RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 GGTA1PQ4G0N0 100 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 CT45A2Q5DJT8 189 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 KLF17Q5JT82 389 aaPredicted RBP1.17□□□□□ -2.22
CD44-212ENST00000524922 RNASEH2BQ5TBB1 312 aaKnown RBP1.17□□□□□ -2.22
CD44-212ENST00000524922 RAET1LQ5VY80 246 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 RNLSQ5VYX0 342 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 ANKRD22Q5VYY1 191 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 LIPJQ5W064 366 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 HIST2H2AA3Q6FI13 130 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 FAHD2BQ6P2I3 314 aaPredicted RBP1.17□□□□□ -2.22
CD44-212ENST00000524922 REG3GQ6UW15 175 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 NHLRC1Q6VVB1 395 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 PP632Q6XCG6 107 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 C1orf122Q6ZSJ8 110 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 FCRLAQ7L513 359 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 LRRC70Q7Z2Q7 622 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 PAGE2Q7Z2X7 111 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 ZER1Q7Z7L7 766 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 KIAA1328Q86T90 577 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 YRDCQ86U90 279 aaKnown RBP1.17□□□□□ -2.22
CD44-212ENST00000524922 LYPD6Q86Y78 171 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 CREBRFQ8IUR6 639 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 ZBED8Q8IZ13 594 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 PARP8Q8N3A8 854 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 OTUD6BQ8N6M0 293 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 ZNF283Q8N7M2 679 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 SIGLECL1Q8N7X8 197 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 PRELID2Q8N945 189 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 ACOT4Q8N9L9 421 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 SNX31Q8N9S9 440 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 WDR31Q8NA23 367 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 SLC37A3Q8NCC5 494 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 CSNK1G2-AS1Q8NCQ2 148 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 NEK11Q8NG66 645 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 OR8K1Q8NGG5 319 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 LKAAEAR1Q8TD35 194 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 ADAMTS16Q8TE57 1224 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 ZFP90Q8TF47 636 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 MAIP1Q8WWC4 291 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 CTNNBL1Q8WYA6 563 aaPredicted RBP1.17□□□□□ -2.22
CD44-212ENST00000524922 ST8SIA1Q92185 356 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 ZNF75CPQ92670 426 aaPredicted RBP1.17□□□□□ -2.22
CD44-212ENST00000524922 SLC35B4Q969S0 331 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 NEIL2Q969S2 332 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 C11orf52Q96A22 123 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 ISOC1Q96CN7 298 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 ZHX1-C8orf76Q96EF9 292 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 CMTM7Q96FZ5 175 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 FAHD2AQ96GK7 314 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 RUNDC3BQ96NL0 473 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 NAP1L5Q96NT1 182 aaPredicted RBP1.17□□□□□ -2.22
CD44-212ENST00000524922 OR4K3Q96R72 315 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 TBX15Q96SF7 602 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 ATF6BQ99941 703 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 KCNS3Q9BQ31 491 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 CHCHD5Q9BSY4 110 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 ACAT2Q9BWD1 397 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 MS4A8Q9BY19 250 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 IQCGQ9H095 443 aaKnown RBP1.17□□□□□ -2.22
CD44-212ENST00000524922 NXF5Q9H1B4 397 aaKnown RBP1.17□□□□□ -2.22
CD44-212ENST00000524922 CCDC68Q9H2F9 335 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 GOLPH3LQ9H4A5 285 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 CLSTN2Q9H4D0 955 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 COQ10BQ9H8M1 238 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 EDA2RQ9HAV5 297 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 LPAR2Q9HBW0 351 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 EXOSC3Q9NQT5 275 aaKnown RBP1.17□□□□□ -2.22
CD44-212ENST00000524922 HOMER3Q9NSC5 361 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 ZNF275Q9NSD4 429 aaPredicted RBP1.17□□□□□ -2.22
CD44-212ENST00000524922 IARS2Q9NSE4 1012 aaKnown RBP1.17□□□□□ -2.22
CD44-212ENST00000524922 TAS2R13Q9NYV9 303 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 TAS2R9Q9NYW1 312 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 BFARQ9NZS9 450 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 ZNF581Q9P0T4 197 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 SEC14L4Q9UDX3 406 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 OR5V1Q9UGF6 321 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 SLC7A8Q9UHI5 535 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 GLS2Q9UI32 602 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 PCDHGB4Q9UN71 923 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 ACOT9Q9Y305 439 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 ZNF337Q9Y3M9 751 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 MAB21L2Q9Y586 359 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 PRR14LQ5THK1 2151 aa1.17□□□□□ -2.22
CD44-212ENST00000524922 NPIPA5A0A0B4J1W7 369 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 IGHV2OR16-5A0A0B4J2B6 119 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 IGHV2-70DA0A0C4DH43 119 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 IGHV1-69-2A0A0G2JMI3 117 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 A0A1W2PPK0 400 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 A0A1W2PPM1 405 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 TMEM129A0AVI4 362 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 LRP5LA4QPB2 252 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 PGPEP1LA6NFU8 196 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 ZNF860A6NHJ4 632 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 ANKDD1BA6NHY2 528 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 ZNF716A6NP11 495 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 C4orf51C9J302 202 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 NPIPA7E9PJI5 369 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 ATP6V1G2-DDX39BF2Z307 99 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 G3V3Y1 287 aa1.16□□□□□ -2.22
CD44-212ENST00000524922 H0YHG0 523 aa1.16□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms