RNA–Protein interactions for RNA: ENST00000519767.5

VEGFA-220, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-220ENST00000519767 OR5AS1Q8N127 324 aa21.33■■□□□ 1.01
VEGFA-220ENST00000519767 LINC00471Q8N535 108 aa21.33■■□□□ 1.01
VEGFA-220ENST00000519767 HCAR1Q9BXC0 346 aa21.33■■□□□ 1.01
VEGFA-220ENST00000519767 C1QTNF5Q9BXJ0 243 aa21.33■■□□□ 1.01
VEGFA-220ENST00000519767 RPRD1BQ9NQG5 326 aaKnown RBP21.33■■□□□ 1.01
VEGFA-220ENST00000519767 OPN4Q9UHM6 478 aa21.33■■□□□ 1.01
VEGFA-220ENST00000519767 TMEM178BH3BS89 294 aa21.32■■□□□ 1
VEGFA-220ENST00000519767 DCTN3O75935 186 aa21.32■■□□□ 1
VEGFA-220ENST00000519767 ADRA2CP18825 462 aa21.32■■□□□ 1
VEGFA-220ENST00000519767 ERFP50548 548 aa21.32■■□□□ 1
VEGFA-220ENST00000519767 ZMYND11Q15326 602 aa21.32■■□□□ 1
VEGFA-220ENST00000519767 RPL13AP3Q6NVV1 102 aa21.32■■□□□ 1
VEGFA-220ENST00000519767 ZDHHC21Q8IVQ6 265 aa21.32■■□□□ 1
VEGFA-220ENST00000519767 BPIFB2Q8N4F0 458 aa21.32■■□□□ 1
VEGFA-220ENST00000519767 SIGLEC11Q96RL6 698 aa21.32■■□□□ 1
VEGFA-220ENST00000519767 PITX2Q99697 317 aa21.32■■□□□ 1
VEGFA-220ENST00000519767 SLC30A2Q9BRI3 323 aa21.32■■□□□ 1
VEGFA-220ENST00000519767 RBM4Q9BWF3 364 aaKnown RBP21.32■■□□□ 1
VEGFA-220ENST00000519767 TMEM100Q9NV29 134 aa21.32■■□□□ 1
VEGFA-220ENST00000519767 CYB5R1Q9UHQ9 305 aa21.32■■□□□ 1
VEGFA-220ENST00000519767 KCNG2Q9UJ96 466 aa21.32■■□□□ 1
VEGFA-220ENST00000519767 OR6C68A6NDL8 312 aa21.31■■□□□ 1
VEGFA-220ENST00000519767 HLA-DQA2P01906 255 aa21.31■■□□□ 1
VEGFA-220ENST00000519767 KRTAP27-1Q3LI81 207 aa21.31■■□□□ 1
VEGFA-220ENST00000519767 SLC18B1Q6NT16 456 aa21.31■■□□□ 1
VEGFA-220ENST00000519767 PIGWQ7Z7B1 504 aa21.31■■□□□ 1
VEGFA-220ENST00000519767 DEFB107AQ8IZN7 70 aa21.31■■□□□ 1
VEGFA-220ENST00000519767 POP5Q969H6 163 aaKnown RBP21.31■■□□□ 1
VEGFA-220ENST00000519767 MEGF10Q96KG7 1140 aa21.31■■□□□ 1
VEGFA-220ENST00000519767 ARL8BQ9NVJ2 186 aa21.31■■□□□ 1
VEGFA-220ENST00000519767 DYSFO75923 2080 aa21.31■■□□□ 1
VEGFA-220ENST00000519767 LRRC30A6NM36 301 aa21.3■■□□□ 1
VEGFA-220ENST00000519767 IQCF6A8MYZ5 107 aa21.3■■□□□ 1
VEGFA-220ENST00000519767 FSHBP01225 129 aa21.3■■□□□ 1
VEGFA-220ENST00000519767 MALLQ13021 153 aa21.3■■□□□ 1
VEGFA-220ENST00000519767 PGBD2Q6P3X8 592 aa21.3■■□□□ 1
VEGFA-220ENST00000519767 ZNF620Q6ZNG0 422 aa21.3■■□□□ 1
VEGFA-220ENST00000519767 OR52E2Q8NGJ4 325 aa21.3■■□□□ 1
VEGFA-220ENST00000519767 ATF6BQ99941 703 aa21.3■■□□□ 1
VEGFA-220ENST00000519767 TRIM15Q9C019 465 aa21.3■■□□□ 1
VEGFA-220ENST00000519767 NTN4Q9HB63 628 aa21.3■■□□□ 1
VEGFA-220ENST00000519767 A0A1B0GWJ7 208 aa21.29■■□□□ 1
VEGFA-220ENST00000519767 F5H5K5 113 aa21.29■■□□□ 1
VEGFA-220ENST00000519767 RGS9O75916 674 aaPredicted RBP21.29■■□□□ 1
VEGFA-220ENST00000519767 FSTL3O95633 263 aa21.29■■□□□ 1
VEGFA-220ENST00000519767 ACSM4P0C7M7 580 aa21.29■■□□□ 1
VEGFA-220ENST00000519767 GGT2P36268 569 aa21.29■■□□□ 1
VEGFA-220ENST00000519767 COMPP49747 757 aaPredicted RBP21.29■■□□□ 1
VEGFA-220ENST00000519767 MMP16P51512 607 aa21.29■■□□□ 1
VEGFA-220ENST00000519767 ACTG1P63261 375 aa21.29■■□□□ 1
VEGFA-220ENST00000519767 MXRA7P84157 204 aa21.29■■□□□ 1
VEGFA-220ENST00000519767 ZNF181Q2M3W8 571 aa21.29■■□□□ 1
VEGFA-220ENST00000519767 ESCO2Q56NI9 601 aa21.29■■□□□ 1
VEGFA-220ENST00000519767 OR52L1Q8NGH7 329 aa21.29■■□□□ 1
VEGFA-220ENST00000519767 GCDHQ92947 438 aaPredicted RBP21.29■■□□□ 1
VEGFA-220ENST00000519767 MMP26Q9NRE1 261 aa21.29■■□□□ 1
VEGFA-220ENST00000519767 AUP1Q9Y679 476 aa21.29■■□□□ 1
VEGFA-220ENST00000519767 TANC2Q9HCD6 1990 aa21.28■■□□□ 1
VEGFA-220ENST00000519767 A8MXK9 166 aa21.28■■□□□ 1
VEGFA-220ENST00000519767 F5H0A9 414 aaPredicted RBP21.28■■□□□ 1
VEGFA-220ENST00000519767 WNT2P09544 360 aa21.28■■□□□ 1
VEGFA-220ENST00000519767 ZNF823P16415 610 aa21.28■■□□□ 1
VEGFA-220ENST00000519767 TPTEP56180 551 aa21.28■■□□□ 1
VEGFA-220ENST00000519767 KHDRBS1Q07666 443 aaKnown RBP eCLIP21.28■■□□□ 1
VEGFA-220ENST00000519767 TRAP1Q12931 704 aaKnown RBP21.28■■□□□ 1
VEGFA-220ENST00000519767 ZNF154Q13106 437 aa21.28■■□□□ 1
VEGFA-220ENST00000519767 SLC35F1Q5T1Q4 408 aa21.28■■□□□ 1
VEGFA-220ENST00000519767 CFAP77Q6ZQR2 320 aa21.28■■□□□ 1
VEGFA-220ENST00000519767 LINC00346Q8IVM7 164 aa21.28■■□□□ 1
VEGFA-220ENST00000519767 DEFB108BQ8NET1 73 aa21.28■■□□□ 1
VEGFA-220ENST00000519767 SDR9C7Q8NEX9 313 aa21.28■■□□□ 1
VEGFA-220ENST00000519767 OR10AD1Q8NGE0 317 aa21.28■■□□□ 1
VEGFA-220ENST00000519767 ACTR3BQ9P1U1 418 aa21.28■■□□□ 1
VEGFA-220ENST00000519767 LRCH1Q9Y2L9 728 aa21.28■■□□□ 1
VEGFA-220ENST00000519767 CDH10Q9Y6N8 788 aa21.28■■□□□ 1
VEGFA-220ENST00000519767 TMEM89A2RUT3 159 aa21.27■■□□□ 1
VEGFA-220ENST00000519767 TRAPPC2LH3BP13 241 aa21.27■■□□□ 1
VEGFA-220ENST00000519767 TNFRSF11BO00300 401 aa21.27■■□□□ 1
VEGFA-220ENST00000519767 LCATP04180 440 aa21.27■■□□□ 1
VEGFA-220ENST00000519767 GNGT1P63211 74 aa21.27■■□□□ 1
VEGFA-220ENST00000519767 HNRNPA0Q13151 305 aaKnown RBP21.27■■□□□ 1
VEGFA-220ENST00000519767 GK2Q14410 553 aaPredicted RBP21.27■■□□□ 1
VEGFA-220ENST00000519767 RBMS3Q6XE24 437 aaKnown RBP21.27■■□□□ 1
VEGFA-220ENST00000519767 C1orf87Q8N0U7 546 aa21.27■■□□□ 1
VEGFA-220ENST00000519767 CELF2-AS1Q8N7Q2 184 aa21.27■■□□□ 1
VEGFA-220ENST00000519767 OR2T4Q8NH00 348 aa21.27■■□□□ 1
VEGFA-220ENST00000519767 SPTSSAQ969W0 71 aa21.27■■□□□ 1
VEGFA-220ENST00000519767 ERGIC1Q969X5 290 aa21.27■■□□□ 1
VEGFA-220ENST00000519767 SLC6A7Q99884 636 aa21.27■■□□□ 1
VEGFA-220ENST00000519767 MRI1Q9BV20 369 aa21.27■■□□□ 1
VEGFA-220ENST00000519767 TMEM165Q9HC07 324 aa21.27■■□□□ 1
VEGFA-220ENST00000519767 IL20Q9NYY1 176 aa21.27■■□□□ 1
VEGFA-220ENST00000519767 MIOXQ9UGB7 285 aa21.27■■□□□ 1
VEGFA-220ENST00000519767 INSIG2Q9Y5U4 225 aa21.27■■□□□ 1
VEGFA-220ENST00000519767 LYVE1Q9Y5Y7 322 aa21.27■■□□□ 1
VEGFA-220ENST00000519767 ARHGAP32A7KAX9 2087 aa21.26■□□□□ 0.99
VEGFA-220ENST00000519767 H0YL77 283 aa21.26■□□□□ 0.99
VEGFA-220ENST00000519767 ZNF12P17014 697 aa21.26■□□□□ 0.99
VEGFA-220ENST00000519767 CLEC12AQ5QGZ9 265 aa21.26■□□□□ 0.99
VEGFA-220ENST00000519767 ARHGAP24Q8N264 748 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms