RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 RBBP9O75884 186 aa13.05□□□□□ -0.32
ECHDC1-220ENST00000528402 ADRB1P08588 477 aa13.05□□□□□ -0.32
ECHDC1-220ENST00000528402 CST2P09228 141 aa13.05□□□□□ -0.32
ECHDC1-220ENST00000528402 GABRA1P14867 456 aa13.05□□□□□ -0.32
ECHDC1-220ENST00000528402 ZNF20P17024 532 aa13.05□□□□□ -0.32
ECHDC1-220ENST00000528402 HYAL4Q2M3T9 481 aa13.05□□□□□ -0.32
ECHDC1-220ENST00000528402 TBRG1Q3YBR2 411 aa13.05□□□□□ -0.32
ECHDC1-220ENST00000528402 NRN1LQ496H8 165 aa13.05□□□□□ -0.32
ECHDC1-220ENST00000528402 GLYATL3Q5SZD4 288 aa13.05□□□□□ -0.32
ECHDC1-220ENST00000528402 ASPHD2Q6ICH7 369 aa13.05□□□□□ -0.32
ECHDC1-220ENST00000528402 RAB12Q6IQ22 244 aa13.05□□□□□ -0.32
ECHDC1-220ENST00000528402 ZNF529Q6P280 563 aa13.05□□□□□ -0.32
ECHDC1-220ENST00000528402 ZNF813Q6ZN06 617 aa13.05□□□□□ -0.32
ECHDC1-220ENST00000528402 AAED1Q7RTV5 226 aa13.05□□□□□ -0.32
ECHDC1-220ENST00000528402 PRSS45Q7RTY3 260 aa13.05□□□□□ -0.32
ECHDC1-220ENST00000528402 SLC22A24Q8N4F4 322 aa13.05□□□□□ -0.32
ECHDC1-220ENST00000528402 ZNF283Q8N7M2 679 aa13.05□□□□□ -0.32
ECHDC1-220ENST00000528402 OR1M1Q8NGA1 313 aa13.05□□□□□ -0.32
ECHDC1-220ENST00000528402 OR52I2Q8NH67 350 aa13.05□□□□□ -0.32
ECHDC1-220ENST00000528402 OR56B4Q8NH76 319 aa13.05□□□□□ -0.32
ECHDC1-220ENST00000528402 OR10D3Q8NH80 312 aa13.05□□□□□ -0.32
ECHDC1-220ENST00000528402 UBASH3BQ8TF42 649 aa13.05□□□□□ -0.32
ECHDC1-220ENST00000528402 TMEM45BQ96B21 275 aa13.05□□□□□ -0.32
ECHDC1-220ENST00000528402 UPRTQ96BW1 309 aa13.05□□□□□ -0.32
ECHDC1-220ENST00000528402 FGGYQ96C11 551 aa13.05□□□□□ -0.32
ECHDC1-220ENST00000528402 ST6GAL2Q96JF0 529 aa13.05□□□□□ -0.32
ECHDC1-220ENST00000528402 TRAF4Q9BUZ4 470 aaPredicted RBP13.05□□□□□ -0.32
ECHDC1-220ENST00000528402 SLCO5A1Q9H2Y9 848 aa13.05□□□□□ -0.32
ECHDC1-220ENST00000528402 RAB22AQ9UL26 194 aa13.05□□□□□ -0.32
ECHDC1-220ENST00000528402 PAIP2BQ9ULR5 123 aaKnown RBP13.05□□□□□ -0.32
ECHDC1-220ENST00000528402 PCSK5Q92824 1860 aa13.04□□□□□ -0.32
ECHDC1-220ENST00000528402 IGHV3-15A0A0B4J1V0 119 aa13.04□□□□□ -0.32
ECHDC1-220ENST00000528402 A0A0U1RQV5 110 aa13.04□□□□□ -0.32
ECHDC1-220ENST00000528402 A0A1B0GTI1 187 aa13.04□□□□□ -0.32
ECHDC1-220ENST00000528402 ANKRD20A5PA0PJZ0 165 aa13.04□□□□□ -0.32
ECHDC1-220ENST00000528402 METTL21EPA6NDL7 271 aa13.04□□□□□ -0.32
ECHDC1-220ENST00000528402 H0YC42 278 aa13.04□□□□□ -0.32
ECHDC1-220ENST00000528402 RER1O15258 196 aa13.04□□□□□ -0.32
ECHDC1-220ENST00000528402 CXCL13O43927 109 aa13.04□□□□□ -0.32
ECHDC1-220ENST00000528402 ALDOBP05062 364 aa13.04□□□□□ -0.32
ECHDC1-220ENST00000528402 CSF1P09603 554 aa13.04□□□□□ -0.32
ECHDC1-220ENST00000528402 KLK2P20151 261 aa13.04□□□□□ -0.32
ECHDC1-220ENST00000528402 BTCP35070 178 aa13.04□□□□□ -0.32
ECHDC1-220ENST00000528402 GNALP38405 381 aa13.04□□□□□ -0.32
ECHDC1-220ENST00000528402 CX3CR1P49238 355 aa13.04□□□□□ -0.32
ECHDC1-220ENST00000528402 SRP9P49458 86 aaKnown RBP13.04□□□□□ -0.32
ECHDC1-220ENST00000528402 ZNF121P58317 390 aaPredicted RBP13.04□□□□□ -0.32
ECHDC1-220ENST00000528402 ENDOGQ14249 297 aaKnown RBP13.04□□□□□ -0.32
ECHDC1-220ENST00000528402 OLFML2AQ68BL7 652 aa13.04□□□□□ -0.32
ECHDC1-220ENST00000528402 SLC25A25Q6KCM7 469 aa13.04□□□□□ -0.32
ECHDC1-220ENST00000528402 IGF2-ASQ6U949 168 aa13.04□□□□□ -0.32
ECHDC1-220ENST00000528402 ADGRE4PQ86SQ3 457 aa13.04□□□□□ -0.32
ECHDC1-220ENST00000528402 DTX1Q86Y01 620 aa13.04□□□□□ -0.32
ECHDC1-220ENST00000528402 LYPD6Q86Y78 171 aa13.04□□□□□ -0.32
ECHDC1-220ENST00000528402 SULF2Q8IWU5 870 aa13.04□□□□□ -0.32
ECHDC1-220ENST00000528402 IZUMO1Q8IYV9 350 aa13.04□□□□□ -0.32
ECHDC1-220ENST00000528402 GPR137CQ8N3F9 429 aa13.04□□□□□ -0.32
ECHDC1-220ENST00000528402 MEIOBQ8N635 442 aa13.04□□□□□ -0.32
ECHDC1-220ENST00000528402 PLPP7Q8NBV4 271 aa13.04□□□□□ -0.32
ECHDC1-220ENST00000528402 AKAP1Q92667 903 aaKnown RBP eCLIP13.04□□□□□ -0.32
ECHDC1-220ENST00000528402 SPTSSAQ969W0 71 aa13.04□□□□□ -0.32
ECHDC1-220ENST00000528402 NABP1Q96AH0 204 aa13.04□□□□□ -0.32
ECHDC1-220ENST00000528402 PRRX2Q99811 253 aa13.04□□□□□ -0.32
ECHDC1-220ENST00000528402 METTL17Q9H7H0 456 aaPredicted RBP13.04□□□□□ -0.32
ECHDC1-220ENST00000528402 ZNF703Q9H7S9 590 aaPredicted RBP13.04□□□□□ -0.32
ECHDC1-220ENST00000528402 SCPEP1Q9HB40 452 aa13.04□□□□□ -0.32
ECHDC1-220ENST00000528402 PARPBPQ9NWS1 579 aa13.04□□□□□ -0.32
ECHDC1-220ENST00000528402 ING3Q9NXR8 418 aa13.04□□□□□ -0.32
ECHDC1-220ENST00000528402 FBLN5Q9UBX5 448 aa13.04□□□□□ -0.32
ECHDC1-220ENST00000528402 ZNF107Q9UII5 783 aaPredicted RBP13.04□□□□□ -0.32
ECHDC1-220ENST00000528402 ALG5Q9Y673 324 aa13.04□□□□□ -0.32
ECHDC1-220ENST00000528402 MRPS18BQ9Y676 258 aaKnown RBP13.04□□□□□ -0.32
ECHDC1-220ENST00000528402 PHF3Q92576 2039 aaKnown RBP13.03□□□□□ -0.32
ECHDC1-220ENST00000528402 USP34Q70CQ2 3546 aa13.03□□□□□ -0.32
ECHDC1-220ENST00000528402 IGKV3D-15A0A087WSY6 115 aa13.03□□□□□ -0.32
ECHDC1-220ENST00000528402 TMEM272A0A1B0GTI8 110 aa13.03□□□□□ -0.32
ECHDC1-220ENST00000528402 PRR33A8MZF0 331 aa13.03□□□□□ -0.32
ECHDC1-220ENST00000528402 H7C417 338 aa13.03□□□□□ -0.32
ECHDC1-220ENST00000528402 LDLRAD4O15165 306 aa13.03□□□□□ -0.32
ECHDC1-220ENST00000528402 PRAF2O60831 178 aa13.03□□□□□ -0.32
ECHDC1-220ENST00000528402 ALX3O95076 343 aa13.03□□□□□ -0.32
ECHDC1-220ENST00000528402 BPNT1O95861 308 aa13.03□□□□□ -0.32
ECHDC1-220ENST00000528402 CD46P15529 392 aa13.03□□□□□ -0.32
ECHDC1-220ENST00000528402 GIFP27352 417 aa13.03□□□□□ -0.32
ECHDC1-220ENST00000528402 PRSS3P35030 304 aa13.03□□□□□ -0.32
ECHDC1-220ENST00000528402 GSK3AP49840 483 aa13.03□□□□□ -0.32
ECHDC1-220ENST00000528402 SELENOPP49908 381 aa13.03□□□□□ -0.32
ECHDC1-220ENST00000528402 PRKXP51817 358 aa13.03□□□□□ -0.32
ECHDC1-220ENST00000528402 PCBD1P61457 104 aa13.03□□□□□ -0.32
ECHDC1-220ENST00000528402 RRAS2P62070 204 aaPredicted RBP13.03□□□□□ -0.32
ECHDC1-220ENST00000528402 CBX3Q13185 183 aa13.03□□□□□ -0.32
ECHDC1-220ENST00000528402 PHYHD1Q5SRE7 291 aa13.03□□□□□ -0.32
ECHDC1-220ENST00000528402 ATAD3CQ5T2N8 411 aa13.03□□□□□ -0.32
ECHDC1-220ENST00000528402 STPG1Q5TH74 334 aa13.03□□□□□ -0.32
ECHDC1-220ENST00000528402 TCTE3Q8IZS6 198 aa13.03□□□□□ -0.32
ECHDC1-220ENST00000528402 JAGN1Q8N5M9 183 aa13.03□□□□□ -0.32
ECHDC1-220ENST00000528402 NUDT16L1Q9BRJ7 211 aaKnown RBP13.03□□□□□ -0.32
ECHDC1-220ENST00000528402 RNF122Q9H9V4 155 aa13.03□□□□□ -0.32
ECHDC1-220ENST00000528402 NEK6Q9HC98 313 aa13.03□□□□□ -0.32
ECHDC1-220ENST00000528402 HRASLSQ9HDD0 168 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms