RNA–Protein interactions for RNA: ENST00000526971.1

PKP3-204, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 532 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-204ENST00000526971 SNX33Q8WV41 574 aa16.27■□□□□ 0.2
PKP3-204ENST00000526971 IPCEF1Q8WWN9 437 aaPredicted RBP16.27■□□□□ 0.2
PKP3-204ENST00000526971 MAP6Q96JE9 813 aa16.27■□□□□ 0.2
PKP3-204ENST00000526971 HCAR1Q9BXC0 346 aa16.27■□□□□ 0.2
PKP3-204ENST00000526971 MED20Q9H944 212 aa16.27■□□□□ 0.2
PKP3-204ENST00000526971 WDR76Q9H967 626 aa16.27■□□□□ 0.2
PKP3-204ENST00000526971 SLC25A19Q9HC21 320 aa16.27■□□□□ 0.2
PKP3-204ENST00000526971 PNRC2Q9NPJ4 139 aaKnown RBP16.27■□□□□ 0.2
PKP3-204ENST00000526971 STARD10Q9Y365 291 aa16.27■□□□□ 0.2
PKP3-204ENST00000526971 COMMD3-BMI1R4GMX3 469 aa16.27■□□□□ 0.2
PKP3-204ENST00000526971 C17orf100A8MU93 164 aa16.26■□□□□ 0.19
PKP3-204ENST00000526971 J3QW42 95 aa16.26■□□□□ 0.19
PKP3-204ENST00000526971 ZNF23P17027 643 aa16.26■□□□□ 0.19
PKP3-204ENST00000526971 PAICSP22234 425 aaKnown RBP16.26■□□□□ 0.19
PKP3-204ENST00000526971 RGS6P49758 472 aa16.26■□□□□ 0.19
PKP3-204ENST00000526971 CRISP1P54107 249 aa16.26■□□□□ 0.19
PKP3-204ENST00000526971 PCK2Q16822 640 aa16.26■□□□□ 0.19
PKP3-204ENST00000526971 TMEM255AQ5JRV8 349 aa16.26■□□□□ 0.19
PKP3-204ENST00000526971 TMEM236Q5W0B7 351 aa16.26■□□□□ 0.19
PKP3-204ENST00000526971 ZNF786Q8N393 782 aa16.26■□□□□ 0.19
PKP3-204ENST00000526971 OR6K6Q8NGW6 343 aa16.26■□□□□ 0.19
PKP3-204ENST00000526971 UBASH3BQ8TF42 649 aa16.26■□□□□ 0.19
PKP3-204ENST00000526971 PYDC1Q8WXC3 89 aa16.26■□□□□ 0.19
PKP3-204ENST00000526971 OTULINQ96BN8 352 aa16.26■□□□□ 0.19
PKP3-204ENST00000526971 CENPNQ96H22 339 aaPredicted RBP16.26■□□□□ 0.19
PKP3-204ENST00000526971 C1orf159Q96HA4 380 aa16.26■□□□□ 0.19
PKP3-204ENST00000526971 COG8Q96MW5 612 aa16.26■□□□□ 0.19
PKP3-204ENST00000526971 ATF6BQ99941 703 aa16.26■□□□□ 0.19
PKP3-204ENST00000526971 TEX12Q9BXU0 123 aa16.26■□□□□ 0.19
PKP3-204ENST00000526971 GABARAPL1Q9H0R8 117 aa16.26■□□□□ 0.19
PKP3-204ENST00000526971 POFUT1Q9H488 388 aa16.26■□□□□ 0.19
PKP3-204ENST00000526971 TENM1Q9UKZ4 2725 aa16.26■□□□□ 0.19
PKP3-204ENST00000526971 LRP5LA4QPB2 252 aa16.25■□□□□ 0.19
PKP3-204ENST00000526971 PRR23D1E9PI22 279 aaPredicted RBP16.25■□□□□ 0.19
PKP3-204ENST00000526971 ZNF593O00488 134 aaPredicted RBP16.25■□□□□ 0.19
PKP3-204ENST00000526971 MT-ND5P03915 603 aa16.25■□□□□ 0.19
PKP3-204ENST00000526971 PRR23D2P0DMB1 279 aaPredicted RBP16.25■□□□□ 0.19
PKP3-204ENST00000526971 PSKH1P11801 424 aa16.25■□□□□ 0.19
PKP3-204ENST00000526971 IL2RGP31785 369 aa16.25■□□□□ 0.19
PKP3-204ENST00000526971 RPS27P42677 84 aaKnown RBP16.25■□□□□ 0.19
PKP3-204ENST00000526971 ENTPD1P49961 510 aa16.25■□□□□ 0.19
PKP3-204ENST00000526971 ESRRGP62508 458 aa16.25■□□□□ 0.19
PKP3-204ENST00000526971 CR1LQ2VPA4 569 aa16.25■□□□□ 0.19
PKP3-204ENST00000526971 PCGF3Q3KNV8 242 aa16.25■□□□□ 0.19
PKP3-204ENST00000526971 TEX30Q5JUR7 227 aa16.25■□□□□ 0.19
PKP3-204ENST00000526971 PLBD1Q6P4A8 553 aa16.25■□□□□ 0.19
PKP3-204ENST00000526971 SEMA6AQ9H2E6 1030 aa16.25■□□□□ 0.19
PKP3-204ENST00000526971 KRT84Q9NSB2 600 aa16.25■□□□□ 0.19
PKP3-204ENST00000526971 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.25■□□□□ 0.19
PKP3-204ENST00000526971 MITFO75030 526 aaPredicted RBP16.24■□□□□ 0.19
PKP3-204ENST00000526971 GLCEO94923 617 aa16.24■□□□□ 0.19
PKP3-204ENST00000526971 TGFAP01135 160 aa16.24■□□□□ 0.19
PKP3-204ENST00000526971 HPXP02790 462 aa16.24■□□□□ 0.19
PKP3-204ENST00000526971 SPARCP09486 303 aa16.24■□□□□ 0.19
PKP3-204ENST00000526971 GSTT1P30711 240 aa16.24■□□□□ 0.19
PKP3-204ENST00000526971 MMP15P51511 669 aa16.24■□□□□ 0.19
PKP3-204ENST00000526971 PSG7Q13046 419 aa16.24■□□□□ 0.19
PKP3-204ENST00000526971 KDM4DQ6B0I6 523 aa16.24■□□□□ 0.19
PKP3-204ENST00000526971 ZNF540Q8NDQ6 660 aa16.24■□□□□ 0.19
PKP3-204ENST00000526971 OR10S1Q8NGN2 331 aa16.24■□□□□ 0.19
PKP3-204ENST00000526971 GTF3AQ92664 365 aaKnown RBP16.24■□□□□ 0.19
PKP3-204ENST00000526971 APOBEC3DQ96AK3 386 aaPredicted RBP16.24■□□□□ 0.19
PKP3-204ENST00000526971 CMBLQ96DG6 245 aa16.24■□□□□ 0.19
PKP3-204ENST00000526971 PLEKHA8Q96JA3 519 aa16.24■□□□□ 0.19
PKP3-204ENST00000526971 OR51V1Q9H2C8 321 aa16.24■□□□□ 0.19
PKP3-204ENST00000526971 CYSLTR2Q9NS75 346 aa16.24■□□□□ 0.19
PKP3-204ENST00000526971 NKIRAS2Q9NYR9 191 aa16.24■□□□□ 0.19
PKP3-204ENST00000526971 DYSFO75923 2080 aa16.23■□□□□ 0.19
PKP3-204ENST00000526971 PLSCR5A0PG75 271 aa16.23■□□□□ 0.19
PKP3-204ENST00000526971 F5H5K5 113 aa16.23■□□□□ 0.19
PKP3-204ENST00000526971 H3BNX3 289 aa16.23■□□□□ 0.19
PKP3-204ENST00000526971 ACSM4P0C7M7 580 aa16.23■□□□□ 0.19
PKP3-204ENST00000526971 HNF1AP20823 631 aa16.23■□□□□ 0.19
PKP3-204ENST00000526971 GIFP27352 417 aa16.23■□□□□ 0.19
PKP3-204ENST00000526971 LIPAP38571 399 aa16.23■□□□□ 0.19
PKP3-204ENST00000526971 MAGEB1P43366 347 aa16.23■□□□□ 0.19
PKP3-204ENST00000526971 ZNF81P51508 661 aa16.23■□□□□ 0.19
PKP3-204ENST00000526971 PTGES3Q15185 160 aaKnown RBP16.23■□□□□ 0.19
PKP3-204ENST00000526971 ZFP1Q6P2D0 407 aa16.23■□□□□ 0.19
PKP3-204ENST00000526971 COLCA1Q6ZS62 124 aa16.23■□□□□ 0.19
PKP3-204ENST00000526971 DCXRQ7Z4W1 244 aa16.23■□□□□ 0.19
PKP3-204ENST00000526971 CPOQ8IVL8 374 aa16.23■□□□□ 0.19
PKP3-204ENST00000526971 C10orf67Q8IYJ2 551 aa16.23■□□□□ 0.19
PKP3-204ENST00000526971 OR5L1Q8NGL2 311 aa16.23■□□□□ 0.19
PKP3-204ENST00000526971 RDH5Q92781 318 aa16.23■□□□□ 0.19
PKP3-204ENST00000526971 HAVCR1Q96D42 359 aa16.23■□□□□ 0.19
PKP3-204ENST00000526971 MARCH7Q9H992 704 aa16.23■□□□□ 0.19
PKP3-204ENST00000526971 DDX28Q9NUL7 540 aaKnown RBP16.23■□□□□ 0.19
PKP3-204ENST00000526971 TVP23BQ9NYZ1 205 aa16.23■□□□□ 0.19
PKP3-204ENST00000526971 CGGBP1Q9UFW8 167 aaPredicted RBP16.23■□□□□ 0.19
PKP3-204ENST00000526971 OAZ3Q9UMX2 235 aa16.23■□□□□ 0.19
PKP3-204ENST00000526971 LYNX1G3V0Z9 82 aa16.22■□□□□ 0.19
PKP3-204ENST00000526971 TIMM8AO60220 97 aaPredicted RBP16.22■□□□□ 0.19
PKP3-204ENST00000526971 NCR1O76036 304 aa16.22■□□□□ 0.19
PKP3-204ENST00000526971 LYNX1P0DP58 116 aa16.22■□□□□ 0.19
PKP3-204ENST00000526971 KITLGP21583 273 aa16.22■□□□□ 0.19
PKP3-204ENST00000526971 MRPS11P82912 194 aaKnown RBP16.22■□□□□ 0.19
PKP3-204ENST00000526971 SNAPC1Q16533 368 aa16.22■□□□□ 0.19
PKP3-204ENST00000526971 SPTSSAQ969W0 71 aa16.22■□□□□ 0.19
PKP3-204ENST00000526971 RAB3IPQ96QF0 476 aaPredicted RBP16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms