RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 MRPS25P82663 173 aaKnown RBP3.8□□□□□ -1.8
CSDE1-212ENST00000529046 CKAP4Q07065 602 aaKnown RBP3.8□□□□□ -1.8
CSDE1-212ENST00000529046 C2orf54Q08AI8 447 aa3.8□□□□□ -1.8
CSDE1-212ENST00000529046 ZNF763Q0D2J5 394 aa3.8□□□□□ -1.8
CSDE1-212ENST00000529046 LCP2Q13094 533 aa3.8□□□□□ -1.8
CSDE1-212ENST00000529046 EXOSC7Q15024 291 aaKnown RBP3.8□□□□□ -1.8
CSDE1-212ENST00000529046 KIAA0040Q15053 153 aa3.8□□□□□ -1.8
CSDE1-212ENST00000529046 WHAMMP3Q1A5X7 153 aa3.8□□□□□ -1.8
CSDE1-212ENST00000529046 ANKDD1AQ495B1 522 aa3.8□□□□□ -1.8
CSDE1-212ENST00000529046 VPS26BQ4G0F5 336 aa3.8□□□□□ -1.8
CSDE1-212ENST00000529046 UNC50Q53HI1 259 aa3.8□□□□□ -1.8
CSDE1-212ENST00000529046 AP1ARQ63HQ0 302 aa3.8□□□□□ -1.8
CSDE1-212ENST00000529046 FAM71E1Q6IPT2 247 aa3.8□□□□□ -1.8
CSDE1-212ENST00000529046 C8orf74Q6P047 294 aa3.8□□□□□ -1.8
CSDE1-212ENST00000529046 NPSR1Q6W5P4 371 aa3.8□□□□□ -1.8
CSDE1-212ENST00000529046 LUZP2Q86TE4 346 aa3.8□□□□□ -1.8
CSDE1-212ENST00000529046 GRAMD2AQ8IUY3 354 aa3.8□□□□□ -1.8
CSDE1-212ENST00000529046 MISPQ8IVT2 679 aa3.8□□□□□ -1.8
CSDE1-212ENST00000529046 PEX5LQ8IYB4 626 aa3.8□□□□□ -1.8
CSDE1-212ENST00000529046 PRR22Q8IZ63 422 aa3.8□□□□□ -1.8
CSDE1-212ENST00000529046 FAM9CQ8IZT9 166 aa3.8□□□□□ -1.8
CSDE1-212ENST00000529046 EIF1ADQ8N9N8 165 aaKnown RBP3.8□□□□□ -1.8
CSDE1-212ENST00000529046 Q8NBF4 154 aa3.8□□□□□ -1.8
CSDE1-212ENST00000529046 ZNF540Q8NDQ6 660 aa3.8□□□□□ -1.8
CSDE1-212ENST00000529046 OR2M3Q8NG83 312 aa3.8□□□□□ -1.8
CSDE1-212ENST00000529046 FAM110BQ8TC76 370 aa3.8□□□□□ -1.8
CSDE1-212ENST00000529046 DOK4Q8TEW6 326 aa3.8□□□□□ -1.8
CSDE1-212ENST00000529046 C16orf78Q8WTQ4 265 aa3.8□□□□□ -1.8
CSDE1-212ENST00000529046 DCAKDQ8WVC6 231 aa3.8□□□□□ -1.8
CSDE1-212ENST00000529046 TMBIM1Q969X1 311 aa3.8□□□□□ -1.8
CSDE1-212ENST00000529046 WFIKKN1Q96NZ8 548 aa3.8□□□□□ -1.8
CSDE1-212ENST00000529046 FMO2Q99518 471 aa3.8□□□□□ -1.8
CSDE1-212ENST00000529046 ACPTQ9BZG2 426 aa3.8□□□□□ -1.8
CSDE1-212ENST00000529046 CDC42EP4Q9H3Q1 356 aaKnown RBP3.8□□□□□ -1.8
CSDE1-212ENST00000529046 FOLH1BQ9HBA9 442 aa3.8□□□□□ -1.8
CSDE1-212ENST00000529046 C3orf14Q9HBI5 128 aa3.8□□□□□ -1.8
CSDE1-212ENST00000529046 FAM120CQ9NX05 1096 aaKnown RBP3.8□□□□□ -1.8
CSDE1-212ENST00000529046 DCDC2Q9UHG0 476 aa3.8□□□□□ -1.8
CSDE1-212ENST00000529046 PYCARDQ9ULZ3 195 aa3.8□□□□□ -1.8
CSDE1-212ENST00000529046 ZNF337Q9Y3M9 751 aa3.8□□□□□ -1.8
CSDE1-212ENST00000529046 SMAD5-AS1Q9Y6J3 95 aa3.8□□□□□ -1.8
CSDE1-212ENST00000529046 NINQ8N4C6 2090 aa3.8□□□□□ -1.8
CSDE1-212ENST00000529046 NCKAP5O14513 1909 aa3.8□□□□□ -1.8
CSDE1-212ENST00000529046 ABCA4P78363 2273 aa3.79□□□□□ -1.8
CSDE1-212ENST00000529046 GNG14A0A1W2PPG7 69 aa3.79□□□□□ -1.8
CSDE1-212ENST00000529046 TRIM49D1C9J1S8 452 aa3.79□□□□□ -1.8
CSDE1-212ENST00000529046 TNFSF12O43508 249 aa3.79□□□□□ -1.8
CSDE1-212ENST00000529046 SS18L1O75177 396 aaPredicted RBP3.79□□□□□ -1.8
CSDE1-212ENST00000529046 CLN5O75503 358 aa3.79□□□□□ -1.8
CSDE1-212ENST00000529046 MTRF1O75570 445 aaKnown RBP3.79□□□□□ -1.8
CSDE1-212ENST00000529046 ANXA4P09525 319 aaPredicted RBP3.79□□□□□ -1.8
CSDE1-212ENST00000529046 PABPC4LP0CB38 370 aaKnown RBP3.79□□□□□ -1.8
CSDE1-212ENST00000529046 POU2F1P14859 743 aa3.79□□□□□ -1.8
CSDE1-212ENST00000529046 TBXA2RP21731 343 aa3.79□□□□□ -1.8
CSDE1-212ENST00000529046 GCAP28676 217 aa3.79□□□□□ -1.8
CSDE1-212ENST00000529046 HMOX2P30519 316 aa3.79□□□□□ -1.8
CSDE1-212ENST00000529046 EVI2BP34910 448 aa3.79□□□□□ -1.8
CSDE1-212ENST00000529046 EIF1P41567 113 aaKnown RBP3.79□□□□□ -1.8
CSDE1-212ENST00000529046 STARP49675 285 aa3.79□□□□□ -1.8
CSDE1-212ENST00000529046 SUCLG1P53597 346 aaKnown RBP3.79□□□□□ -1.8
CSDE1-212ENST00000529046 DNAJB13P59910 316 aa3.79□□□□□ -1.8
CSDE1-212ENST00000529046 SRYQ05066 204 aa3.79□□□□□ -1.8
CSDE1-212ENST00000529046 ZNHIT3Q15649 155 aaPredicted RBP3.79□□□□□ -1.8
CSDE1-212ENST00000529046 LTB4RQ15722 352 aa3.79□□□□□ -1.8
CSDE1-212ENST00000529046 UAP1Q16222 522 aaPredicted RBP3.79□□□□□ -1.8
CSDE1-212ENST00000529046 SNAI3Q3KNW1 292 aa3.79□□□□□ -1.8
CSDE1-212ENST00000529046 CCDC153Q494R4 210 aa3.79□□□□□ -1.8
CSDE1-212ENST00000529046 BEX5Q5H9J7 111 aa3.79□□□□□ -1.8
CSDE1-212ENST00000529046 CPTPQ5TA50 214 aa3.79□□□□□ -1.8
CSDE1-212ENST00000529046 SLC27A4Q6P1M0 643 aa3.79□□□□□ -1.8
CSDE1-212ENST00000529046 SYT10Q6XYQ8 523 aa3.79□□□□□ -1.8
CSDE1-212ENST00000529046 GPRIN3Q6ZVF9 776 aa3.79□□□□□ -1.8
CSDE1-212ENST00000529046 Q6ZVQ6 151 aa3.79□□□□□ -1.8
CSDE1-212ENST00000529046 TRMT10CQ7L0Y3 403 aaKnown RBP3.79□□□□□ -1.8
CSDE1-212ENST00000529046 MTERF4Q7Z6M4 381 aaKnown RBP3.79□□□□□ -1.8
CSDE1-212ENST00000529046 CROCCP3Q8IVE0 287 aa3.79□□□□□ -1.8
CSDE1-212ENST00000529046 AQP12AQ8IXF9 295 aa3.79□□□□□ -1.8
CSDE1-212ENST00000529046 GCNT2Q8N0V5 402 aa3.79□□□□□ -1.8
CSDE1-212ENST00000529046 GTPBP8Q8N3Z3 284 aaPredicted RBP3.79□□□□□ -1.8
CSDE1-212ENST00000529046 NATD1Q8N6N6 113 aa3.79□□□□□ -1.8
CSDE1-212ENST00000529046 CDRT4Q8N9R6 151 aa3.79□□□□□ -1.8
CSDE1-212ENST00000529046 AQP11Q8NBQ7 271 aa3.79□□□□□ -1.8
CSDE1-212ENST00000529046 OR7G2Q8NG99 324 aa3.79□□□□□ -1.8
CSDE1-212ENST00000529046 OR4K17Q8NGC6 315 aa3.79□□□□□ -1.8
CSDE1-212ENST00000529046 OR9A2Q8NGT5 310 aa3.79□□□□□ -1.8
CSDE1-212ENST00000529046 OR6K3Q8NGY3 331 aa3.79□□□□□ -1.8
CSDE1-212ENST00000529046 FCRL1Q96LA6 429 aa3.79□□□□□ -1.8
CSDE1-212ENST00000529046 AMDHD1Q96NU7 426 aa3.79□□□□□ -1.8
CSDE1-212ENST00000529046 MED18Q9BUE0 208 aa3.79□□□□□ -1.8
CSDE1-212ENST00000529046 DSN1Q9H410 356 aa3.79□□□□□ -1.8
CSDE1-212ENST00000529046 B3GAT2Q9NPZ5 323 aa3.79□□□□□ -1.8
CSDE1-212ENST00000529046 RRAGDQ9NQL2 400 aaPredicted RBP3.79□□□□□ -1.8
CSDE1-212ENST00000529046 TMEM216Q9P0N5 145 aa3.79□□□□□ -1.8
CSDE1-212ENST00000529046 DKKL1Q9UK85 242 aa3.79□□□□□ -1.8
CSDE1-212ENST00000529046 TMED5Q9Y3A6 229 aa3.79□□□□□ -1.8
CSDE1-212ENST00000529046 OR10H1Q9Y4A9 318 aa3.79□□□□□ -1.8
CSDE1-212ENST00000529046 NSD1Q96L73 2696 aaPredicted RBP3.78□□□□□ -1.8
CSDE1-212ENST00000529046 EXPH5Q8NEV8 1989 aa3.78□□□□□ -1.8
CSDE1-212ENST00000529046 DNHD1Q96M86 4753 aa3.78□□□□□ -1.8
CSDE1-212ENST00000529046 ACANP16112 2415 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 216.1 ms