RNA–Protein interactions for RNA: ENST00000516850.1

RNU6-1088P-201, Transcript of RNA, U6 small nuclear 1088, pseudogene, humanhuman

BASIC

Gene RNU6-1088P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1088P-201ENST00000516850 LINC00574Q9H8X3 128 aa0.78□□□□□ -2.28
RNU6-1088P-201ENST00000516850 TMEM27Q9HBJ8 222 aa0.78□□□□□ -2.28
RNU6-1088P-201ENST00000516850 DAZ1Q9NQZ3 744 aaKnown RBP0.78□□□□□ -2.28
RNU6-1088P-201ENST00000516850 IGLV10-54A0A075B6I4 117 aa0.77□□□□□ -2.29
RNU6-1088P-201ENST00000516850 IGLV1-36A0A0B4J1U3 117 aa0.77□□□□□ -2.29
RNU6-1088P-201ENST00000516850 GLYATL1P3A0A0U1RQE8 302 aa0.77□□□□□ -2.29
RNU6-1088P-201ENST00000516850 H7C417 338 aa0.77□□□□□ -2.29
RNU6-1088P-201ENST00000516850 NUPL2O15504 423 aaKnown RBP0.77□□□□□ -2.29
RNU6-1088P-201ENST00000516850 SCO1O75880 301 aa0.77□□□□□ -2.29
RNU6-1088P-201ENST00000516850 TSPAN12O95859 305 aa0.77□□□□□ -2.29
RNU6-1088P-201ENST00000516850 ATF6P18850 670 aa0.77□□□□□ -2.29
RNU6-1088P-201ENST00000516850 GGT1P19440 569 aa0.77□□□□□ -2.29
RNU6-1088P-201ENST00000516850 CSNK1EP49674 416 aaKnown RBP0.77□□□□□ -2.29
RNU6-1088P-201ENST00000516850 KCNJ2P63252 427 aa0.77□□□□□ -2.29
RNU6-1088P-201ENST00000516850 CYP24A1Q07973 514 aa0.77□□□□□ -2.29
RNU6-1088P-201ENST00000516850 TGFBIQ15582 683 aa0.77□□□□□ -2.29
RNU6-1088P-201ENST00000516850 OR7A5Q15622 319 aa0.77□□□□□ -2.29
RNU6-1088P-201ENST00000516850 H2BFWTQ7Z2G1 175 aa0.77□□□□□ -2.29
RNU6-1088P-201ENST00000516850 ZFP41Q8N8Y5 198 aa0.77□□□□□ -2.29
RNU6-1088P-201ENST00000516850 CHST4Q8NCG5 386 aa0.77□□□□□ -2.29
RNU6-1088P-201ENST00000516850 OR1L4Q8NGR5 311 aa0.77□□□□□ -2.29
RNU6-1088P-201ENST00000516850 ZNF502Q8TBZ5 544 aa0.77□□□□□ -2.29
RNU6-1088P-201ENST00000516850 CPNE4Q96A23 557 aaPredicted RBP0.77□□□□□ -2.29
RNU6-1088P-201ENST00000516850 TRIM44Q96DX7 344 aaPredicted RBP0.77□□□□□ -2.29
RNU6-1088P-201ENST00000516850 TMEM43Q9BTV4 400 aa0.77□□□□□ -2.29
RNU6-1088P-201ENST00000516850 HMGXB4Q9UGU5 601 aa0.77□□□□□ -2.29
RNU6-1088P-201ENST00000516850 SNTNA6NMZ2 147 aa0.76□□□□□ -2.29
RNU6-1088P-201ENST00000516850 LRRIQ3A6PVS8 624 aaPredicted RBP0.76□□□□□ -2.29
RNU6-1088P-201ENST00000516850 MAGEB3O15480 346 aa0.76□□□□□ -2.29
RNU6-1088P-201ENST00000516850 ZNF208O43345 1280 aa0.76□□□□□ -2.29
RNU6-1088P-201ENST00000516850 TMEM50AO95807 157 aa0.76□□□□□ -2.29
RNU6-1088P-201ENST00000516850 HSPA5P11021 654 aaKnown RBP0.76□□□□□ -2.29
RNU6-1088P-201ENST00000516850 ATP1B2P14415 290 aaPredicted RBP0.76□□□□□ -2.29
RNU6-1088P-201ENST00000516850 GPX4P36969 197 aaPredicted RBP0.76□□□□□ -2.29
RNU6-1088P-201ENST00000516850 RPS23P62266 143 aaKnown RBP0.76□□□□□ -2.29
RNU6-1088P-201ENST00000516850 DEFB103AP81534 67 aa0.76□□□□□ -2.29
RNU6-1088P-201ENST00000516850 SIGLEC14Q08ET2 396 aa0.76□□□□□ -2.29
RNU6-1088P-201ENST00000516850 PNOCQ13519 176 aa0.76□□□□□ -2.29
RNU6-1088P-201ENST00000516850 ZNF141Q15928 474 aa0.76□□□□□ -2.29
RNU6-1088P-201ENST00000516850 GPR107Q5VW38 600 aa0.76□□□□□ -2.29
RNU6-1088P-201ENST00000516850 WDR59Q6PJI9 974 aa0.76□□□□□ -2.29
RNU6-1088P-201ENST00000516850 EFL1Q7Z2Z2 1120 aaKnown RBP0.76□□□□□ -2.29
RNU6-1088P-201ENST00000516850 MDP1Q86V88 176 aa0.76□□□□□ -2.29
RNU6-1088P-201ENST00000516850 SLC26A10Q8NG04 563 aa0.76□□□□□ -2.29
RNU6-1088P-201ENST00000516850 OR10AD1Q8NGE0 317 aa0.76□□□□□ -2.29
RNU6-1088P-201ENST00000516850 OR1S2Q8NGQ3 325 aa0.76□□□□□ -2.29
RNU6-1088P-201ENST00000516850 SLC7A13Q8TCU3 470 aa0.76□□□□□ -2.29
RNU6-1088P-201ENST00000516850 TMEM230Q96A57 120 aa0.76□□□□□ -2.29
RNU6-1088P-201ENST00000516850 IGF2BP2-AS1Q96M15 143 aa0.76□□□□□ -2.29
RNU6-1088P-201ENST00000516850 RNF145Q96MT1 663 aa0.76□□□□□ -2.29
RNU6-1088P-201ENST00000516850 NT5MQ9NPB1 228 aa0.76□□□□□ -2.29
RNU6-1088P-201ENST00000516850 TMEM9BQ9NQ34 198 aa0.76□□□□□ -2.29
RNU6-1088P-201ENST00000516850 IGKV1-8A0A0C4DH67 115 aa0.75□□□□□ -2.29
RNU6-1088P-201ENST00000516850 TNFRSF11BO00300 401 aa0.75□□□□□ -2.29
RNU6-1088P-201ENST00000516850 SNNO75324 88 aaPredicted RBP0.75□□□□□ -2.29
RNU6-1088P-201ENST00000516850 MMP7P09237 267 aaPredicted RBP0.75□□□□□ -2.29
RNU6-1088P-201ENST00000516850 CD28P10747 220 aa0.75□□□□□ -2.29
RNU6-1088P-201ENST00000516850 HSPD1P10809 573 aaKnown RBP0.75□□□□□ -2.29
RNU6-1088P-201ENST00000516850 PDK3Q15120 406 aa0.75□□□□□ -2.29
RNU6-1088P-201ENST00000516850 CHRNA6Q15825 494 aa0.75□□□□□ -2.29
RNU6-1088P-201ENST00000516850 SLC25A35Q3KQZ1 300 aa0.75□□□□□ -2.29
RNU6-1088P-201ENST00000516850 TMEM150AQ86TG1 271 aa0.75□□□□□ -2.29
RNU6-1088P-201ENST00000516850 ZNF645Q8N7E2 425 aa0.75□□□□□ -2.29
RNU6-1088P-201ENST00000516850 LINC00469Q8N7U9 141 aa0.75□□□□□ -2.29
RNU6-1088P-201ENST00000516850 OR1L6Q8NGR2 347 aa0.75□□□□□ -2.29
RNU6-1088P-201ENST00000516850 OR2T3Q8NH03 318 aa0.75□□□□□ -2.29
RNU6-1088P-201ENST00000516850 ACTL9Q8TC94 416 aa0.75□□□□□ -2.29
RNU6-1088P-201ENST00000516850 DTNBP1Q96EV8 351 aa0.75□□□□□ -2.29
RNU6-1088P-201ENST00000516850 MED4Q9NPJ6 270 aa0.75□□□□□ -2.29
RNU6-1088P-201ENST00000516850 PDP1Q9P0J1 537 aaPredicted RBP0.75□□□□□ -2.29
RNU6-1088P-201ENST00000516850 IKZF2Q9UKS7 526 aa0.75□□□□□ -2.29
RNU6-1088P-201ENST00000516850 NUP50Q9UKX7 468 aa0.75□□□□□ -2.29
RNU6-1088P-201ENST00000516850 IGHV1-69DA0A0B4J2H0 117 aa0.74□□□□□ -2.29
RNU6-1088P-201ENST00000516850 A0A0J9YXV3 536 aa0.74□□□□□ -2.29
RNU6-1088P-201ENST00000516850 A0A1W2PPV9 198 aa0.74□□□□□ -2.29
RNU6-1088P-201ENST00000516850 C15orf65H3BRN8 121 aa0.74□□□□□ -2.29
RNU6-1088P-201ENST00000516850 TAAR5O14804 337 aa0.74□□□□□ -2.29
RNU6-1088P-201ENST00000516850 ANGPT2O15123 496 aa0.74□□□□□ -2.29
RNU6-1088P-201ENST00000516850 SYNGR2O43760 224 aa0.74□□□□□ -2.29
RNU6-1088P-201ENST00000516850 PEX11AO75192 247 aa0.74□□□□□ -2.29
RNU6-1088P-201ENST00000516850 FSTL3O95633 263 aa0.74□□□□□ -2.29
RNU6-1088P-201ENST00000516850 CSRP1P21291 193 aaKnown RBP0.74□□□□□ -2.29
RNU6-1088P-201ENST00000516850 U2AF2P26368 475 aaKnown RBP eCLIP0.74□□□□□ -2.29
RNU6-1088P-201ENST00000516850 CDH6P55285 790 aa0.74□□□□□ -2.29
RNU6-1088P-201ENST00000516850 TAS2R43P59537 309 aa0.74□□□□□ -2.29
RNU6-1088P-201ENST00000516850 ELP6Q0PNE2 266 aa0.74□□□□□ -2.29
RNU6-1088P-201ENST00000516850 ILKQ13418 452 aa0.74□□□□□ -2.29
RNU6-1088P-201ENST00000516850 LUZP6Q538Z0 58 aa0.74□□□□□ -2.29
RNU6-1088P-201ENST00000516850 CFAP157Q5JU67 520 aa0.74□□□□□ -2.29
RNU6-1088P-201ENST00000516850 PAGE2Q7Z2X7 111 aa0.74□□□□□ -2.29
RNU6-1088P-201ENST00000516850 MRPL55Q7Z7F7 128 aaKnown RBP0.74□□□□□ -2.29
RNU6-1088P-201ENST00000516850 TMEM25Q86YD3 366 aa0.74□□□□□ -2.29
RNU6-1088P-201ENST00000516850 NPWQ8N729 165 aa0.74□□□□□ -2.29
RNU6-1088P-201ENST00000516850 MUC7Q8TAX7 377 aa0.74□□□□□ -2.29
RNU6-1088P-201ENST00000516850 PLPPR1Q8TBJ4 325 aa0.74□□□□□ -2.29
RNU6-1088P-201ENST00000516850 SLC2A14Q8TDB8 520 aa0.74□□□□□ -2.29
RNU6-1088P-201ENST00000516850 C12orf42Q96LP6 360 aa0.74□□□□□ -2.29
RNU6-1088P-201ENST00000516850 OR5B12Q96R08 314 aa0.74□□□□□ -2.29
RNU6-1088P-201ENST00000516850 OR2V2Q96R30 315 aa0.74□□□□□ -2.29
RNU6-1088P-201ENST00000516850 PDCD1LG2Q9BQ51 273 aa0.74□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms