RNA–Protein interactions for RNA: ENST00000527644.1

TSPAN4-217, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 968 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-217ENST00000527644 MAP6Q96JE9 813 aa22.4■■□□□ 1.18
TSPAN4-217ENST00000527644 SOX7Q9BT81 388 aa22.4■■□□□ 1.18
TSPAN4-217ENST00000527644 CDC42EP3Q9UKI2 254 aa22.4■■□□□ 1.18
TSPAN4-217ENST00000527644 ACSM4P0C7M7 580 aa22.39■■□□□ 1.17
TSPAN4-217ENST00000527644 SLC27A4Q6P1M0 643 aa22.39■■□□□ 1.17
TSPAN4-217ENST00000527644 PRIMA1Q86XR5 153 aa22.39■■□□□ 1.17
TSPAN4-217ENST00000527644 HS3ST5Q8IZT8 346 aa22.39■■□□□ 1.17
TSPAN4-217ENST00000527644 IQCF1Q8N6M8 205 aa22.39■■□□□ 1.17
TSPAN4-217ENST00000527644 NRBF2Q96F24 287 aa22.39■■□□□ 1.17
TSPAN4-217ENST00000527644 C1QTNF5Q9BXJ0 243 aa22.39■■□□□ 1.17
TSPAN4-217ENST00000527644 PTTG3PQ9NZH4 202 aa22.39■■□□□ 1.17
TSPAN4-217ENST00000527644 COMMD3-BMI1R4GMX3 469 aa22.39■■□□□ 1.17
TSPAN4-217ENST00000527644 F5H5K5 113 aa22.38■■□□□ 1.17
TSPAN4-217ENST00000527644 DEAF1O75398 565 aaPredicted RBP22.38■■□□□ 1.17
TSPAN4-217ENST00000527644 GYPBP06028 91 aa22.38■■□□□ 1.17
TSPAN4-217ENST00000527644 OSMP13725 252 aa22.38■■□□□ 1.17
TSPAN4-217ENST00000527644 PRKACGP22612 351 aa22.38■■□□□ 1.17
TSPAN4-217ENST00000527644 POU1F1P28069 291 aa22.38■■□□□ 1.17
TSPAN4-217ENST00000527644 PCK2Q16822 640 aa22.38■■□□□ 1.17
TSPAN4-217ENST00000527644 LYPD4Q6UWN0 246 aa22.38■■□□□ 1.17
TSPAN4-217ENST00000527644 LINC01356Q8N9X3 169 aa22.38■■□□□ 1.17
TSPAN4-217ENST00000527644 ZNF511Q8NB15 262 aa22.38■■□□□ 1.17
TSPAN4-217ENST00000527644 CLDND2Q8NHS1 167 aa22.38■■□□□ 1.17
TSPAN4-217ENST00000527644 WDR76Q9H967 626 aa22.38■■□□□ 1.17
TSPAN4-217ENST00000527644 CLUP10909 449 aa22.37■■□□□ 1.17
TSPAN4-217ENST00000527644 TNFSF4P23510 183 aa22.37■■□□□ 1.17
TSPAN4-217ENST00000527644 RPS27P42677 84 aaKnown RBP22.37■■□□□ 1.17
TSPAN4-217ENST00000527644 ENTPD1P49961 510 aa22.37■■□□□ 1.17
TSPAN4-217ENST00000527644 TPTEP56180 551 aa22.37■■□□□ 1.17
TSPAN4-217ENST00000527644 TNFAIP6P98066 277 aaPredicted RBP22.37■■□□□ 1.17
TSPAN4-217ENST00000527644 CCNIQ14094 377 aa22.37■■□□□ 1.17
TSPAN4-217ENST00000527644 GINS1Q14691 196 aa22.37■■□□□ 1.17
TSPAN4-217ENST00000527644 HLXQ14774 488 aaPredicted RBP22.37■■□□□ 1.17
TSPAN4-217ENST00000527644 TEX30Q5JUR7 227 aa22.37■■□□□ 1.17
TSPAN4-217ENST00000527644 SHQ1Q6PI26 577 aaKnown RBP22.37■■□□□ 1.17
TSPAN4-217ENST00000527644 Q6ZR03 302 aa22.37■■□□□ 1.17
TSPAN4-217ENST00000527644 ATG16L2Q8NAA4 619 aa22.37■■□□□ 1.17
TSPAN4-217ENST00000527644 SPTSSAQ969W0 71 aa22.37■■□□□ 1.17
TSPAN4-217ENST00000527644 NTN4Q9HB63 628 aa22.37■■□□□ 1.17
TSPAN4-217ENST00000527644 DDX28Q9NUL7 540 aaKnown RBP22.37■■□□□ 1.17
TSPAN4-217ENST00000527644 LPAR3Q9UBY5 353 aa22.37■■□□□ 1.17
TSPAN4-217ENST00000527644 CLDN25C9JDP6 229 aa22.36■■□□□ 1.17
TSPAN4-217ENST00000527644 ZNF593O00488 134 aaPredicted RBP22.36■■□□□ 1.17
TSPAN4-217ENST00000527644 TIPRLO75663 272 aa22.36■■□□□ 1.17
TSPAN4-217ENST00000527644 CDH15P55291 814 aa22.36■■□□□ 1.17
TSPAN4-217ENST00000527644 ACSM5Q6NUN0 579 aa22.36■■□□□ 1.17
TSPAN4-217ENST00000527644 DCXRQ7Z4W1 244 aa22.36■■□□□ 1.17
TSPAN4-217ENST00000527644 OR10S1Q8NGN2 331 aa22.36■■□□□ 1.17
TSPAN4-217ENST00000527644 OR6K6Q8NGW6 343 aa22.36■■□□□ 1.17
TSPAN4-217ENST00000527644 CCL17Q92583 94 aa22.36■■□□□ 1.17
TSPAN4-217ENST00000527644 UTP4Q969X6 686 aaKnown RBP22.36■■□□□ 1.17
TSPAN4-217ENST00000527644 BEX2Q9BXY8 128 aa22.36■■□□□ 1.17
TSPAN4-217ENST00000527644 NARFLQ9H6Q4 476 aa22.36■■□□□ 1.17
TSPAN4-217ENST00000527644 CACNG2Q9Y698 323 aa22.36■■□□□ 1.17
TSPAN4-217ENST00000527644 WNT9BO14905 357 aa22.35■■□□□ 1.17
TSPAN4-217ENST00000527644 HMGN1P05114 100 aa22.35■■□□□ 1.17
TSPAN4-217ENST00000527644 SPARCP09486 303 aa22.35■■□□□ 1.17
TSPAN4-217ENST00000527644 PAICSP22234 425 aaKnown RBP22.35■■□□□ 1.17
TSPAN4-217ENST00000527644 IGFBP5P24593 272 aa22.35■■□□□ 1.17
TSPAN4-217ENST00000527644 CDK5Q00535 292 aa22.35■■□□□ 1.17
TSPAN4-217ENST00000527644 SLC3A1Q07837 685 aa22.35■■□□□ 1.17
TSPAN4-217ENST00000527644 LINC01590Q5TEZ4 76 aa22.35■■□□□ 1.17
TSPAN4-217ENST00000527644 OR2T2Q6IF00 324 aa22.35■■□□□ 1.17
TSPAN4-217ENST00000527644 OR2Z1Q8NG97 314 aa22.35■■□□□ 1.17
TSPAN4-217ENST00000527644 DNAJC9Q8WXX5 260 aa22.35■■□□□ 1.17
TSPAN4-217ENST00000527644 TIMD4Q96H15 378 aa22.35■■□□□ 1.17
TSPAN4-217ENST00000527644 SHARPINQ9H0F6 387 aa22.35■■□□□ 1.17
TSPAN4-217ENST00000527644 FAM183AA6NL82 134 aa22.34■■□□□ 1.17
TSPAN4-217ENST00000527644 B4DSR2 109 aa22.34■■□□□ 1.17
TSPAN4-217ENST00000527644 M0R135 149 aa22.34■■□□□ 1.17
TSPAN4-217ENST00000527644 LCATP04180 440 aa22.34■■□□□ 1.17
TSPAN4-217ENST00000527644 PSKH1P11801 424 aa22.34■■□□□ 1.17
TSPAN4-217ENST00000527644 MVKQ03426 396 aa22.34■■□□□ 1.17
TSPAN4-217ENST00000527644 C1orf146Q5VVC0 180 aa22.34■■□□□ 1.17
TSPAN4-217ENST00000527644 NAA40Q86UY6 237 aa22.34■■□□□ 1.17
TSPAN4-217ENST00000527644 OR5AS1Q8N127 324 aa22.34■■□□□ 1.17
TSPAN4-217ENST00000527644 OR8G5Q8NG78 346 aa22.34■■□□□ 1.17
TSPAN4-217ENST00000527644 RAB1CQ92928 201 aa22.34■■□□□ 1.17
TSPAN4-217ENST00000527644 OTULINQ96BN8 352 aa22.34■■□□□ 1.17
TSPAN4-217ENST00000527644 ZNF799Q96GE5 643 aa22.34■■□□□ 1.17
TSPAN4-217ENST00000527644 ZNF582Q96NG8 517 aaPredicted RBP22.34■■□□□ 1.17
TSPAN4-217ENST00000527644 HCAR1Q9BXC0 346 aa22.34■■□□□ 1.17
TSPAN4-217ENST00000527644 MED20Q9H944 212 aa22.34■■□□□ 1.17
TSPAN4-217ENST00000527644 SURF4O15260 269 aa22.33■■□□□ 1.17
TSPAN4-217ENST00000527644 SELEP16581 610 aa22.33■■□□□ 1.17
TSPAN4-217ENST00000527644 TNFRSF1AP19438 455 aa22.33■■□□□ 1.17
TSPAN4-217ENST00000527644 OTX1P32242 354 aaPredicted RBP22.33■■□□□ 1.17
TSPAN4-217ENST00000527644 MALLQ13021 153 aa22.33■■□□□ 1.17
TSPAN4-217ENST00000527644 SPRNQ5BIV9 151 aa22.33■■□□□ 1.17
TSPAN4-217ENST00000527644 AVPI1Q5T686 147 aa22.33■■□□□ 1.17
TSPAN4-217ENST00000527644 OR5K1Q8NHB7 308 aa22.33■■□□□ 1.17
TSPAN4-217ENST00000527644 TEX12Q9BXU0 123 aa22.33■■□□□ 1.17
TSPAN4-217ENST00000527644 TREM2Q9NZC2 230 aa22.33■■□□□ 1.17
TSPAN4-217ENST00000527644 KIF17Q9P2E2 1029 aa22.33■■□□□ 1.17
TSPAN4-217ENST00000527644 IL19Q9UHD0 177 aa22.33■■□□□ 1.17
TSPAN4-217ENST00000527644 WIPI2Q9Y4P8 454 aa22.33■■□□□ 1.17
TSPAN4-217ENST00000527644 IQCF6A8MYZ5 107 aa22.32■■□□□ 1.16
TSPAN4-217ENST00000527644 PRR23D1E9PI22 279 aaPredicted RBP22.32■■□□□ 1.16
TSPAN4-217ENST00000527644 GLCEO94923 617 aa22.32■■□□□ 1.16
TSPAN4-217ENST00000527644 FAM157CP0CG43 387 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms