RNA–Protein interactions for RNA: ENST00000527889.5

CD44-226, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-226ENST00000527889 PLPPR5Q32ZL2 321 aa3.7□□□□□ -1.82
CD44-226ENST00000527889 PCGF3Q3KNV8 242 aa3.7□□□□□ -1.82
CD44-226ENST00000527889 ZBED5Q49AG3 693 aa3.7□□□□□ -1.82
CD44-226ENST00000527889 SYT14P1Q58G82 188 aa3.7□□□□□ -1.82
CD44-226ENST00000527889 ACER2Q5QJU3 275 aa3.7□□□□□ -1.82
CD44-226ENST00000527889 DCAF10Q5QP82 559 aa3.7□□□□□ -1.82
CD44-226ENST00000527889 SLC22A10Q63ZE4 541 aa3.7□□□□□ -1.82
CD44-226ENST00000527889 H3F3CQ6NXT2 135 aa3.7□□□□□ -1.82
CD44-226ENST00000527889 KCTD8Q6ZWB6 473 aa3.7□□□□□ -1.82
CD44-226ENST00000527889 GRINAQ7Z429 371 aa3.7□□□□□ -1.82
CD44-226ENST00000527889 MDGA2Q7Z553 956 aa3.7□□□□□ -1.82
CD44-226ENST00000527889 OAFQ86UD1 273 aa3.7□□□□□ -1.82
CD44-226ENST00000527889 ADGRG3Q86Y34 549 aa3.7□□□□□ -1.82
CD44-226ENST00000527889 MISPQ8IVT2 679 aa3.7□□□□□ -1.82
CD44-226ENST00000527889 CYP4Z2PQ8N1L4 340 aa3.7□□□□□ -1.82
CD44-226ENST00000527889 GHDCQ8N2G8 530 aa3.7□□□□□ -1.82
CD44-226ENST00000527889 CLDN22Q8N7P3 220 aa3.7□□□□□ -1.82
CD44-226ENST00000527889 FADS6Q8N9I5 356 aa3.7□□□□□ -1.82
CD44-226ENST00000527889 SCAIQ8N9R8 606 aa3.7□□□□□ -1.82
CD44-226ENST00000527889 WDSUB1Q8N9V3 476 aa3.7□□□□□ -1.82
CD44-226ENST00000527889 CYB561A3Q8NBI2 242 aa3.7□□□□□ -1.82
CD44-226ENST00000527889 ADPRHL1Q8NDY3 354 aa3.7□□□□□ -1.82
CD44-226ENST00000527889 CPEB3Q8NE35 698 aaKnown RBP3.7□□□□□ -1.82
CD44-226ENST00000527889 OR52L1Q8NGH7 329 aa3.7□□□□□ -1.82
CD44-226ENST00000527889 OR8J1Q8NGP2 316 aa3.7□□□□□ -1.82
CD44-226ENST00000527889 FAM110DQ8TAY7 271 aaPredicted RBP3.7□□□□□ -1.82
CD44-226ENST00000527889 TMEM163Q8TC26 289 aa3.7□□□□□ -1.82
CD44-226ENST00000527889 ST8SIA1Q92185 356 aa3.7□□□□□ -1.82
CD44-226ENST00000527889 PSMF1Q92530 271 aa3.7□□□□□ -1.82
CD44-226ENST00000527889 TNFRSF14Q92956 283 aa3.7□□□□□ -1.82
CD44-226ENST00000527889 SLAMF9Q96A28 289 aa3.7□□□□□ -1.82
CD44-226ENST00000527889 KIAA1143Q96AT1 154 aaPredicted RBP3.7□□□□□ -1.82
CD44-226ENST00000527889 OTULINQ96BN8 352 aa3.7□□□□□ -1.82
CD44-226ENST00000527889 SLC25A36Q96CQ1 311 aa3.7□□□□□ -1.82
CD44-226ENST00000527889 RASD2Q96D21 266 aa3.7□□□□□ -1.82
CD44-226ENST00000527889 PLEKHA8Q96JA3 519 aa3.7□□□□□ -1.82
CD44-226ENST00000527889 JSRP1Q96MG2 331 aaPredicted RBP3.7□□□□□ -1.82
CD44-226ENST00000527889 ZNF582Q96NG8 517 aaPredicted RBP3.7□□□□□ -1.82
CD44-226ENST00000527889 SLC38A2Q96QD8 506 aa3.7□□□□□ -1.82
CD44-226ENST00000527889 COPS4Q9BT78 406 aa3.7□□□□□ -1.82
CD44-226ENST00000527889 TMEM43Q9BTV4 400 aa3.7□□□□□ -1.82
CD44-226ENST00000527889 ALG8Q9BVK2 526 aa3.7□□□□□ -1.82
CD44-226ENST00000527889 POLDIP3Q9BY77 421 aaKnown RBP3.7□□□□□ -1.82
CD44-226ENST00000527889 HES7Q9BYE0 225 aa3.7□□□□□ -1.82
CD44-226ENST00000527889 CCDC90BQ9GZT6 254 aa3.7□□□□□ -1.82
CD44-226ENST00000527889 FN3KQ9H479 309 aa3.7□□□□□ -1.82
CD44-226ENST00000527889 DUSP21Q9H596 190 aa3.7□□□□□ -1.82
CD44-226ENST00000527889 ZCCHC4Q9H5U6 513 aa3.7□□□□□ -1.82
CD44-226ENST00000527889 TMEM185BQ9H7F4 350 aa3.7□□□□□ -1.82
CD44-226ENST00000527889 PROK2Q9HC23 129 aa3.7□□□□□ -1.82
CD44-226ENST00000527889 SH2D2AQ9NP31 389 aa3.7□□□□□ -1.82
CD44-226ENST00000527889 HINT3Q9NQE9 182 aaKnown RBP3.7□□□□□ -1.82
CD44-226ENST00000527889 KLHL1Q9NR64 748 aa3.7□□□□□ -1.82
CD44-226ENST00000527889 MED17Q9NVC6 651 aa3.7□□□□□ -1.82
CD44-226ENST00000527889 GPR83Q9NYM4 423 aa3.7□□□□□ -1.82
CD44-226ENST00000527889 TAS2R16Q9NYV7 291 aa3.7□□□□□ -1.82
CD44-226ENST00000527889 KIAA1456Q9P272 454 aa3.7□□□□□ -1.82
CD44-226ENST00000527889 SEC14L4Q9UDX3 406 aa3.7□□□□□ -1.82
CD44-226ENST00000527889 PSORS1C1Q9UIG5 152 aa3.7□□□□□ -1.82
CD44-226ENST00000527889 KLK13Q9UKR3 277 aa3.7□□□□□ -1.82
CD44-226ENST00000527889 SIGLEC7Q9Y286 467 aa3.7□□□□□ -1.82
CD44-226ENST00000527889 TPRKBQ9Y3C4 175 aa3.7□□□□□ -1.82
CD44-226ENST00000527889 ZNF337Q9Y3M9 751 aa3.7□□□□□ -1.82
CD44-226ENST00000527889 IER3IP1Q9Y5U9 82 aa3.7□□□□□ -1.82
CD44-226ENST00000527889 FBN1P35555 2871 aaKnown RBP3.7□□□□□ -1.82
CD44-226ENST00000527889 DSCAML1Q8TD84 2053 aa3.69□□□□□ -1.82
CD44-226ENST00000527889 TANC2Q9HCD6 1990 aa3.69□□□□□ -1.82
CD44-226ENST00000527889 CSMD1Q96PZ7 3565 aa3.69□□□□□ -1.82
CD44-226ENST00000527889 AKAP6Q13023 2319 aa3.69□□□□□ -1.82
CD44-226ENST00000527889 TRAV36DV7A0A075B6V5 113 aa3.69□□□□□ -1.82
CD44-226ENST00000527889 LOC390937A0A1W2PQ73 354 aa3.69□□□□□ -1.82
CD44-226ENST00000527889 PINLYPA6NC86 204 aa3.69□□□□□ -1.82
CD44-226ENST00000527889 TRABD2BA6NFA1 517 aa3.69□□□□□ -1.82
CD44-226ENST00000527889 CCDC160A6NGH7 325 aa3.69□□□□□ -1.82
CD44-226ENST00000527889 FAM90A8PA6NJQ4 464 aa3.69□□□□□ -1.82
CD44-226ENST00000527889 RIIAD1A6NNX1 92 aa3.69□□□□□ -1.82
CD44-226ENST00000527889 ZNF716A6NP11 495 aa3.69□□□□□ -1.82
CD44-226ENST00000527889 KDM4EB2RXH2 506 aaPredicted RBP3.69□□□□□ -1.82
CD44-226ENST00000527889 H3BSA7 217 aa3.69□□□□□ -1.82
CD44-226ENST00000527889 H7C1C5 153 aa3.69□□□□□ -1.82
CD44-226ENST00000527889 SLC33A1O00400 549 aaPredicted RBP3.69□□□□□ -1.82
CD44-226ENST00000527889 PRYO14603 147 aa3.69□□□□□ -1.82
CD44-226ENST00000527889 IMPA2O14732 288 aa3.69□□□□□ -1.82
CD44-226ENST00000527889 EFNA2O43921 213 aa3.69□□□□□ -1.82
CD44-226ENST00000527889 MPZL2O60487 215 aa3.69□□□□□ -1.82
CD44-226ENST00000527889 NPIPB7O75200 414 aa3.69□□□□□ -1.82
CD44-226ENST00000527889 CLPXO76031 633 aa3.69□□□□□ -1.82
CD44-226ENST00000527889 NXPH3O95157 252 aa3.69□□□□□ -1.82
CD44-226ENST00000527889 NDUFB2O95178 105 aa3.69□□□□□ -1.82
CD44-226ENST00000527889 AHSA1O95433 338 aa3.69□□□□□ -1.82
CD44-226ENST00000527889 WDPCPO95876 746 aa3.69□□□□□ -1.82
CD44-226ENST00000527889 P04436 131 aa3.69□□□□□ -1.82
CD44-226ENST00000527889 GYPBP06028 91 aa3.69□□□□□ -1.82
CD44-226ENST00000527889 LCKP06239 509 aa3.69□□□□□ -1.82
CD44-226ENST00000527889 CDK1P06493 297 aa3.69□□□□□ -1.82
CD44-226ENST00000527889 ASAH2BP0C7U1 165 aa3.69□□□□□ -1.82
CD44-226ENST00000527889 FAM90A13PP0C7W8 464 aa3.69□□□□□ -1.82
CD44-226ENST00000527889 FAM90A24PP0C7X0 464 aa3.69□□□□□ -1.82
CD44-226ENST00000527889 ZNF735P0CB33 412 aa3.69□□□□□ -1.82
CD44-226ENST00000527889 TFPIP10646 304 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms