RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 ACSM4P0C7M7 580 aa11.11□□□□□ -0.63
SMPD1-202ENST00000526280 ATP6V1B1P15313 513 aa11.11□□□□□ -0.63
SMPD1-202ENST00000526280 ZNF250P15622 560 aa11.11□□□□□ -0.63
SMPD1-202ENST00000526280 PAX1P15863 534 aa11.11□□□□□ -0.63
SMPD1-202ENST00000526280 ALOX5APP20292 161 aa11.11□□□□□ -0.63
SMPD1-202ENST00000526280 OTX1P32242 354 aaPredicted RBP11.11□□□□□ -0.63
SMPD1-202ENST00000526280 EVX1P49640 407 aa11.11□□□□□ -0.63
SMPD1-202ENST00000526280 NUDT6P53370 316 aa11.11□□□□□ -0.63
SMPD1-202ENST00000526280 HCCSP53701 268 aa11.11□□□□□ -0.63
SMPD1-202ENST00000526280 ERVS71-1P61550 626 aa11.11□□□□□ -0.63
SMPD1-202ENST00000526280 TMED1Q13445 227 aa11.11□□□□□ -0.63
SMPD1-202ENST00000526280 DEFB113Q30KQ7 82 aa11.11□□□□□ -0.63
SMPD1-202ENST00000526280 CNPY1Q3B7I2 92 aa11.11□□□□□ -0.63
SMPD1-202ENST00000526280 KCTD21Q4G0X4 260 aa11.11□□□□□ -0.63
SMPD1-202ENST00000526280 MEDAGQ5VYS4 303 aa11.11□□□□□ -0.63
SMPD1-202ENST00000526280 TTC23Q5W5X9 447 aa11.11□□□□□ -0.63
SMPD1-202ENST00000526280 RGS7BPQ6MZT1 257 aaPredicted RBP11.11□□□□□ -0.63
SMPD1-202ENST00000526280 COLCA1Q6ZS62 124 aa11.11□□□□□ -0.63
SMPD1-202ENST00000526280 RFPL4BQ6ZWI9 263 aa11.11□□□□□ -0.63
SMPD1-202ENST00000526280 USP51Q70EK9 711 aa11.11□□□□□ -0.63
SMPD1-202ENST00000526280 RHOUQ7L0Q8 258 aa11.11□□□□□ -0.63
SMPD1-202ENST00000526280 SATL1Q86VE3 508 aa11.11□□□□□ -0.63
SMPD1-202ENST00000526280 LURAP1LQ8IV03 231 aa11.11□□□□□ -0.63
SMPD1-202ENST00000526280 ENTHD1Q8IYW4 607 aa11.11□□□□□ -0.63
SMPD1-202ENST00000526280 OR1J1Q8NGS3 322 aa11.11□□□□□ -0.63
SMPD1-202ENST00000526280 ABHD4Q8TB40 342 aa11.11□□□□□ -0.63
SMPD1-202ENST00000526280 THEM6Q8WUY1 208 aa11.11□□□□□ -0.63
SMPD1-202ENST00000526280 RFKQ969G6 155 aa11.11□□□□□ -0.63
SMPD1-202ENST00000526280 AMELYQ99218 206 aa11.11□□□□□ -0.63
SMPD1-202ENST00000526280 CNN2Q99439 309 aaKnown RBP11.11□□□□□ -0.63
SMPD1-202ENST00000526280 TSC22D3Q99576 134 aa11.11□□□□□ -0.63
SMPD1-202ENST00000526280 MRPL37Q9BZE1 423 aaKnown RBP11.11□□□□□ -0.63
SMPD1-202ENST00000526280 PLK3Q9H4B4 646 aa11.11□□□□□ -0.63
SMPD1-202ENST00000526280 ADGRL4Q9HBW9 690 aa11.11□□□□□ -0.63
SMPD1-202ENST00000526280 CENPMQ9NSP4 180 aa11.11□□□□□ -0.63
SMPD1-202ENST00000526280 ZNF701Q9NV72 531 aaPredicted RBP11.11□□□□□ -0.63
SMPD1-202ENST00000526280 KLHDC2Q9Y2U9 406 aa11.11□□□□□ -0.63
SMPD1-202ENST00000526280 AKAP9Q99996 3911 aa11.11□□□□□ -0.63
SMPD1-202ENST00000526280 ZNF878C9JN71 531 aa11.1□□□□□ -0.63
SMPD1-202ENST00000526280 J3QW42 95 aa11.1□□□□□ -0.63
SMPD1-202ENST00000526280 MRPL3P09001 348 aaKnown RBP11.1□□□□□ -0.63
SMPD1-202ENST00000526280 SBK2P0C263 348 aa11.1□□□□□ -0.63
SMPD1-202ENST00000526280 BMP4P12644 408 aa11.1□□□□□ -0.63
SMPD1-202ENST00000526280 TUBG1P23258 451 aa11.1□□□□□ -0.63
SMPD1-202ENST00000526280 SLC15A1P46059 708 aa11.1□□□□□ -0.63
SMPD1-202ENST00000526280 RGS6P49758 472 aa11.1□□□□□ -0.63
SMPD1-202ENST00000526280 TPTEP56180 551 aa11.1□□□□□ -0.63
SMPD1-202ENST00000526280 PPP1CBP62140 327 aa11.1□□□□□ -0.63
SMPD1-202ENST00000526280 NAA40Q86UY6 237 aa11.1□□□□□ -0.63
SMPD1-202ENST00000526280 LRP11Q86VZ4 500 aa11.1□□□□□ -0.63
SMPD1-202ENST00000526280 ZNF786Q8N393 782 aa11.1□□□□□ -0.63
SMPD1-202ENST00000526280 SPTSSAQ969W0 71 aa11.1□□□□□ -0.63
SMPD1-202ENST00000526280 MARS2Q96GW9 593 aaKnown RBP11.1□□□□□ -0.63
SMPD1-202ENST00000526280 DOK1Q99704 481 aa11.1□□□□□ -0.63
SMPD1-202ENST00000526280 KCNJ15Q99712 375 aa11.1□□□□□ -0.63
SMPD1-202ENST00000526280 APOL4Q9BPW4 351 aa11.1□□□□□ -0.63
SMPD1-202ENST00000526280 COPS4Q9BT78 406 aa11.1□□□□□ -0.63
SMPD1-202ENST00000526280 C1QTNF5Q9BXJ0 243 aa11.1□□□□□ -0.63
SMPD1-202ENST00000526280 YTHDF1Q9BYJ9 559 aaKnown RBP11.1□□□□□ -0.63
SMPD1-202ENST00000526280 TUBG2Q9NRH3 451 aa11.1□□□□□ -0.63
SMPD1-202ENST00000526280 AASSQ9UDR5 926 aa11.1□□□□□ -0.63
SMPD1-202ENST00000526280 LAMP5Q9UJQ1 280 aa11.1□□□□□ -0.63
SMPD1-202ENST00000526280 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.1□□□□□ -0.63
SMPD1-202ENST00000526280 FZR1Q9UM11 496 aa11.1□□□□□ -0.63
SMPD1-202ENST00000526280 STARD10Q9Y365 291 aa11.1□□□□□ -0.63
SMPD1-202ENST00000526280 IGLV3-9A0A075B6K5 115 aa11.09□□□□□ -0.63
SMPD1-202ENST00000526280 H3BSA7 217 aa11.09□□□□□ -0.63
SMPD1-202ENST00000526280 M0R135 149 aa11.09□□□□□ -0.63
SMPD1-202ENST00000526280 CDKN1AP38936 164 aa11.09□□□□□ -0.63
SMPD1-202ENST00000526280 OPRL1P41146 370 aa11.09□□□□□ -0.63
SMPD1-202ENST00000526280 ALDH3B2P48448 385 aa11.09□□□□□ -0.63
SMPD1-202ENST00000526280 SNRPD2P62316 118 aaKnown RBP11.09□□□□□ -0.63
SMPD1-202ENST00000526280 GRB2P62993 217 aaKnown RBP11.09□□□□□ -0.63
SMPD1-202ENST00000526280 POU4F2Q12837 409 aa11.09□□□□□ -0.63
SMPD1-202ENST00000526280 TAF13Q15543 124 aa11.09□□□□□ -0.63
SMPD1-202ENST00000526280 ZNF718Q3SXZ3 478 aa11.09□□□□□ -0.63
SMPD1-202ENST00000526280 SPATA46Q5T0L3 261 aa11.09□□□□□ -0.63
SMPD1-202ENST00000526280 ZNF691Q5VV52 312 aa11.09□□□□□ -0.63
SMPD1-202ENST00000526280 MBNL2Q5VZF2 373 aaKnown RBP11.09□□□□□ -0.63
SMPD1-202ENST00000526280 SPATC1Q76KD6 591 aa11.09□□□□□ -0.63
SMPD1-202ENST00000526280 SLC35F2Q8IXU6 374 aa11.09□□□□□ -0.63
SMPD1-202ENST00000526280 OR51G2Q8NGK0 314 aa11.09□□□□□ -0.63
SMPD1-202ENST00000526280 SYNPRQ8TBG9 265 aa11.09□□□□□ -0.63
SMPD1-202ENST00000526280 SLC25A40Q8TBP6 338 aa11.09□□□□□ -0.63
SMPD1-202ENST00000526280 KLF14Q8TD94 323 aaPredicted RBP11.09□□□□□ -0.63
SMPD1-202ENST00000526280 APOBEC3DQ96AK3 386 aaPredicted RBP11.09□□□□□ -0.63
SMPD1-202ENST00000526280 DGCR14Q96DF8 476 aaKnown RBP11.09□□□□□ -0.63
SMPD1-202ENST00000526280 ZNF799Q96GE5 643 aa11.09□□□□□ -0.63
SMPD1-202ENST00000526280 Q96MT0 163 aa11.09□□□□□ -0.63
SMPD1-202ENST00000526280 COG8Q96MW5 612 aa11.09□□□□□ -0.63
SMPD1-202ENST00000526280 MNTQ99583 582 aa11.09□□□□□ -0.63
SMPD1-202ENST00000526280 FOXC2Q99958 501 aa11.09□□□□□ -0.63
SMPD1-202ENST00000526280 SYT3Q9BQG1 590 aa11.09□□□□□ -0.63
SMPD1-202ENST00000526280 CACNG6Q9BXT2 260 aa11.09□□□□□ -0.63
SMPD1-202ENST00000526280 GSX2Q9BZM3 304 aa11.09□□□□□ -0.63
SMPD1-202ENST00000526280 OR2J1Q9GZK6 312 aa11.09□□□□□ -0.63
SMPD1-202ENST00000526280 POFUT1Q9H488 388 aa11.09□□□□□ -0.63
SMPD1-202ENST00000526280 CLN6Q9NWW5 311 aa11.09□□□□□ -0.63
SMPD1-202ENST00000526280 DUSP13Q9UII6 198 aa11.09□□□□□ -0.63
SMPD1-202ENST00000526280 TMEM14AQ9Y6G1 99 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms