RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 B4GALT1P15291 398 aa4.07□□□□□ -1.76
SDCBP-207ENST00000520168 IL7RP16871 459 aa4.07□□□□□ -1.76
SDCBP-207ENST00000520168 SOAT1P35610 550 aa4.07□□□□□ -1.76
SDCBP-207ENST00000520168 VHLP40337 213 aa4.07□□□□□ -1.76
SDCBP-207ENST00000520168 ACAA2P42765 397 aaKnown RBP4.07□□□□□ -1.76
SDCBP-207ENST00000520168 IER3P46695 156 aa4.07□□□□□ -1.76
SDCBP-207ENST00000520168 MRPL19P49406 292 aaKnown RBP4.07□□□□□ -1.76
SDCBP-207ENST00000520168 NPY4RP50391 375 aa4.07□□□□□ -1.76
SDCBP-207ENST00000520168 FOXA1P55317 472 aa4.07□□□□□ -1.76
SDCBP-207ENST00000520168 RAB14P61106 215 aa4.07□□□□□ -1.76
SDCBP-207ENST00000520168 STX1BP61266 288 aa4.07□□□□□ -1.76
SDCBP-207ENST00000520168 SEC61A1P61619 476 aaKnown RBP4.07□□□□□ -1.76
SDCBP-207ENST00000520168 TSPAN5P62079 268 aa4.07□□□□□ -1.76
SDCBP-207ENST00000520168 RPL38P63173 70 aaKnown RBP4.07□□□□□ -1.76
SDCBP-207ENST00000520168 EMX1Q04741 257 aaPredicted RBP4.07□□□□□ -1.76
SDCBP-207ENST00000520168 RAB39AQ14964 217 aa4.07□□□□□ -1.76
SDCBP-207ENST00000520168 MFSD13AQ14CX5 517 aa4.07□□□□□ -1.76
SDCBP-207ENST00000520168 NDUFA5Q16718 116 aa4.07□□□□□ -1.76
SDCBP-207ENST00000520168 SMU1Q2TAY7 513 aa4.07□□□□□ -1.76
SDCBP-207ENST00000520168 UGT3A2Q3SY77 523 aa4.07□□□□□ -1.76
SDCBP-207ENST00000520168 SLC36A2Q495M3 483 aa4.07□□□□□ -1.76
SDCBP-207ENST00000520168 C1orf146Q5VVC0 180 aa4.07□□□□□ -1.76
SDCBP-207ENST00000520168 MBNL2Q5VZF2 373 aaKnown RBP4.07□□□□□ -1.76
SDCBP-207ENST00000520168 CLEC6AQ6EIG7 209 aa4.07□□□□□ -1.76
SDCBP-207ENST00000520168 ZFP1Q6P2D0 407 aa4.07□□□□□ -1.76
SDCBP-207ENST00000520168 HACD2Q6Y1H2 254 aa4.07□□□□□ -1.76
SDCBP-207ENST00000520168 C6orf120Q7Z4R8 191 aa4.07□□□□□ -1.76
SDCBP-207ENST00000520168 AKAP14Q86UN6 197 aa4.07□□□□□ -1.76
SDCBP-207ENST00000520168 ZNF584Q8IVC4 421 aa4.07□□□□□ -1.76
SDCBP-207ENST00000520168 UEVLDQ8IX04 471 aa4.07□□□□□ -1.76
SDCBP-207ENST00000520168 C20orf196Q8IYI0 205 aa4.07□□□□□ -1.76
SDCBP-207ENST00000520168 DEFB107AQ8IZN7 70 aa4.07□□□□□ -1.76
SDCBP-207ENST00000520168 PGAM4Q8N0Y7 254 aa4.07□□□□□ -1.76
SDCBP-207ENST00000520168 ADPRHL1Q8NDY3 354 aa4.07□□□□□ -1.76
SDCBP-207ENST00000520168 OR4F17Q8NGA8 305 aa4.07□□□□□ -1.76
SDCBP-207ENST00000520168 OR6S1Q8NH40 331 aa4.07□□□□□ -1.76
SDCBP-207ENST00000520168 CLHC1Q8NHS4 586 aa4.07□□□□□ -1.76
SDCBP-207ENST00000520168 PNPT1Q8TCS8 783 aaKnown RBP4.07□□□□□ -1.76
SDCBP-207ENST00000520168 NPRL2Q8WTW4 380 aa4.07□□□□□ -1.76
SDCBP-207ENST00000520168 CFHR4Q92496 578 aa4.07□□□□□ -1.76
SDCBP-207ENST00000520168 DACT3Q96B18 629 aaPredicted RBP4.07□□□□□ -1.76
SDCBP-207ENST00000520168 ROPN1LQ96C74 230 aa4.07□□□□□ -1.76
SDCBP-207ENST00000520168 MARS2Q96GW9 593 aaKnown RBP4.07□□□□□ -1.76
SDCBP-207ENST00000520168 SAMD8Q96LT4 415 aa4.07□□□□□ -1.76
SDCBP-207ENST00000520168 CMTM3Q96MX0 182 aa4.07□□□□□ -1.76
SDCBP-207ENST00000520168 TSPAN32Q96QS1 320 aa4.07□□□□□ -1.76
SDCBP-207ENST00000520168 OR4F4Q96R69 305 aa4.07□□□□□ -1.76
SDCBP-207ENST00000520168 NR1H4Q96RI1 486 aaPredicted RBP4.07□□□□□ -1.76
SDCBP-207ENST00000520168 ATP6V0BQ99437 205 aa4.07□□□□□ -1.76
SDCBP-207ENST00000520168 HOPXQ9BPY8 73 aaPredicted RBP4.07□□□□□ -1.76
SDCBP-207ENST00000520168 BCL7BQ9BQE9 202 aa4.07□□□□□ -1.76
SDCBP-207ENST00000520168 ULBP2Q9BZM5 246 aa4.07□□□□□ -1.76
SDCBP-207ENST00000520168 DPY30Q9C005 99 aa4.07□□□□□ -1.76
SDCBP-207ENST00000520168 RAD21L1Q9H4I0 556 aa4.07□□□□□ -1.76
SDCBP-207ENST00000520168 C12orf10Q9HB07 376 aa4.07□□□□□ -1.76
SDCBP-207ENST00000520168 SNTG1Q9NSN8 517 aa4.07□□□□□ -1.76
SDCBP-207ENST00000520168 TMEM106BQ9NUM4 274 aa4.07□□□□□ -1.76
SDCBP-207ENST00000520168 GID8Q9NWU2 228 aa4.07□□□□□ -1.76
SDCBP-207ENST00000520168 ZNF224Q9NZL3 707 aa4.07□□□□□ -1.76
SDCBP-207ENST00000520168 NKX1-2Q9UD57 310 aaPredicted RBP4.07□□□□□ -1.76
SDCBP-207ENST00000520168 VPREB3Q9UKI3 123 aa4.07□□□□□ -1.76
SDCBP-207ENST00000520168 CCL27Q9Y4X3 112 aa4.07□□□□□ -1.76
SDCBP-207ENST00000520168 ZNF816-ZNF321PA0A0X1KG74 233 aa4.06□□□□□ -1.76
SDCBP-207ENST00000520168 TMEM247A6NEH6 219 aa4.06□□□□□ -1.76
SDCBP-207ENST00000520168 CEACAM18A8MTB9 384 aa4.06□□□□□ -1.76
SDCBP-207ENST00000520168 PHYHO14832 338 aa4.06□□□□□ -1.76
SDCBP-207ENST00000520168 PRODHO43272 600 aa4.06□□□□□ -1.76
SDCBP-207ENST00000520168 SPRY3O43610 288 aa4.06□□□□□ -1.76
SDCBP-207ENST00000520168 BCAS1O75363 584 aaPredicted RBP4.06□□□□□ -1.76
SDCBP-207ENST00000520168 KRT36O76013 467 aa4.06□□□□□ -1.76
SDCBP-207ENST00000520168 DUS4LO95620 317 aaKnown RBP4.06□□□□□ -1.76
SDCBP-207ENST00000520168 C6orf47O95873 294 aa4.06□□□□□ -1.76
SDCBP-207ENST00000520168 DBIP07108 87 aaKnown RBP4.06□□□□□ -1.76
SDCBP-207ENST00000520168 WNT2P09544 360 aa4.06□□□□□ -1.76
SDCBP-207ENST00000520168 LAMP1P11279 417 aa4.06□□□□□ -1.76
SDCBP-207ENST00000520168 ACADSP16219 412 aa4.06□□□□□ -1.76
SDCBP-207ENST00000520168 LBPP18428 481 aa4.06□□□□□ -1.76
SDCBP-207ENST00000520168 EFNA1P20827 205 aaPredicted RBP4.06□□□□□ -1.76
SDCBP-207ENST00000520168 CD247P20963 164 aa4.06□□□□□ -1.76
SDCBP-207ENST00000520168 PRPS1L1P21108 318 aa4.06□□□□□ -1.76
SDCBP-207ENST00000520168 RPS4Y1P22090 263 aaKnown RBP4.06□□□□□ -1.76
SDCBP-207ENST00000520168 TUBG1P23258 451 aa4.06□□□□□ -1.76
SDCBP-207ENST00000520168 APLNRP35414 380 aa4.06□□□□□ -1.76
SDCBP-207ENST00000520168 NUDT2P50583 147 aa4.06□□□□□ -1.76
SDCBP-207ENST00000520168 ANXA11P50995 505 aaKnown RBP4.06□□□□□ -1.76
SDCBP-207ENST00000520168 HBA1P69905 142 aa4.06□□□□□ -1.76
SDCBP-207ENST00000520168 TNFAIP6P98066 277 aaPredicted RBP4.06□□□□□ -1.76
SDCBP-207ENST00000520168 PLP2Q04941 152 aa4.06□□□□□ -1.76
SDCBP-207ENST00000520168 EGR3Q06889 387 aa4.06□□□□□ -1.76
SDCBP-207ENST00000520168 ZMYND11Q15326 602 aa4.06□□□□□ -1.76
SDCBP-207ENST00000520168 RFTN2Q52LD8 501 aaPredicted RBP4.06□□□□□ -1.76
SDCBP-207ENST00000520168 GPAT3Q53EU6 434 aa4.06□□□□□ -1.76
SDCBP-207ENST00000520168 AGKQ53H12 422 aa4.06□□□□□ -1.76
SDCBP-207ENST00000520168 XKR7Q5GH72 579 aa4.06□□□□□ -1.76
SDCBP-207ENST00000520168 COQ5Q5HYK3 327 aa4.06□□□□□ -1.76
SDCBP-207ENST00000520168 MRPL2Q5T653 305 aaKnown RBP4.06□□□□□ -1.76
SDCBP-207ENST00000520168 FAM69AQ5T7M9 428 aa4.06□□□□□ -1.76
SDCBP-207ENST00000520168 ATPAF1Q5TC12 328 aaPredicted RBP4.06□□□□□ -1.76
SDCBP-207ENST00000520168 CD276Q5ZPR3 534 aa4.06□□□□□ -1.76
SDCBP-207ENST00000520168 ZNF774Q6NX45 483 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms