RNA–Protein interactions for RNA: ENST00000515597.1

LINC01088-211, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best)

Gene LINC01088, Length 664 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-211ENST00000515597 RHOXF2BP0C7M4 288 aa2.05□□□□□ -2.08
LINC01088-211ENST00000515597 CISD3P0C7P0 127 aa2.05□□□□□ -2.08
LINC01088-211ENST00000515597 ZNF286BP0CG31 522 aa2.05□□□□□ -2.08
LINC01088-211ENST00000515597 CD1CP29017 333 aa2.05□□□□□ -2.08
LINC01088-211ENST00000515597 YAP1P46937 504 aaKnown RBP2.05□□□□□ -2.08
LINC01088-211ENST00000515597 CYB561P49447 251 aa2.05□□□□□ -2.08
LINC01088-211ENST00000515597 CCR8P51685 355 aa2.05□□□□□ -2.08
LINC01088-211ENST00000515597 UGT2B15P54855 530 aa2.05□□□□□ -2.08
LINC01088-211ENST00000515597 OGDHQ02218 1023 aa2.05□□□□□ -2.08
LINC01088-211ENST00000515597 AQP6Q13520 282 aa2.05□□□□□ -2.08
LINC01088-211ENST00000515597 IGFBP7Q16270 282 aa2.05□□□□□ -2.08
LINC01088-211ENST00000515597 LRRC23Q53EV4 343 aaPredicted RBP2.05□□□□□ -2.08
LINC01088-211ENST00000515597 TRIM40Q6P9F5 258 aa2.05□□□□□ -2.08
LINC01088-211ENST00000515597 ENPP6Q6UWR7 440 aa2.05□□□□□ -2.08
LINC01088-211ENST00000515597 TRIM69Q86WT6 500 aa2.05□□□□□ -2.08
LINC01088-211ENST00000515597 PIANPQ8IYJ0 282 aa2.05□□□□□ -2.08
LINC01088-211ENST00000515597 MREGQ8N565 214 aa2.05□□□□□ -2.08
LINC01088-211ENST00000515597 TEX9Q8N6V9 391 aa2.05□□□□□ -2.08
LINC01088-211ENST00000515597 FAM86B1Q8N7N1 296 aa2.05□□□□□ -2.08
LINC01088-211ENST00000515597 OR5D13Q8NGL4 314 aa2.05□□□□□ -2.08
LINC01088-211ENST00000515597 STMN2Q93045 179 aa2.05□□□□□ -2.08
LINC01088-211ENST00000515597 IFT74Q96LB3 600 aa2.05□□□□□ -2.08
LINC01088-211ENST00000515597 ZSCAN5AQ9BUG6 496 aa2.05□□□□□ -2.08
LINC01088-211ENST00000515597 MFFQ9GZY8 342 aa2.05□□□□□ -2.08
LINC01088-211ENST00000515597 PPA2Q9H2U2 334 aa2.05□□□□□ -2.08
LINC01088-211ENST00000515597 NOX3Q9HBY0 568 aa2.05□□□□□ -2.08
LINC01088-211ENST00000515597 SLC40A1Q9NP59 571 aa2.05□□□□□ -2.08
LINC01088-211ENST00000515597 HEBP1Q9NRV9 189 aa2.05□□□□□ -2.08
LINC01088-211ENST00000515597 ADAM28Q9UKQ2 775 aa2.05□□□□□ -2.08
LINC01088-211ENST00000515597 ISY1Q9ULR0 285 aaKnown RBP2.05□□□□□ -2.08
LINC01088-211ENST00000515597 YTHDF2Q9Y5A9 579 aaKnown RBP2.05□□□□□ -2.08
LINC01088-211ENST00000515597 F11RQ9Y624 299 aaKnown RBP2.05□□□□□ -2.08
LINC01088-211ENST00000515597 LOXHD1Q8IVV2 1947 aa2.05□□□□□ -2.08
LINC01088-211ENST00000515597 CSMD2Q7Z408 3487 aa2.04□□□□□ -2.08
LINC01088-211ENST00000515597 IGLV3-22A0A075B6J6 115 aa2.04□□□□□ -2.08
LINC01088-211ENST00000515597 IGHV3-66A0A0C4DH42 116 aa2.04□□□□□ -2.08
LINC01088-211ENST00000515597 A0A1W2PP18 115 aa2.04□□□□□ -2.08
LINC01088-211ENST00000515597 INS-IGF2F8WCM5 200 aa2.04□□□□□ -2.08
LINC01088-211ENST00000515597 DYNC1I1O14576 645 aa2.04□□□□□ -2.08
LINC01088-211ENST00000515597 FCMRO60667 390 aa2.04□□□□□ -2.08
LINC01088-211ENST00000515597 ERLIN2O94905 339 aa2.04□□□□□ -2.08
LINC01088-211ENST00000515597 C6orf47O95873 294 aa2.04□□□□□ -2.08
LINC01088-211ENST00000515597 PGAM1P18669 254 aa2.04□□□□□ -2.08
LINC01088-211ENST00000515597 MAGEA8P43361 318 aa2.04□□□□□ -2.08
LINC01088-211ENST00000515597 NPBWR2P48146 333 aa2.04□□□□□ -2.08
LINC01088-211ENST00000515597 IFNAR2P48551 515 aa2.04□□□□□ -2.08
LINC01088-211ENST00000515597 LY6EQ16553 131 aa2.04□□□□□ -2.08
LINC01088-211ENST00000515597 LINC00303Q3SY05 128 aa2.04□□□□□ -2.08
LINC01088-211ENST00000515597 IGFL1Q6UW32 110 aa2.04□□□□□ -2.08
LINC01088-211ENST00000515597 TMEM135Q86UB9 458 aa2.04□□□□□ -2.08
LINC01088-211ENST00000515597 PGAM4Q8N0Y7 254 aa2.04□□□□□ -2.08
LINC01088-211ENST00000515597 RNF182Q8N6D2 247 aa2.04□□□□□ -2.08
LINC01088-211ENST00000515597 BOD1L1Q8NFC6 3051 aa2.04□□□□□ -2.08
LINC01088-211ENST00000515597 OR10G4Q8NGN3 311 aa2.04□□□□□ -2.08
LINC01088-211ENST00000515597 SCFD1Q8WVM8 642 aa2.04□□□□□ -2.08
LINC01088-211ENST00000515597 AHCTF1Q8WYP5 2266 aa2.04□□□□□ -2.08
LINC01088-211ENST00000515597 SGK3Q96BR1 496 aa2.04□□□□□ -2.08
LINC01088-211ENST00000515597 C10orf35Q96D05 121 aa2.04□□□□□ -2.08
LINC01088-211ENST00000515597 HSFY1Q96LI6 401 aa2.04□□□□□ -2.08
LINC01088-211ENST00000515597 LINC00477Q96M19 166 aa2.04□□□□□ -2.08
LINC01088-211ENST00000515597 MTMR9Q96QG7 549 aa2.04□□□□□ -2.08
LINC01088-211ENST00000515597 CCT7Q99832 543 aa2.04□□□□□ -2.08
LINC01088-211ENST00000515597 SH3GL3Q99963 347 aa2.04□□□□□ -2.08
LINC01088-211ENST00000515597 GABARAPL3Q9BY60 117 aa2.04□□□□□ -2.08
LINC01088-211ENST00000515597 NMRAL1Q9HBL8 299 aa2.04□□□□□ -2.08
LINC01088-211ENST00000515597 SLC38A10Q9HBR0 1119 aa2.04□□□□□ -2.08
LINC01088-211ENST00000515597 TLN1Q9Y490 2541 aaKnown RBP2.03□□□□□ -2.08
LINC01088-211ENST00000515597 MED13LQ71F56 2210 aa2.03□□□□□ -2.08
LINC01088-211ENST00000515597 CABIN1Q9Y6J0 2220 aa2.03□□□□□ -2.08
LINC01088-211ENST00000515597 PCDH15Q96QU1 1955 aa2.03□□□□□ -2.08
LINC01088-211ENST00000515597 MYH1P12882 1939 aa2.03□□□□□ -2.08
LINC01088-211ENST00000515597 A0A0B4J2A0 478 aa2.03□□□□□ -2.08
LINC01088-211ENST00000515597 CIB4A0PJX0 185 aa2.03□□□□□ -2.08
LINC01088-211ENST00000515597 TIMM8AO60220 97 aaPredicted RBP2.03□□□□□ -2.08
LINC01088-211ENST00000515597 MTX2O75431 263 aa2.03□□□□□ -2.08
LINC01088-211ENST00000515597 C2P06681 752 aa2.03□□□□□ -2.08
LINC01088-211ENST00000515597 NCK1P16333 377 aa2.03□□□□□ -2.08
LINC01088-211ENST00000515597 PSMC3P17980 439 aa2.03□□□□□ -2.08
LINC01088-211ENST00000515597 BCKDHBP21953 392 aa2.03□□□□□ -2.08
LINC01088-211ENST00000515597 AK4P27144 223 aaPredicted RBP2.03□□□□□ -2.08
LINC01088-211ENST00000515597 CD52P31358 61 aa2.03□□□□□ -2.08
LINC01088-211ENST00000515597 ATP5C1P36542 298 aaKnown RBP2.03□□□□□ -2.08
LINC01088-211ENST00000515597 CXCL12P48061 93 aa2.03□□□□□ -2.08
LINC01088-211ENST00000515597 RPS21P63220 83 aaKnown RBP2.03□□□□□ -2.08
LINC01088-211ENST00000515597 SLC7A9P82251 487 aa2.03□□□□□ -2.08
LINC01088-211ENST00000515597 IMMTQ16891 758 aaKnown RBP2.03□□□□□ -2.08
LINC01088-211ENST00000515597 ABCA11PQ4W5N1 156 aa2.03□□□□□ -2.08
LINC01088-211ENST00000515597 HES5Q5TA89 166 aa2.03□□□□□ -2.08
LINC01088-211ENST00000515597 PMF1Q6P1K2 205 aa2.03□□□□□ -2.08
LINC01088-211ENST00000515597 LRRC74BQ6ZQY2 392 aa2.03□□□□□ -2.08
LINC01088-211ENST00000515597 FAM92BQ6ZTR7 304 aa2.03□□□□□ -2.08
LINC01088-211ENST00000515597 TMEM179Q6ZVK1 233 aa2.03□□□□□ -2.08
LINC01088-211ENST00000515597 STRADAQ7RTN6 431 aa2.03□□□□□ -2.08
LINC01088-211ENST00000515597 DHDDSQ86SQ9 333 aa2.03□□□□□ -2.08
LINC01088-211ENST00000515597 TGIF2LXQ8IUE1 241 aa2.03□□□□□ -2.08
LINC01088-211ENST00000515597 ARRDC1Q8N5I2 433 aa2.03□□□□□ -2.08
LINC01088-211ENST00000515597 CEP112Q8N8E3 955 aa2.03□□□□□ -2.08
LINC01088-211ENST00000515597 ZNF557Q8N988 423 aaPredicted RBP2.03□□□□□ -2.08
LINC01088-211ENST00000515597 OR2G2Q8NGZ5 317 aa2.03□□□□□ -2.08
LINC01088-211ENST00000515597 ITFG1Q8TB96 612 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms