RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 IGHV4-4A0A075B6R2 117 aa3.21□□□□□ -1.9
RNU4-60P-201ENST00000517239 SLC5A10A0PJK1 596 aa3.21□□□□□ -1.9
RNU4-60P-201ENST00000517239 ZNF487B1APH4 448 aa3.21□□□□□ -1.9
RNU4-60P-201ENST00000517239 C21orf140B9A014 251 aa3.21□□□□□ -1.9
RNU4-60P-201ENST00000517239 G3V2L1 256 aa3.21□□□□□ -1.9
RNU4-60P-201ENST00000517239 K7EMT4 169 aa3.21□□□□□ -1.9
RNU4-60P-201ENST00000517239 K7EQD1 137 aa3.21□□□□□ -1.9
RNU4-60P-201ENST00000517239 CDIPTO14735 213 aa3.21□□□□□ -1.9
RNU4-60P-201ENST00000517239 PFDN6O15212 129 aa3.21□□□□□ -1.9
RNU4-60P-201ENST00000517239 SSNA1O43805 119 aa3.21□□□□□ -1.9
RNU4-60P-201ENST00000517239 IDH3BO43837 385 aa3.21□□□□□ -1.9
RNU4-60P-201ENST00000517239 AQP8O94778 261 aa3.21□□□□□ -1.9
RNU4-60P-201ENST00000517239 NXPH4O95158 308 aa3.21□□□□□ -1.9
RNU4-60P-201ENST00000517239 SNRPCP09234 159 aaKnown RBP3.21□□□□□ -1.9
RNU4-60P-201ENST00000517239 GGT1P19440 569 aa3.21□□□□□ -1.9
RNU4-60P-201ENST00000517239 USF1P22415 310 aaPredicted RBP3.21□□□□□ -1.9
RNU4-60P-201ENST00000517239 F8A1P23610 371 aa3.21□□□□□ -1.9
RNU4-60P-201ENST00000517239 GALR1P47211 349 aa3.21□□□□□ -1.9
RNU4-60P-201ENST00000517239 OR1D4P47884 311 aa3.21□□□□□ -1.9
RNU4-60P-201ENST00000517239 ALDH3B2P48448 385 aa3.21□□□□□ -1.9
RNU4-60P-201ENST00000517239 RAB8AP61006 207 aa3.21□□□□□ -1.9
RNU4-60P-201ENST00000517239 RPL18AQ02543 176 aaKnown RBP3.21□□□□□ -1.9
RNU4-60P-201ENST00000517239 ZNF92Q03936 586 aa3.21□□□□□ -1.9
RNU4-60P-201ENST00000517239 TAF1AQ15573 450 aaPredicted RBP3.21□□□□□ -1.9
RNU4-60P-201ENST00000517239 OR7A5Q15622 319 aa3.21□□□□□ -1.9
RNU4-60P-201ENST00000517239 ALX1Q15699 326 aa3.21□□□□□ -1.9
RNU4-60P-201ENST00000517239 ZNF726P1Q15940 193 aa3.21□□□□□ -1.9
RNU4-60P-201ENST00000517239 PXDC1Q5TGL8 231 aa3.21□□□□□ -1.9
RNU4-60P-201ENST00000517239 UBE2UQ5VVX9 321 aa3.21□□□□□ -1.9
RNU4-60P-201ENST00000517239 FAM45BPQ6NSW5 357 aa3.21□□□□□ -1.9
RNU4-60P-201ENST00000517239 CREB3L2Q70SY1 520 aa3.21□□□□□ -1.9
RNU4-60P-201ENST00000517239 SMIM15Q7Z3B0 74 aa3.21□□□□□ -1.9
RNU4-60P-201ENST00000517239 LRRTM1Q86UE6 522 aa3.21□□□□□ -1.9
RNU4-60P-201ENST00000517239 NT5DC3Q86UY8 548 aa3.21□□□□□ -1.9
RNU4-60P-201ENST00000517239 CALHM1Q8IU99 346 aa3.21□□□□□ -1.9
RNU4-60P-201ENST00000517239 STPG2Q8N412 459 aa3.21□□□□□ -1.9
RNU4-60P-201ENST00000517239 RIBC1Q8N443 379 aaPredicted RBP3.21□□□□□ -1.9
RNU4-60P-201ENST00000517239 ZFP41Q8N8Y5 198 aa3.21□□□□□ -1.9
RNU4-60P-201ENST00000517239 PIGXQ8TBF5 258 aa3.21□□□□□ -1.9
RNU4-60P-201ENST00000517239 SYNPRQ8TBG9 265 aa3.21□□□□□ -1.9
RNU4-60P-201ENST00000517239 FAM45AQ8TCE6 357 aa3.21□□□□□ -1.9
RNU4-60P-201ENST00000517239 TMEM234Q8WY98 164 aa3.21□□□□□ -1.9
RNU4-60P-201ENST00000517239 FRAT1Q92837 279 aaPredicted RBP3.21□□□□□ -1.9
RNU4-60P-201ENST00000517239 TMEM54Q969K7 222 aa3.21□□□□□ -1.9
RNU4-60P-201ENST00000517239 TESCQ96BS2 214 aa3.21□□□□□ -1.9
RNU4-60P-201ENST00000517239 SMIM19Q96E16 107 aa3.21□□□□□ -1.9
RNU4-60P-201ENST00000517239 FBXO17Q96EF6 278 aa3.21□□□□□ -1.9
RNU4-60P-201ENST00000517239 CEP19Q96LK0 163 aa3.21□□□□□ -1.9
RNU4-60P-201ENST00000517239 EBNA1BP2Q99848 306 aaKnown RBP3.21□□□□□ -1.9
RNU4-60P-201ENST00000517239 UGT2B28Q9BY64 529 aa3.21□□□□□ -1.9
RNU4-60P-201ENST00000517239 UBXN6Q9BZV1 441 aa3.21□□□□□ -1.9
RNU4-60P-201ENST00000517239 TMEM27Q9HBJ8 222 aa3.21□□□□□ -1.9
RNU4-60P-201ENST00000517239 GID8Q9NWU2 228 aa3.21□□□□□ -1.9
RNU4-60P-201ENST00000517239 KLF12Q9Y4X4 402 aa3.21□□□□□ -1.9
RNU4-60P-201ENST00000517239 SNAPC4Q5SXM2 1469 aa3.21□□□□□ -1.9
RNU4-60P-201ENST00000517239 C9orf84Q5VXU9 1444 aa3.2□□□□□ -1.9
RNU4-60P-201ENST00000517239 DENND4AQ7Z401 1863 aa3.2□□□□□ -1.9
RNU4-60P-201ENST00000517239 ERVV-1B6SEH8 477 aa3.2□□□□□ -1.9
RNU4-60P-201ENST00000517239 ERVV-2B6SEH9 535 aa3.2□□□□□ -1.9
RNU4-60P-201ENST00000517239 PRAC2D3DTV9 90 aa3.2□□□□□ -1.9
RNU4-60P-201ENST00000517239 ANKRD65E5RJM6 399 aa3.2□□□□□ -1.9
RNU4-60P-201ENST00000517239 CCRL2O00421 344 aa3.2□□□□□ -1.9
RNU4-60P-201ENST00000517239 CXCR6O00574 342 aa3.2□□□□□ -1.9
RNU4-60P-201ENST00000517239 HPRT1P00492 218 aa3.2□□□□□ -1.9
RNU4-60P-201ENST00000517239 IFNA14P01570 189 aa3.2□□□□□ -1.9
RNU4-60P-201ENST00000517239 CD8AP01732 235 aa3.2□□□□□ -1.9
RNU4-60P-201ENST00000517239 IGHG1P01857 330 aa3.2□□□□□ -1.9
RNU4-60P-201ENST00000517239 RLN2P04090 185 aa3.2□□□□□ -1.9
RNU4-60P-201ENST00000517239 TYMSP04818 313 aa3.2□□□□□ -1.9
RNU4-60P-201ENST00000517239 H2AFZP0C0S5 128 aa3.2□□□□□ -1.9
RNU4-60P-201ENST00000517239 OR5AL1P0C617 328 aa3.2□□□□□ -1.9
RNU4-60P-201ENST00000517239 SLC2A1P11166 492 aa3.2□□□□□ -1.9
RNU4-60P-201ENST00000517239 ZNF20P17024 532 aa3.2□□□□□ -1.9
RNU4-60P-201ENST00000517239 FUT3P21217 361 aa3.2□□□□□ -1.9
RNU4-60P-201ENST00000517239 LOXP28300 417 aaPredicted RBP3.2□□□□□ -1.9
RNU4-60P-201ENST00000517239 SHC1P29353 583 aa3.2□□□□□ -1.9
RNU4-60P-201ENST00000517239 RPA3P35244 121 aaPredicted RBP3.2□□□□□ -1.9
RNU4-60P-201ENST00000517239 SPRP35270 261 aaPredicted RBP3.2□□□□□ -1.9
RNU4-60P-201ENST00000517239 HRH1P35367 487 aa3.2□□□□□ -1.9
RNU4-60P-201ENST00000517239 GCKP35557 465 aa3.2□□□□□ -1.9
RNU4-60P-201ENST00000517239 TGFBR2P37173 567 aa3.2□□□□□ -1.9
RNU4-60P-201ENST00000517239 OPRL1P41146 370 aa3.2□□□□□ -1.9
RNU4-60P-201ENST00000517239 GLP1RP43220 463 aa3.2□□□□□ -1.9
RNU4-60P-201ENST00000517239 FABP6P51161 128 aa3.2□□□□□ -1.9
RNU4-60P-201ENST00000517239 UBE2E1P51965 193 aa3.2□□□□□ -1.9
RNU4-60P-201ENST00000517239 RND2P52198 227 aa3.2□□□□□ -1.9
RNU4-60P-201ENST00000517239 APOC4P55056 127 aa3.2□□□□□ -1.9
RNU4-60P-201ENST00000517239 ZNF121P58317 390 aaPredicted RBP3.2□□□□□ -1.9
RNU4-60P-201ENST00000517239 SRSF6Q13247 344 aaKnown RBP3.2□□□□□ -1.9
RNU4-60P-201ENST00000517239 ZNF266Q14584 549 aa3.2□□□□□ -1.9
RNU4-60P-201ENST00000517239 SLC9A3R2Q15599 337 aa3.2□□□□□ -1.9
RNU4-60P-201ENST00000517239 HACD4Q5VWC8 232 aa3.2□□□□□ -1.9
RNU4-60P-201ENST00000517239 CD200R1LQ6Q8B3 271 aa3.2□□□□□ -1.9
RNU4-60P-201ENST00000517239 Q6ZVH6 145 aa3.2□□□□□ -1.9
RNU4-60P-201ENST00000517239 MRPL55Q7Z7F7 128 aaKnown RBP3.2□□□□□ -1.9
RNU4-60P-201ENST00000517239 TMEM135Q86UB9 458 aa3.2□□□□□ -1.9
RNU4-60P-201ENST00000517239 TAC4Q86UU9 113 aa3.2□□□□□ -1.9
RNU4-60P-201ENST00000517239 CARM1Q86X55 608 aa3.2□□□□□ -1.9
RNU4-60P-201ENST00000517239 RAB43Q86YS6 212 aa3.2□□□□□ -1.9
RNU4-60P-201ENST00000517239 METTL13Q8N6R0 699 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms