RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 UXTQ9UBK9 157 aaPredicted RBP2.29□□□□□ -2.04
HMGN1P28-201ENST00000521340 PSG8Q9UQ74 426 aa2.29□□□□□ -2.04
HMGN1P28-201ENST00000521340 TDRD6O60522 2096 aaKnown RBP2.29□□□□□ -2.04
HMGN1P28-201ENST00000521340 TET2Q6N021 2002 aaPredicted RBP2.29□□□□□ -2.04
HMGN1P28-201ENST00000521340 MYH11P35749 1972 aa2.29□□□□□ -2.04
HMGN1P28-201ENST00000521340 MTCL1Q9Y4B5 1905 aaKnown RBP2.29□□□□□ -2.04
HMGN1P28-201ENST00000521340 COL14A1Q05707 1796 aaKnown RBP2.28□□□□□ -2.04
HMGN1P28-201ENST00000521340 DUOX1Q9NRD9 1551 aa2.28□□□□□ -2.04
HMGN1P28-201ENST00000521340 ATRNO75882 1429 aa2.28□□□□□ -2.04
HMGN1P28-201ENST00000521340 DCCP43146 1447 aa2.28□□□□□ -2.04
HMGN1P28-201ENST00000521340 TNS2Q63HR2 1409 aa2.28□□□□□ -2.04
HMGN1P28-201ENST00000521340 PALLDQ8WX93 1383 aa2.28□□□□□ -2.04
HMGN1P28-201ENST00000521340 ELP1O95163 1332 aa2.28□□□□□ -2.04
HMGN1P28-201ENST00000521340 GJE1A6NN92 205 aa2.28□□□□□ -2.04
HMGN1P28-201ENST00000521340 NCBP2LA6PVI3 153 aaKnown RBP2.28□□□□□ -2.04
HMGN1P28-201ENST00000521340 HIDE1A8MVS5 230 aa2.28□□□□□ -2.04
HMGN1P28-201ENST00000521340 F6UB75 175 aa2.28□□□□□ -2.04
HMGN1P28-201ENST00000521340 SMKR1H3BMG3 65 aa2.28□□□□□ -2.04
HMGN1P28-201ENST00000521340 BCKDKO14874 412 aa2.28□□□□□ -2.04
HMGN1P28-201ENST00000521340 FCN3O75636 299 aa2.28□□□□□ -2.04
HMGN1P28-201ENST00000521340 SCELO95171 688 aa2.28□□□□□ -2.04
HMGN1P28-201ENST00000521340 AIFM1O95831 613 aa2.28□□□□□ -2.04
HMGN1P28-201ENST00000521340 SNAI1O95863 264 aaPredicted RBP2.28□□□□□ -2.04
HMGN1P28-201ENST00000521340 OTCP00480 354 aa2.28□□□□□ -2.04
HMGN1P28-201ENST00000521340 GNAO1P09471 354 aa2.28□□□□□ -2.04
HMGN1P28-201ENST00000521340 CLTAP09496 248 aa2.28□□□□□ -2.04
HMGN1P28-201ENST00000521340 CSF3P09919 207 aa2.28□□□□□ -2.04
HMGN1P28-201ENST00000521340 CT45A6P0DMU7 189 aa2.28□□□□□ -2.04
HMGN1P28-201ENST00000521340 CT45A5P0DMU8 189 aa2.28□□□□□ -2.04
HMGN1P28-201ENST00000521340 CT45A7P0DMV0 189 aa2.28□□□□□ -2.04
HMGN1P28-201ENST00000521340 CD1EP15812 388 aa2.28□□□□□ -2.04
HMGN1P28-201ENST00000521340 MGMTP16455 207 aa2.28□□□□□ -2.04
HMGN1P28-201ENST00000521340 AK4P27144 223 aaPredicted RBP2.28□□□□□ -2.04
HMGN1P28-201ENST00000521340 TNFSF9P41273 254 aa2.28□□□□□ -2.04
HMGN1P28-201ENST00000521340 SLC1A2P43004 574 aa2.28□□□□□ -2.04
HMGN1P28-201ENST00000521340 UBE2MP61081 183 aaKnown RBP2.28□□□□□ -2.04
HMGN1P28-201ENST00000521340 NUTF2P61970 127 aaKnown RBP2.28□□□□□ -2.04
HMGN1P28-201ENST00000521340 SEMG2Q02383 582 aa2.28□□□□□ -2.04
HMGN1P28-201ENST00000521340 RAD51Q06609 339 aa2.28□□□□□ -2.04
HMGN1P28-201ENST00000521340 TRAM2Q15035 370 aa2.28□□□□□ -2.04
HMGN1P28-201ENST00000521340 PSG5Q15238 335 aa2.28□□□□□ -2.04
HMGN1P28-201ENST00000521340 KCTD19Q17RG1 926 aaPredicted RBP2.28□□□□□ -2.04
HMGN1P28-201ENST00000521340 RPEL1Q2QD12 228 aa2.28□□□□□ -2.04
HMGN1P28-201ENST00000521340 CT45A1Q5HYN5 189 aa2.28□□□□□ -2.04
HMGN1P28-201ENST00000521340 PLCXD3Q63HM9 321 aa2.28□□□□□ -2.04
HMGN1P28-201ENST00000521340 SPESP1Q6UW49 350 aa2.28□□□□□ -2.04
HMGN1P28-201ENST00000521340 C6orf89Q6UWU4 347 aa2.28□□□□□ -2.04
HMGN1P28-201ENST00000521340 NPSR1Q6W5P4 371 aa2.28□□□□□ -2.04
HMGN1P28-201ENST00000521340 ASCL4Q6XD76 172 aa2.28□□□□□ -2.04
HMGN1P28-201ENST00000521340 TEX43Q6ZNM6 134 aa2.28□□□□□ -2.04
HMGN1P28-201ENST00000521340 LINC00336Q6ZUF6 198 aa2.28□□□□□ -2.04
HMGN1P28-201ENST00000521340 MTERF4Q7Z6M4 381 aaKnown RBP2.28□□□□□ -2.04
HMGN1P28-201ENST00000521340 NPWQ8N729 165 aa2.28□□□□□ -2.04
HMGN1P28-201ENST00000521340 C15orf56Q8N910 161 aa2.28□□□□□ -2.04
HMGN1P28-201ENST00000521340 CT45A3Q8NHU0 189 aa2.28□□□□□ -2.04
HMGN1P28-201ENST00000521340 FANK1Q8TC84 345 aa2.28□□□□□ -2.04
HMGN1P28-201ENST00000521340 ANP32BQ92688 251 aaKnown RBP2.28□□□□□ -2.04
HMGN1P28-201ENST00000521340 RDH5Q92781 318 aa2.28□□□□□ -2.04
HMGN1P28-201ENST00000521340 MAGEB18Q96M61 343 aa2.28□□□□□ -2.04
HMGN1P28-201ENST00000521340 GABARAPL3Q9BY60 117 aa2.28□□□□□ -2.04
HMGN1P28-201ENST00000521340 UPF3BQ9BZI7 483 aaKnown RBP2.28□□□□□ -2.04
HMGN1P28-201ENST00000521340 ZYG11BQ9C0D3 744 aa2.28□□□□□ -2.04
HMGN1P28-201ENST00000521340 FANCEQ9HB96 536 aa2.28□□□□□ -2.04
HMGN1P28-201ENST00000521340 DMAP1Q9NPF5 467 aaPredicted RBP2.28□□□□□ -2.04
HMGN1P28-201ENST00000521340 HRASLS2Q9NWW9 162 aa2.28□□□□□ -2.04
HMGN1P28-201ENST00000521340 CCDC59Q9P031 241 aaKnown RBP2.28□□□□□ -2.04
HMGN1P28-201ENST00000521340 MRPS18BQ9Y676 258 aaKnown RBP2.28□□□□□ -2.04
HMGN1P28-201ENST00000521340 SMAD5-AS1Q9Y6J3 95 aa2.28□□□□□ -2.04
HMGN1P28-201ENST00000521340 LRRC37AA6NMS7 1700 aa2.28□□□□□ -2.05
HMGN1P28-201ENST00000521340 BAZ2BQ9UIF8 2168 aaKnown RBP2.27□□□□□ -2.05
HMGN1P28-201ENST00000521340 BCL9LQ86UU0 1499 aa2.27□□□□□ -2.05
HMGN1P28-201ENST00000521340 RIC1Q4ADV7 1423 aa2.27□□□□□ -2.05
HMGN1P28-201ENST00000521340 CARMIL3Q8ND23 1372 aa2.27□□□□□ -2.05
HMGN1P28-201ENST00000521340 UBN2Q6ZU65 1347 aa2.27□□□□□ -2.05
HMGN1P28-201ENST00000521340 IGHV3-64DA0A0J9YX35 117 aa2.27□□□□□ -2.05
HMGN1P28-201ENST00000521340 TRDMT1O14717 391 aaKnown RBP2.27□□□□□ -2.05
HMGN1P28-201ENST00000521340 ERI3O43414 337 aaKnown RBP2.27□□□□□ -2.05
HMGN1P28-201ENST00000521340 FLOT1O75955 427 aa2.27□□□□□ -2.05
HMGN1P28-201ENST00000521340 CCNB2O95067 398 aa2.27□□□□□ -2.05
HMGN1P28-201ENST00000521340 INSP01308 110 aa2.27□□□□□ -2.05
HMGN1P28-201ENST00000521340 HLA-HP01893 362 aa2.27□□□□□ -2.05
HMGN1P28-201ENST00000521340 BGLAPP02818 100 aa2.27□□□□□ -2.05
HMGN1P28-201ENST00000521340 IGHV4-34P06331 123 aa2.27□□□□□ -2.05
HMGN1P28-201ENST00000521340 ACSM4P0C7M7 580 aa2.27□□□□□ -2.05
HMGN1P28-201ENST00000521340 UBCP0CG48 685 aaKnown RBP2.27□□□□□ -2.05
HMGN1P28-201ENST00000521340 ZNF30P17039 623 aa2.27□□□□□ -2.05
HMGN1P28-201ENST00000521340 ZNF138P52744 262 aa2.27□□□□□ -2.05
HMGN1P28-201ENST00000521340 SP4Q02446 784 aa2.27□□□□□ -2.05
HMGN1P28-201ENST00000521340 CKAP4Q07065 602 aaKnown RBP2.27□□□□□ -2.05
HMGN1P28-201ENST00000521340 ARFRP1Q13795 201 aa2.27□□□□□ -2.05
HMGN1P28-201ENST00000521340 NCF4Q15080 339 aa2.27□□□□□ -2.05
HMGN1P28-201ENST00000521340 OR7A5Q15622 319 aa2.27□□□□□ -2.05
HMGN1P28-201ENST00000521340 FAM83EQ2M2I3 478 aa2.27□□□□□ -2.05
HMGN1P28-201ENST00000521340 RSBN1Q5VWQ0 802 aaPredicted RBP2.27□□□□□ -2.05
HMGN1P28-201ENST00000521340 ANKRD22Q5VYY1 191 aa2.27□□□□□ -2.05
HMGN1P28-201ENST00000521340 TWF2Q6IBS0 349 aaKnown RBP2.27□□□□□ -2.05
HMGN1P28-201ENST00000521340 CCDC73Q6ZRK6 1079 aa2.27□□□□□ -2.05
HMGN1P28-201ENST00000521340 OR2A1Q8NGT9 310 aa2.27□□□□□ -2.05
HMGN1P28-201ENST00000521340 LKAAEAR1Q8TD35 194 aa2.27□□□□□ -2.05
HMGN1P28-201ENST00000521340 SDR42E1Q8WUS8 393 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms