RNA–Protein interactions for RNA: ENST00000526216.1

COLCA2-202, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best) BASIC

Gene COLCA2, Length 1,332 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-202ENST00000526216 LOC100509620A0A075B734 347 aa12.53□□□□□ -0.4
COLCA2-202ENST00000526216 H3BMQ9 156 aa12.53□□□□□ -0.4
COLCA2-202ENST00000526216 UBL3O95164 117 aa12.53□□□□□ -0.4
COLCA2-202ENST00000526216 HSD11B1P28845 292 aa12.53□□□□□ -0.4
COLCA2-202ENST00000526216 GABRA5P31644 462 aa12.53□□□□□ -0.4
COLCA2-202ENST00000526216 MAGEB1P43366 347 aa12.53□□□□□ -0.4
COLCA2-202ENST00000526216 HTR5AP47898 357 aa12.53□□□□□ -0.4
COLCA2-202ENST00000526216 CX3CR1P49238 355 aa12.53□□□□□ -0.4
COLCA2-202ENST00000526216 MMP16P51512 607 aa12.53□□□□□ -0.4
COLCA2-202ENST00000526216 CCR9P51686 369 aa12.53□□□□□ -0.4
COLCA2-202ENST00000526216 ZNF121P58317 390 aaPredicted RBP12.53□□□□□ -0.4
COLCA2-202ENST00000526216 LSM3P62310 102 aaKnown RBP12.53□□□□□ -0.4
COLCA2-202ENST00000526216 RAB1AP62820 205 aa12.53□□□□□ -0.4
COLCA2-202ENST00000526216 GRB2P62993 217 aaKnown RBP12.53□□□□□ -0.4
COLCA2-202ENST00000526216 TGFBR3Q03167 851 aa12.53□□□□□ -0.4
COLCA2-202ENST00000526216 FAM27E3Q08E93 113 aa12.53□□□□□ -0.4
COLCA2-202ENST00000526216 CDSNQ15517 529 aa12.53□□□□□ -0.4
COLCA2-202ENST00000526216 FJX1Q86VR8 437 aa12.53□□□□□ -0.4
COLCA2-202ENST00000526216 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.53□□□□□ -0.4
COLCA2-202ENST00000526216 GALNT11Q8NCW6 608 aa12.53□□□□□ -0.4
COLCA2-202ENST00000526216 C12orf43Q96C57 262 aaKnown RBP12.53□□□□□ -0.4
COLCA2-202ENST00000526216 CCDC120Q96HB5 630 aa12.53□□□□□ -0.4
COLCA2-202ENST00000526216 CENPOQ9BU64 300 aa12.53□□□□□ -0.4
COLCA2-202ENST00000526216 FAM192AQ9GZU8 254 aa12.53□□□□□ -0.4
COLCA2-202ENST00000526216 RNF121Q9H920 327 aa12.53□□□□□ -0.4
COLCA2-202ENST00000526216 BRD7Q9NPI1 651 aa12.53□□□□□ -0.4
COLCA2-202ENST00000526216 OR52A1Q9UKL2 312 aa12.53□□□□□ -0.4
COLCA2-202ENST00000526216 COL6A6A6NMZ7 2263 aa12.52□□□□□ -0.4
COLCA2-202ENST00000526216 TMEM269A0A1B0GVZ9 245 aa12.52□□□□□ -0.41
COLCA2-202ENST00000526216 LOC110117498-PIK3R3F6TDL0 507 aa12.52□□□□□ -0.41
COLCA2-202ENST00000526216 SC5DO75845 299 aa12.52□□□□□ -0.41
COLCA2-202ENST00000526216 AGFG2O95081 481 aa12.52□□□□□ -0.41
COLCA2-202ENST00000526216 ATE1O95260 518 aa12.52□□□□□ -0.41
COLCA2-202ENST00000526216 TTRP02766 147 aa12.52□□□□□ -0.41
COLCA2-202ENST00000526216 CELA3BP08861 270 aa12.52□□□□□ -0.41
COLCA2-202ENST00000526216 ACSM4P0C7M7 580 aa12.52□□□□□ -0.41
COLCA2-202ENST00000526216 CD53P19397 219 aa12.52□□□□□ -0.41
COLCA2-202ENST00000526216 PSMB1P20618 241 aaKnown RBP12.52□□□□□ -0.41
COLCA2-202ENST00000526216 APEX1P27695 318 aaKnown RBP12.52□□□□□ -0.41
COLCA2-202ENST00000526216 ARR3P36575 388 aa12.52□□□□□ -0.41
COLCA2-202ENST00000526216 TMBIM6P55061 237 aa12.52□□□□□ -0.41
COLCA2-202ENST00000526216 NCS1P62166 190 aa12.52□□□□□ -0.41
COLCA2-202ENST00000526216 GALK2Q01415 458 aa12.52□□□□□ -0.41
COLCA2-202ENST00000526216 TAF13Q15543 124 aa12.52□□□□□ -0.41
COLCA2-202ENST00000526216 ZNF829Q3KNS6 432 aaPredicted RBP12.52□□□□□ -0.41
COLCA2-202ENST00000526216 TMEM53Q6P2H8 277 aa12.52□□□□□ -0.41
COLCA2-202ENST00000526216 RDH10Q8IZV5 341 aa12.52□□□□□ -0.41
COLCA2-202ENST00000526216 ZNF843Q8N446 348 aa12.52□□□□□ -0.41
COLCA2-202ENST00000526216 ZNF283Q8N7M2 679 aa12.52□□□□□ -0.41
COLCA2-202ENST00000526216 OR8B12Q8NGG6 310 aa12.52□□□□□ -0.41
COLCA2-202ENST00000526216 ZNF420Q8TAQ5 688 aaPredicted RBP12.52□□□□□ -0.41
COLCA2-202ENST00000526216 HAVCR2Q8TDQ0 301 aa12.52□□□□□ -0.41
COLCA2-202ENST00000526216 CHCHD6Q9BRQ6 235 aa12.52□□□□□ -0.41
COLCA2-202ENST00000526216 PBOV1Q9GZY1 135 aa12.52□□□□□ -0.41
COLCA2-202ENST00000526216 OCEL1Q9H607 264 aa12.52□□□□□ -0.41
COLCA2-202ENST00000526216 NIPAL2Q9H841 368 aa12.52□□□□□ -0.41
COLCA2-202ENST00000526216 GALNT8Q9NY28 637 aa12.52□□□□□ -0.41
COLCA2-202ENST00000526216 RSL24D1Q9UHA3 163 aaKnown RBP12.52□□□□□ -0.41
COLCA2-202ENST00000526216 NUFIP1Q9UHK0 495 aaKnown RBP12.52□□□□□ -0.41
COLCA2-202ENST00000526216 STUB1Q9UNE7 303 aa12.52□□□□□ -0.41
COLCA2-202ENST00000526216 POLEQ07864 2286 aa12.52□□□□□ -0.41
COLCA2-202ENST00000526216 LOC100506127A0A0U1RQW1 187 aa12.51□□□□□ -0.41
COLCA2-202ENST00000526216 CCDC160A6NGH7 325 aa12.51□□□□□ -0.41
COLCA2-202ENST00000526216 TRIM64BA6NI03 449 aa12.51□□□□□ -0.41
COLCA2-202ENST00000526216 OR5H1A6NKK0 313 aa12.51□□□□□ -0.41
COLCA2-202ENST00000526216 F5H5K5 113 aa12.51□□□□□ -0.41
COLCA2-202ENST00000526216 M0R135 149 aa12.51□□□□□ -0.41
COLCA2-202ENST00000526216 GABRPO00591 440 aa12.51□□□□□ -0.41
COLCA2-202ENST00000526216 AIREO43918 545 aa12.51□□□□□ -0.41
COLCA2-202ENST00000526216 COX5BP10606 129 aa12.51□□□□□ -0.41
COLCA2-202ENST00000526216 CCL2P13500 99 aa12.51□□□□□ -0.41
COLCA2-202ENST00000526216 HOXB1P14653 301 aaPredicted RBP12.51□□□□□ -0.41
COLCA2-202ENST00000526216 ZNF14P17017 642 aaPredicted RBP12.51□□□□□ -0.41
COLCA2-202ENST00000526216 VBP1P61758 197 aa12.51□□□□□ -0.41
COLCA2-202ENST00000526216 ECH1Q13011 328 aa12.51□□□□□ -0.41
COLCA2-202ENST00000526216 SPCS2Q15005 226 aa12.51□□□□□ -0.41
COLCA2-202ENST00000526216 GSG1Q2KHT4 349 aa12.51□□□□□ -0.41
COLCA2-202ENST00000526216 ODF4Q2M2E3 257 aa12.51□□□□□ -0.41
COLCA2-202ENST00000526216 SEZ6L2Q6UXD5 910 aa12.51□□□□□ -0.41
COLCA2-202ENST00000526216 C22orf34Q6ZV56 151 aa12.51□□□□□ -0.41
COLCA2-202ENST00000526216 DPPA2Q7Z7J5 298 aa12.51□□□□□ -0.41
COLCA2-202ENST00000526216 ELMOD2Q8IZ81 293 aa12.51□□□□□ -0.41
COLCA2-202ENST00000526216 C17orf78Q8N4C9 275 aa12.51□□□□□ -0.41
COLCA2-202ENST00000526216 PAQR4Q8N4S7 273 aaPredicted RBP12.51□□□□□ -0.41
COLCA2-202ENST00000526216 ABHD4Q8TB40 342 aa12.51□□□□□ -0.41
COLCA2-202ENST00000526216 RAB2BQ8WUD1 216 aa12.51□□□□□ -0.41
COLCA2-202ENST00000526216 S100PBPQ96BU1 408 aa12.51□□□□□ -0.41
COLCA2-202ENST00000526216 DGCR14Q96DF8 476 aaKnown RBP12.51□□□□□ -0.41
COLCA2-202ENST00000526216 ZNF799Q96GE5 643 aa12.51□□□□□ -0.41
COLCA2-202ENST00000526216 POM121L2Q96KW2 1035 aa12.51□□□□□ -0.41
COLCA2-202ENST00000526216 SOX7Q9BT81 388 aa12.51□□□□□ -0.41
COLCA2-202ENST00000526216 HDHD5Q9BXW7 423 aa12.51□□□□□ -0.41
COLCA2-202ENST00000526216 PPIL3Q9H2H8 161 aaKnown RBP12.51□□□□□ -0.41
COLCA2-202ENST00000526216 TXNL4BQ9NX01 149 aaKnown RBP12.51□□□□□ -0.41
COLCA2-202ENST00000526216 ATPIF1Q9UII2 106 aa12.51□□□□□ -0.41
COLCA2-202ENST00000526216 GTF2A1LQ9UNN4 478 aa12.51□□□□□ -0.41
COLCA2-202ENST00000526216 SLC25A15Q9Y619 301 aa12.51□□□□□ -0.41
COLCA2-202ENST00000526216 TRBV5-5A0A0J9YX44 114 aa12.5□□□□□ -0.41
COLCA2-202ENST00000526216 A0A1B0GTI1 187 aa12.5□□□□□ -0.41
COLCA2-202ENST00000526216 TRDV1A0A1B0GX56 115 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms