RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 ZNF729A6NN14 1252 aaPredicted RBP2.52□□□□□ -2.01
HMGB1P41-201ENST00000520234 A8MT66 165 aa2.52□□□□□ -2.01
HMGB1P41-201ENST00000520234 G3V2T6 193 aa2.52□□□□□ -2.01
HMGB1P41-201ENST00000520234 SMLR1H3BR10 107 aa2.52□□□□□ -2.01
HMGB1P41-201ENST00000520234 GFYI3L273 518 aa2.52□□□□□ -2.01
HMGB1P41-201ENST00000520234 SGK494L7N484 410 aa2.52□□□□□ -2.01
HMGB1P41-201ENST00000520234 SH2D1BO14796 132 aa2.52□□□□□ -2.01
HMGB1P41-201ENST00000520234 BCKDKO14874 412 aa2.52□□□□□ -2.01
HMGB1P41-201ENST00000520234 MYL12BO14950 172 aa2.52□□□□□ -2.01
HMGB1P41-201ENST00000520234 STX7O15400 261 aaKnown RBP2.52□□□□□ -2.01
HMGB1P41-201ENST00000520234 FABP7O15540 132 aa2.52□□□□□ -2.01
HMGB1P41-201ENST00000520234 SSX5O60225 188 aa2.52□□□□□ -2.01
HMGB1P41-201ENST00000520234 KERAO60938 352 aa2.52□□□□□ -2.01
HMGB1P41-201ENST00000520234 NUDT14O95848 222 aa2.52□□□□□ -2.01
HMGB1P41-201ENST00000520234 LALBAP00709 142 aa2.52□□□□□ -2.01
HMGB1P41-201ENST00000520234 IFNGP01579 166 aa2.52□□□□□ -2.01
HMGB1P41-201ENST00000520234 IGLV3-27P01718 113 aa2.52□□□□□ -2.01
HMGB1P41-201ENST00000520234 HLA-DQB2P05538 268 aa2.52□□□□□ -2.01
HMGB1P41-201ENST00000520234 GLAP06280 429 aa2.52□□□□□ -2.01
HMGB1P41-201ENST00000520234 FABP1P07148 127 aa2.52□□□□□ -2.01
HMGB1P41-201ENST00000520234 FBP1P09467 338 aa2.52□□□□□ -2.01
HMGB1P41-201ENST00000520234 ZDHHC11BP0C7U3 371 aa2.52□□□□□ -2.01
HMGB1P41-201ENST00000520234 HLA-EP13747 358 aa2.52□□□□□ -2.01
HMGB1P41-201ENST00000520234 NCF1P14598 390 aaPredicted RBP2.52□□□□□ -2.01
HMGB1P41-201ENST00000520234 MUC1P15941 1255 aaPredicted RBP2.52□□□□□ -2.01
HMGB1P41-201ENST00000520234 NCK1P16333 377 aa2.52□□□□□ -2.01
HMGB1P41-201ENST00000520234 ZNF3P17036 446 aa2.52□□□□□ -2.01
HMGB1P41-201ENST00000520234 MYL12AP19105 171 aa2.52□□□□□ -2.01
HMGB1P41-201ENST00000520234 RPS3P23396 243 aaKnown RBP eCLIP2.52□□□□□ -2.01
HMGB1P41-201ENST00000520234 SLC6A1P30531 599 aa2.52□□□□□ -2.01
HMGB1P41-201ENST00000520234 FMO3P31513 532 aa2.52□□□□□ -2.01
HMGB1P41-201ENST00000520234 BTCP35070 178 aa2.52□□□□□ -2.01
HMGB1P41-201ENST00000520234 NUP62P37198 522 aaPredicted RBP2.52□□□□□ -2.01
HMGB1P41-201ENST00000520234 ACTR1BP42025 376 aa2.52□□□□□ -2.01
HMGB1P41-201ENST00000520234 SLC1A2P43004 574 aa2.52□□□□□ -2.01
HMGB1P41-201ENST00000520234 CRYBB2P43320 205 aa2.52□□□□□ -2.01
HMGB1P41-201ENST00000520234 DAPP51397 102 aa2.52□□□□□ -2.01
HMGB1P41-201ENST00000520234 P2RY4P51582 365 aa2.52□□□□□ -2.01
HMGB1P41-201ENST00000520234 RAB25P57735 213 aa2.52□□□□□ -2.01
HMGB1P41-201ENST00000520234 ACTR1AP61163 376 aa2.52□□□□□ -2.01
HMGB1P41-201ENST00000520234 HERVK_113P63132 956 aa2.52□□□□□ -2.01
HMGB1P41-201ENST00000520234 MRPS6P82932 125 aaKnown RBP2.52□□□□□ -2.01
HMGB1P41-201ENST00000520234 NAAAQ02083 359 aa2.52□□□□□ -2.01
HMGB1P41-201ENST00000520234 HSF2Q03933 536 aa2.52□□□□□ -2.01
HMGB1P41-201ENST00000520234 ILKQ13418 452 aa2.52□□□□□ -2.01
HMGB1P41-201ENST00000520234 CAPRIN1Q14444 709 aaKnown RBP2.52□□□□□ -2.01
HMGB1P41-201ENST00000520234 GRB7Q14451 532 aa2.52□□□□□ -2.01
HMGB1P41-201ENST00000520234 IHHQ14623 411 aa2.52□□□□□ -2.01
HMGB1P41-201ENST00000520234 LASP1Q14847 261 aaKnown RBP2.52□□□□□ -2.01
HMGB1P41-201ENST00000520234 ANGPT1Q15389 498 aa2.52□□□□□ -2.01
HMGB1P41-201ENST00000520234 CCL15Q16663 113 aa2.52□□□□□ -2.01
HMGB1P41-201ENST00000520234 C14orf28Q4W4Y0 310 aa2.52□□□□□ -2.01
HMGB1P41-201ENST00000520234 XKR7Q5GH72 579 aa2.52□□□□□ -2.01
HMGB1P41-201ENST00000520234 CDKL4Q5MAI5 379 aa2.52□□□□□ -2.01
HMGB1P41-201ENST00000520234 SPANXN2Q5MJ10 180 aa2.52□□□□□ -2.01
HMGB1P41-201ENST00000520234 MARC1Q5VT66 337 aa2.52□□□□□ -2.01
HMGB1P41-201ENST00000520234 FAM219BQ5XKK7 198 aa2.52□□□□□ -2.01
HMGB1P41-201ENST00000520234 ETFRF1Q6IPR1 90 aa2.52□□□□□ -2.01
HMGB1P41-201ENST00000520234 TSEN54Q7Z6J9 526 aaKnown RBP2.52□□□□□ -2.01
HMGB1P41-201ENST00000520234 MSRB3Q8IXL7 192 aa2.52□□□□□ -2.01
HMGB1P41-201ENST00000520234 ATPAF2Q8N5M1 289 aa2.52□□□□□ -2.01
HMGB1P41-201ENST00000520234 MS4A15Q8N5U1 240 aa2.52□□□□□ -2.01
HMGB1P41-201ENST00000520234 ZNF491Q8N8L2 437 aa2.52□□□□□ -2.01
HMGB1P41-201ENST00000520234 OR11H7Q8NGC8 314 aa2.52□□□□□ -2.01
HMGB1P41-201ENST00000520234 OR8H1Q8NGG4 311 aa2.52□□□□□ -2.01
HMGB1P41-201ENST00000520234 OR8D4Q8NGM9 314 aa2.52□□□□□ -2.01
HMGB1P41-201ENST00000520234 OR5K1Q8NHB7 308 aa2.52□□□□□ -2.01
HMGB1P41-201ENST00000520234 TYMSOSQ8TAI1 123 aa2.52□□□□□ -2.01
HMGB1P41-201ENST00000520234 STAG3L4Q8TBR4 150 aa2.52□□□□□ -2.01
HMGB1P41-201ENST00000520234 UCN3Q969E3 161 aa2.52□□□□□ -2.01
HMGB1P41-201ENST00000520234 MYDGFQ969H8 173 aa2.52□□□□□ -2.01
HMGB1P41-201ENST00000520234 MYLPFQ96A32 169 aa2.52□□□□□ -2.01
HMGB1P41-201ENST00000520234 RAB7BQ96AH8 199 aa2.52□□□□□ -2.01
HMGB1P41-201ENST00000520234 CREB3L1Q96BA8 519 aa2.52□□□□□ -2.01
HMGB1P41-201ENST00000520234 MRPS24Q96EL2 167 aaKnown RBP2.52□□□□□ -2.01
HMGB1P41-201ENST00000520234 ITCHQ96J02 903 aa2.52□□□□□ -2.01
HMGB1P41-201ENST00000520234 CELF6Q96J87 481 aaKnown RBP2.52□□□□□ -2.01
HMGB1P41-201ENST00000520234 B3GALT6Q96L58 329 aa2.52□□□□□ -2.01
HMGB1P41-201ENST00000520234 TEX37Q96LM6 180 aa2.52□□□□□ -2.01
HMGB1P41-201ENST00000520234 TRIB3Q96RU7 358 aa2.52□□□□□ -2.01
HMGB1P41-201ENST00000520234 ATP6V0BQ99437 205 aa2.52□□□□□ -2.01
HMGB1P41-201ENST00000520234 TMEM175Q9BSA9 504 aa2.52□□□□□ -2.01
HMGB1P41-201ENST00000520234 FICDQ9BVA6 458 aa2.52□□□□□ -2.01
HMGB1P41-201ENST00000520234 C1QTNF6Q9BXI9 259 aa2.52□□□□□ -2.01
HMGB1P41-201ENST00000520234 ERVK-6Q9BXR3 956 aa2.52□□□□□ -2.01
HMGB1P41-201ENST00000520234 PRRG3Q9BZD7 231 aa2.52□□□□□ -2.01
HMGB1P41-201ENST00000520234 ZYG11BQ9C0D3 744 aa2.52□□□□□ -2.01
HMGB1P41-201ENST00000520234 DERL2Q9GZP9 239 aa2.52□□□□□ -2.01
HMGB1P41-201ENST00000520234 RACGAP1Q9H0H5 632 aa2.52□□□□□ -2.01
HMGB1P41-201ENST00000520234 OR51E2Q9H255 320 aa2.52□□□□□ -2.01
HMGB1P41-201ENST00000520234 OR51M1Q9H341 326 aa2.52□□□□□ -2.01
HMGB1P41-201ENST00000520234 POMKQ9H5K3 350 aa2.52□□□□□ -2.01
HMGB1P41-201ENST00000520234 RNF122Q9H9V4 155 aa2.52□□□□□ -2.01
HMGB1P41-201ENST00000520234 IL1RL2Q9HB29 575 aa2.52□□□□□ -2.01
HMGB1P41-201ENST00000520234 POLE3Q9NRF9 147 aa2.52□□□□□ -2.01
HMGB1P41-201ENST00000520234 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.52□□□□□ -2.01
HMGB1P41-201ENST00000520234 ZNF275Q9NSD4 429 aaPredicted RBP2.52□□□□□ -2.01
HMGB1P41-201ENST00000520234 CUTCQ9NTM9 273 aa2.52□□□□□ -2.01
HMGB1P41-201ENST00000520234 MCUBQ9NWR8 336 aa2.52□□□□□ -2.01
HMGB1P41-201ENST00000520234 HPF1Q9NWY4 346 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms