENST00000529856 RPS7P62081 194 aaKnown RBP10.8□□□□□ -0.68
CCDC90B-216ENST00000529856 CCL8P80075 99 aa10.8□□□□□ -0.68
CCDC90B-216ENST00000529856 MRPS11P82912 194 aaKnown RBP10.8□□□□□ -0.68
CCDC90B-216ENST00000529856 LOXL1Q08397 574 aaPredicted RBP10.8□□□□□ -0.68
CCDC90B-216ENST00000529856 HLXQ14774 488 aaPredicted RBP10.8□□□□□ -0.68
CCDC90B-216ENST00000529856 TAF13Q15543 124 aa10.8□□□□□ -0.68
CCDC90B-216ENST00000529856 DRAM2Q6UX65 266 aa10.8□□□□□ -0.68
CCDC90B-216ENST00000529856 CLEC9AQ6UXN8 241 aa10.8□□□□□ -0.68
CCDC90B-216ENST00000529856 RHOUQ7L0Q8 258 aa10.8□□□□□ -0.68
CCDC90B-216ENST00000529856 TCEANCQ8N8B7 351 aa10.8□□□□□ -0.68
CCDC90B-216ENST00000529856 ZNF540Q8NDQ6 660 aa10.8□□□□□ -0.68
CCDC90B-216ENST00000529856 RDH5Q92781 318 aa10.8□□□□□ -0.68
CCDC90B-216ENST00000529856 ZNF799Q96GE5 643 aa10.8□□□□□ -0.68
CCDC90B-216ENST00000529856 KCNJ15Q99712 375 aa10.8□□□□□ -0.68
CCDC90B-216ENST00000529856 PIMREGQ9BSJ6 248 aa10.8□□□□□ -0.68
CCDC90B-216ENST00000529856 COPS4Q9BT78 406 aa10.8□□□□□ -0.68
CCDC90B-216ENST00000529856 ABHD6Q9BV23 337 aa10.8□□□□□ -0.68
CCDC90B-216ENST00000529856 RIBC2Q9H4K1 309 aa10.8□□□□□ -0.68
CCDC90B-216ENST00000529856 CGGBP1Q9UFW8 167 aaPredicted RBP10.8□□□□□ -0.68
CCDC90B-216ENST00000529856 ZDHHC8Q9ULC8 765 aa10.8□□□□□ -0.68
CCDC90B-216ENST00000529856 CCDC182A6NF36 153 aa10.79□□□□□ -0.68
CCDC90B-216ENST00000529856 ZSCAN5BA6NJL1 495 aa10.79□□□□□ -0.68
CCDC90B-216ENST00000529856 EI24O14681 340 aa10.79□□□□□ -0.68
CCDC90B-216ENST00000529856 SPRY3O43610 288 aa10.79□□□□□ -0.68
CCDC90B-216ENST00000529856 SELENOFO60613 162 aa10.79□□□□□ -0.68
CCDC90B-216ENST00000529856 IGHV1-46P01743 117 aa10.79□□□□□ -0.68
CCDC90B-216ENST00000529856 ADH4P08319 380 aa10.79□□□□□ -0.68
CCDC90B-216ENST00000529856 SLC15A1P46059 708 aa10.79□□□□□ -0.68
CCDC90B-216ENST00000529856 ALDH3A2P51648 485 aa10.79□□□□□ -0.68
CCDC90B-216ENST00000529856 GRB2P62993 217 aaKnown RBP10.79□□□□□ -0.68
CCDC90B-216ENST00000529856 CDK5R2Q13319 367 aa10.79□□□□□ -0.68
CCDC90B-216ENST00000529856 RIN1Q13671 783 aa10.79□□□□□ -0.68
CCDC90B-216ENST00000529856 TSTQ16762 297 aaKnown RBP10.79□□□□□ -0.68
CCDC90B-216ENST00000529856 AADACL4Q5VUY2 407 aa10.79□□□□□ -0.68
CCDC90B-216ENST00000529856 SPATC1Q76KD6 591 aa10.79□□□□□ -0.68
CCDC90B-216ENST00000529856 MEPCEQ7L2J0 689 aaKnown RBP10.79□□□□□ -0.68
CCDC90B-216ENST00000529856 PQLC1Q8N2U9 271 aa10.79□□□□□ -0.68
CCDC90B-216ENST00000529856 CBR4Q8N4T8 237 aa10.79□□□□□ -0.68
CCDC90B-216ENST00000529856 ZNF454Q8N9F8 522 aa10.79□□□□□ -0.68
CCDC90B-216ENST00000529856 OTOSQ8NHW6 89 aa10.79□□□□□ -0.68
CCDC90B-216ENST00000529856 TMEM163Q8TC26 289 aa10.79□□□□□ -0.68
CCDC90B-216ENST00000529856 RNF133Q8WVZ7 376 aa10.79□□□□□ -0.68
CCDC90B-216ENST00000529856 AMELYQ99218 206 aa10.79□□□□□ -0.68
CCDC90B-216ENST00000529856 TOR3AQ9H497 397 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms