RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 C5AR1P21730 350 aa13.13□□□□□ -0.31
CAPN1-214ENST00000528165 PDGFRLQ15198 375 aa13.13□□□□□ -0.31
CAPN1-214ENST00000528165 SLC9A3R2Q15599 337 aa13.13□□□□□ -0.31
CAPN1-214ENST00000528165 HMGN3Q15651 99 aa13.13□□□□□ -0.31
CAPN1-214ENST00000528165 CD226Q15762 336 aa13.13□□□□□ -0.31
CAPN1-214ENST00000528165 KRBOX4Q5JUW0 171 aa13.13□□□□□ -0.31
CAPN1-214ENST00000528165 CBLN3Q6UW01 205 aa13.13□□□□□ -0.31
CAPN1-214ENST00000528165 HOGA1Q86XE5 327 aa13.13□□□□□ -0.31
CAPN1-214ENST00000528165 EDARADDQ8WWZ3 215 aa13.13□□□□□ -0.31
CAPN1-214ENST00000528165 METTL21AQ8WXB1 218 aa13.13□□□□□ -0.31
CAPN1-214ENST00000528165 TAAR8Q969N4 342 aa13.13□□□□□ -0.31
CAPN1-214ENST00000528165 CCDC3Q9BQI4 270 aa13.13□□□□□ -0.31
CAPN1-214ENST00000528165 SLC5A7Q9GZV3 580 aa13.13□□□□□ -0.31
CAPN1-214ENST00000528165 PDE7BQ9NP56 450 aa13.13□□□□□ -0.31
CAPN1-214ENST00000528165 POMT1Q9Y6A1 747 aa13.13□□□□□ -0.31
CAPN1-214ENST00000528165 LOC390937A0A1W2PQ73 354 aa13.12□□□□□ -0.31
CAPN1-214ENST00000528165 ADH1BP00325 375 aa13.12□□□□□ -0.31
CAPN1-214ENST00000528165 PLGP00747 810 aaPredicted RBP13.12□□□□□ -0.31
CAPN1-214ENST00000528165 PET100P0DJ07 73 aa13.12□□□□□ -0.31
CAPN1-214ENST00000528165 LYL1P12980 280 aa13.12□□□□□ -0.31
CAPN1-214ENST00000528165 GNB3P16520 340 aa13.12□□□□□ -0.31
CAPN1-214ENST00000528165 ACTR1BP42025 376 aa13.12□□□□□ -0.31
CAPN1-214ENST00000528165 ACTR1AP61163 376 aa13.12□□□□□ -0.31
CAPN1-214ENST00000528165 RPL7L1Q6DKI1 246 aaKnown RBP13.12□□□□□ -0.31
CAPN1-214ENST00000528165 DTWD2Q8NBA8 298 aa13.12□□□□□ -0.31
CAPN1-214ENST00000528165 OR9A4Q8NGU2 314 aa13.12□□□□□ -0.31
CAPN1-214ENST00000528165 OR4K15Q8NH41 348 aa13.12□□□□□ -0.31
CAPN1-214ENST00000528165 OR14C36Q8NHC7 312 aa13.12□□□□□ -0.31
CAPN1-214ENST00000528165 ABHD6Q9BV23 337 aa13.12□□□□□ -0.31
CAPN1-214ENST00000528165 EMC9Q9Y3B6 208 aa13.12□□□□□ -0.31
CAPN1-214ENST00000528165 TIMM10BQ9Y5J6 103 aa13.12□□□□□ -0.31
CAPN1-214ENST00000528165 TBC1D3DA0A087WVF3 549 aa13.12□□□□□ -0.31
CAPN1-214ENST00000528165 LOC107986453A0A1B0GWG9 222 aa13.12□□□□□ -0.31
CAPN1-214ENST00000528165 TBC1D3LB9A6J9 549 aa13.12□□□□□ -0.31
CAPN1-214ENST00000528165 WRBO00258 174 aa13.12□□□□□ -0.31
CAPN1-214ENST00000528165 SLC31A1O15431 190 aa13.12□□□□□ -0.31
CAPN1-214ENST00000528165 TIMP1P01033 207 aa13.12□□□□□ -0.31
CAPN1-214ENST00000528165 CSTBP04080 98 aaKnown RBP13.12□□□□□ -0.31
CAPN1-214ENST00000528165 TBC1D3HP0C7X1 549 aa13.12□□□□□ -0.31
CAPN1-214ENST00000528165 HGFACQ04756 655 aa13.12□□□□□ -0.31
CAPN1-214ENST00000528165 EBPQ15125 230 aaKnown RBP13.12□□□□□ -0.31
CAPN1-214ENST00000528165 TBC1D3CQ6IPX1 549 aa13.12□□□□□ -0.31
CAPN1-214ENST00000528165 BTNL8Q6UX41 500 aa13.12□□□□□ -0.31
CAPN1-214ENST00000528165 TBC1D3Q8IZP1 549 aaPredicted RBP13.12□□□□□ -0.31
CAPN1-214ENST00000528165 C16orf52Q8NHV5 167 aa13.12□□□□□ -0.31
CAPN1-214ENST00000528165 CCL4L1Q8NHW4 92 aa13.12□□□□□ -0.31
CAPN1-214ENST00000528165 C8orf44Q96CB5 159 aa13.12□□□□□ -0.31
CAPN1-214ENST00000528165 METTL8Q9H825 291 aaKnown RBP13.12□□□□□ -0.31
CAPN1-214ENST00000528165 MRPL22Q9NWU5 206 aaKnown RBP13.12□□□□□ -0.31
CAPN1-214ENST00000528165 A6NLC8 198 aa13.12□□□□□ -0.31
CAPN1-214ENST00000528165 CLN5O75503 358 aa13.12□□□□□ -0.31
CAPN1-214ENST00000528165 SNRNP70P08621 437 aaKnown RBP13.12□□□□□ -0.31
CAPN1-214ENST00000528165 ADH6P28332 368 aa13.12□□□□□ -0.31
CAPN1-214ENST00000528165 CD1CP29017 333 aa13.12□□□□□ -0.31
CAPN1-214ENST00000528165 GLP1RP43220 463 aa13.12□□□□□ -0.31
CAPN1-214ENST00000528165 SULT1A2P50226 295 aa13.12□□□□□ -0.31
CAPN1-214ENST00000528165 ACER2Q5QJU3 275 aa13.12□□□□□ -0.31
CAPN1-214ENST00000528165 OR51F2Q8NH61 342 aa13.12□□□□□ -0.31
CAPN1-214ENST00000528165 TERB2Q8NHR7 220 aa13.12□□□□□ -0.31
CAPN1-214ENST00000528165 BAHD1Q8TBE0 780 aaPredicted RBP13.12□□□□□ -0.31
CAPN1-214ENST00000528165 SECTM1Q8WVN6 248 aa13.12□□□□□ -0.31
CAPN1-214ENST00000528165 SCARF2Q96GP6 870 aaPredicted RBP13.12□□□□□ -0.31
CAPN1-214ENST00000528165 OR5B2Q96R09 309 aa13.12□□□□□ -0.31
CAPN1-214ENST00000528165 CNTD2Q9H8S5 307 aa13.12□□□□□ -0.31
CAPN1-214ENST00000528165 KIF26BQ2KJY2 2108 aa13.11□□□□□ -0.31
CAPN1-214ENST00000528165 PRSS37A4D1T9 235 aa13.11□□□□□ -0.31
CAPN1-214ENST00000528165 FAM157AC9JC47 383 aa13.11□□□□□ -0.31
CAPN1-214ENST00000528165 TAAR5O14804 337 aa13.11□□□□□ -0.31
CAPN1-214ENST00000528165 NQO2P16083 231 aa13.11□□□□□ -0.31
CAPN1-214ENST00000528165 EIF2S3P41091 472 aaKnown RBP13.11□□□□□ -0.31
CAPN1-214ENST00000528165 CSNK1EP49674 416 aaKnown RBP13.11□□□□□ -0.31
CAPN1-214ENST00000528165 S100A10P60903 97 aa13.11□□□□□ -0.31
CAPN1-214ENST00000528165 SKP2Q13309 424 aa13.11□□□□□ -0.31
CAPN1-214ENST00000528165 RAB32Q13637 225 aa13.11□□□□□ -0.31
CAPN1-214ENST00000528165 TGIF1Q15583 401 aa13.11□□□□□ -0.31
CAPN1-214ENST00000528165 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.11□□□□□ -0.31
CAPN1-214ENST00000528165 AWAT1Q58HT5 328 aa13.11□□□□□ -0.31
CAPN1-214ENST00000528165 CLEC18BQ6UXF7 455 aa13.11□□□□□ -0.31
CAPN1-214ENST00000528165 MARCH3Q86UD3 253 aa13.11□□□□□ -0.31
CAPN1-214ENST00000528165 ISOC2Q96AB3 205 aa13.11□□□□□ -0.31
CAPN1-214ENST00000528165 PARP11Q9NR21 331 aa13.11□□□□□ -0.31
CAPN1-214ENST00000528165 DNAJB11Q9UBS4 358 aa13.11□□□□□ -0.31
CAPN1-214ENST00000528165 PRKNO60260 465 aaPredicted RBP13.11□□□□□ -0.31
CAPN1-214ENST00000528165 SFT2D2O95562 160 aa13.11□□□□□ -0.31
CAPN1-214ENST00000528165 FBP1P09467 338 aa13.11□□□□□ -0.31
CAPN1-214ENST00000528165 HNRNPA1P09651 372 aaKnown RBP eCLIP13.11□□□□□ -0.31
CAPN1-214ENST00000528165 PRF1P14222 555 aa13.11□□□□□ -0.31
CAPN1-214ENST00000528165 GDI1P31150 447 aa13.11□□□□□ -0.31
CAPN1-214ENST00000528165 POMZP3Q6PJE2 187 aa13.11□□□□□ -0.31
CAPN1-214ENST00000528165 RTL10Q7L3V2 364 aa13.11□□□□□ -0.31
CAPN1-214ENST00000528165 TMEM41AQ96HV5 264 aa13.11□□□□□ -0.31
CAPN1-214ENST00000528165 DGAT2Q96PD7 388 aa13.11□□□□□ -0.31
CAPN1-214ENST00000528165 RSRP1Q9BUV0 290 aa13.11□□□□□ -0.31
CAPN1-214ENST00000528165 RGCCQ9H4X1 137 aa13.11□□□□□ -0.31
CAPN1-214ENST00000528165 PRR13Q9NZ81 148 aa13.11□□□□□ -0.31
CAPN1-214ENST00000528165 FLVCR1Q9Y5Y0 555 aa13.11□□□□□ -0.31
CAPN1-214ENST00000528165 R4GMQ9 66 aa13.11□□□□□ -0.31
CAPN1-214ENST00000528165 A0A0A6YYC8 382 aaPredicted RBP13.1□□□□□ -0.31
CAPN1-214ENST00000528165 C7orf77A4D0Y5 90 aa13.1□□□□□ -0.31
CAPN1-214ENST00000528165 TGFBR3LH3BV60 316 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms