RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 NMNAT3Q96T66 252 aa12.17□□□□□ -0.46
PABPC1-208ENST00000519004 PLAGL1Q9UM63 463 aa12.17□□□□□ -0.46
PABPC1-208ENST00000519004 H3BQ15 152 aa12.16□□□□□ -0.46
PABPC1-208ENST00000519004 CRTAPO75718 401 aaPredicted RBP12.16□□□□□ -0.46
PABPC1-208ENST00000519004 JTBO76095 146 aa12.16□□□□□ -0.46
PABPC1-208ENST00000519004 RPLP1P05386 114 aaKnown RBP12.16□□□□□ -0.46
PABPC1-208ENST00000519004 TACSTD2P09758 323 aa12.16□□□□□ -0.46
PABPC1-208ENST00000519004 GNALP38405 381 aa12.16□□□□□ -0.46
PABPC1-208ENST00000519004 DMWDQ09019 674 aa12.16□□□□□ -0.46
PABPC1-208ENST00000519004 TRA2AQ13595 282 aaKnown RBP eCLIP12.16□□□□□ -0.46
PABPC1-208ENST00000519004 SLC22A6Q4U2R8 563 aa12.16□□□□□ -0.46
PABPC1-208ENST00000519004 C4orf17Q53FE4 359 aa12.16□□□□□ -0.46
PABPC1-208ENST00000519004 EIPR1Q53HC9 387 aa12.16□□□□□ -0.46
PABPC1-208ENST00000519004 Q6ZVL8 140 aa12.16□□□□□ -0.46
PABPC1-208ENST00000519004 FAM220AQ7Z4H9 259 aa12.16□□□□□ -0.46
PABPC1-208ENST00000519004 ZNF689Q96CS4 500 aaPredicted RBP12.16□□□□□ -0.46
PABPC1-208ENST00000519004 SHDQ96IW2 340 aa12.16□□□□□ -0.46
PABPC1-208ENST00000519004 NRTNQ99748 197 aa12.16□□□□□ -0.46
PABPC1-208ENST00000519004 MENTQ9BUN1 341 aa12.16□□□□□ -0.46
PABPC1-208ENST00000519004 AICDAQ9GZX7 198 aa12.16□□□□□ -0.46
PABPC1-208ENST00000519004 SLC26A1Q9H2B4 701 aa12.16□□□□□ -0.46
PABPC1-208ENST00000519004 PITPNC1Q9UKF7 332 aa12.16□□□□□ -0.46
PABPC1-208ENST00000519004 WDR45Q9Y484 360 aa12.16□□□□□ -0.46
PABPC1-208ENST00000519004 SCN5AQ14524 2016 aa12.16□□□□□ -0.46
PABPC1-208ENST00000519004 VWA8A3KMH1 1905 aa12.16□□□□□ -0.46
PABPC1-208ENST00000519004 TICRRQ7Z2Z1 1910 aa12.16□□□□□ -0.46
PABPC1-208ENST00000519004 FAM171A2A8MVW0 826 aa12.16□□□□□ -0.46
PABPC1-208ENST00000519004 TP53I11O14683 189 aa12.16□□□□□ -0.46
PABPC1-208ENST00000519004 GABRR1P24046 479 aa12.16□□□□□ -0.46
PABPC1-208ENST00000519004 ARSJQ5FYB0 599 aaPredicted RBP12.16□□□□□ -0.46
PABPC1-208ENST00000519004 PHF19Q5T6S3 580 aa12.16□□□□□ -0.46
PABPC1-208ENST00000519004 LINC01590Q5TEZ4 76 aa12.16□□□□□ -0.46
PABPC1-208ENST00000519004 ASPHD2Q6ICH7 369 aa12.16□□□□□ -0.46
PABPC1-208ENST00000519004 ZNF467Q7Z7K2 595 aaPredicted RBP12.16□□□□□ -0.46
PABPC1-208ENST00000519004 TMEM183AQ8IXX5 376 aa12.16□□□□□ -0.46
PABPC1-208ENST00000519004 GVQW1Q8N7I0 195 aa12.16□□□□□ -0.46
PABPC1-208ENST00000519004 ZNF676Q8N7Q3 588 aa12.16□□□□□ -0.46
PABPC1-208ENST00000519004 SLC16A11Q8NCK7 471 aa12.16□□□□□ -0.46
PABPC1-208ENST00000519004 MARCH1Q8TCQ1 289 aa12.16□□□□□ -0.46
PABPC1-208ENST00000519004 PBDC1Q9BVG4 233 aa12.16□□□□□ -0.46
PABPC1-208ENST00000519004 NMNAT2Q9BZQ4 307 aa12.16□□□□□ -0.46
PABPC1-208ENST00000519004 CAPN10Q9HC96 672 aa12.16□□□□□ -0.46
PABPC1-208ENST00000519004 ZNF346Q9UL40 294 aaKnown RBP12.16□□□□□ -0.46
PABPC1-208ENST00000519004 ZNF840PA6NDX5 716 aa12.15□□□□□ -0.46
PABPC1-208ENST00000519004 WIPF3A6NGB9 483 aa12.15□□□□□ -0.46
PABPC1-208ENST00000519004 MASP2O00187 686 aa12.15□□□□□ -0.46
PABPC1-208ENST00000519004 NGFRP08138 427 aa12.15□□□□□ -0.46
PABPC1-208ENST00000519004 PET100P0DJ07 73 aa12.15□□□□□ -0.46
PABPC1-208ENST00000519004 PGA4P0DJD7 388 aa12.15□□□□□ -0.46
PABPC1-208ENST00000519004 PGA5P0DJD9 388 aa12.15□□□□□ -0.46
PABPC1-208ENST00000519004 THEGLP0DJG4 465 aa12.15□□□□□ -0.46
PABPC1-208ENST00000519004 HOXC8P31273 242 aa12.15□□□□□ -0.46
PABPC1-208ENST00000519004 TAS2R31P59538 309 aa12.15□□□□□ -0.46
PABPC1-208ENST00000519004 S100A10P60903 97 aa12.15□□□□□ -0.46
PABPC1-208ENST00000519004 HIKESHIQ53FT3 197 aa12.15□□□□□ -0.46
PABPC1-208ENST00000519004 OPN5Q6U736 354 aa12.15□□□□□ -0.46
PABPC1-208ENST00000519004 MDGA2Q7Z553 956 aa12.15□□□□□ -0.46
PABPC1-208ENST00000519004 GRASPQ7Z6J2 395 aaPredicted RBP12.15□□□□□ -0.46
PABPC1-208ENST00000519004 FJX1Q86VR8 437 aa12.15□□□□□ -0.46
PABPC1-208ENST00000519004 PLPP7Q8NBV4 271 aa12.15□□□□□ -0.46
PABPC1-208ENST00000519004 OR13C9Q8NGT0 318 aa12.15□□□□□ -0.46
PABPC1-208ENST00000519004 ADAMTS15Q8TE58 950 aa12.15□□□□□ -0.46
PABPC1-208ENST00000519004 TMEM230Q96A57 120 aa12.15□□□□□ -0.46
PABPC1-208ENST00000519004 TIFAQ96CG3 184 aa12.15□□□□□ -0.46
PABPC1-208ENST00000519004 RARRES2Q99969 163 aa12.15□□□□□ -0.46
PABPC1-208ENST00000519004 GPR87Q9BY21 358 aa12.15□□□□□ -0.46
PABPC1-208ENST00000519004 PLEKHA2Q9HB19 425 aa12.15□□□□□ -0.46
PABPC1-208ENST00000519004 PLXNA2O75051 1894 aa12.15□□□□□ -0.46
PABPC1-208ENST00000519004 A0A1B0GW64 132 aa12.15□□□□□ -0.47
PABPC1-208ENST00000519004 ELOA3DA6NLF2 546 aaPredicted RBP12.15□□□□□ -0.47
PABPC1-208ENST00000519004 GALTP07902 379 aa12.15□□□□□ -0.47
PABPC1-208ENST00000519004 OR4A8P0C604 315 aa12.15□□□□□ -0.47
PABPC1-208ENST00000519004 PNLIPP16233 465 aa12.15□□□□□ -0.47
PABPC1-208ENST00000519004 HRH1P35367 487 aa12.15□□□□□ -0.47
PABPC1-208ENST00000519004 SSR2P43308 183 aa12.15□□□□□ -0.47
PABPC1-208ENST00000519004 CAMLGP49069 296 aa12.15□□□□□ -0.47
PABPC1-208ENST00000519004 AFF3P51826 1226 aaKnown RBP12.15□□□□□ -0.47
PABPC1-208ENST00000519004 RBX1P62877 108 aa12.15□□□□□ -0.47
PABPC1-208ENST00000519004 SLC35A1P78382 337 aa12.15□□□□□ -0.47
PABPC1-208ENST00000519004 DUSP8Q13202 625 aa12.15□□□□□ -0.47
PABPC1-208ENST00000519004 SLC9A3R2Q15599 337 aa12.15□□□□□ -0.47
PABPC1-208ENST00000519004 ELOA3BQ3SY89 546 aa12.15□□□□□ -0.47
PABPC1-208ENST00000519004 MRPL2Q5T653 305 aaKnown RBP12.15□□□□□ -0.47
PABPC1-208ENST00000519004 ABLIM2Q6H8Q1 611 aa12.15□□□□□ -0.47
PABPC1-208ENST00000519004 RSPO2Q6UXX9 243 aaPredicted RBP12.15□□□□□ -0.47
PABPC1-208ENST00000519004 ELOA3Q8NG57 546 aa12.15□□□□□ -0.47
PABPC1-208ENST00000519004 MFSD8Q8NHS3 518 aa12.15□□□□□ -0.47
PABPC1-208ENST00000519004 C2orf50Q96LR7 162 aa12.15□□□□□ -0.47
PABPC1-208ENST00000519004 GAL3ST4Q96RP7 486 aa12.15□□□□□ -0.47
PABPC1-208ENST00000519004 PTPN18Q99952 460 aa12.15□□□□□ -0.47
PABPC1-208ENST00000519004 SYT3Q9BQG1 590 aa12.15□□□□□ -0.47
PABPC1-208ENST00000519004 AIF1LQ9BQI0 150 aa12.15□□□□□ -0.47
PABPC1-208ENST00000519004 SMIM3Q9BZL3 60 aa12.15□□□□□ -0.47
PABPC1-208ENST00000519004 ARV1Q9H2C2 271 aa12.15□□□□□ -0.47
PABPC1-208ENST00000519004 RXFP3Q9NSD7 469 aa12.15□□□□□ -0.47
PABPC1-208ENST00000519004 LUZP4Q9P127 313 aa12.15□□□□□ -0.47
PABPC1-208ENST00000519004 KCNK6Q9Y257 313 aa12.15□□□□□ -0.47
PABPC1-208ENST00000519004 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.14□□□□□ -0.47
PABPC1-208ENST00000519004 A0A1W2PR48 441 aa12.14□□□□□ -0.47
PABPC1-208ENST00000519004 GEMIN2O14893 280 aaKnown RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms