RNA–Protein interactions for RNA: ENST00000515572.5

SNF8-215, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 687 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-215ENST00000515572 RSPO1Q2MKA7 263 aaPredicted RBP10.24□□□□□ -0.77
SNF8-215ENST00000515572 ZNF718Q3SXZ3 478 aa10.24□□□□□ -0.77
SNF8-215ENST00000515572 C11orf71Q6IPW1 123 aa10.24□□□□□ -0.77
SNF8-215ENST00000515572 DEGS2Q6QHC5 323 aa10.24□□□□□ -0.77
SNF8-215ENST00000515572 COLCA1Q6ZS62 124 aa10.24□□□□□ -0.77
SNF8-215ENST00000515572 SLC35F2Q8IXU6 374 aa10.24□□□□□ -0.77
SNF8-215ENST00000515572 OR2T27Q8NH04 317 aa10.24□□□□□ -0.77
SNF8-215ENST00000515572 SYNPRQ8TBG9 265 aa10.24□□□□□ -0.77
SNF8-215ENST00000515572 ZNF799Q96GE5 643 aa10.24□□□□□ -0.77
SNF8-215ENST00000515572 C1QTNF5Q9BXJ0 243 aa10.24□□□□□ -0.77
SNF8-215ENST00000515572 NIPAL2Q9H841 368 aa10.24□□□□□ -0.77
SNF8-215ENST00000515572 GPR160Q9UJ42 338 aa10.24□□□□□ -0.77
SNF8-215ENST00000515572 PMF1-BGLAPU3KQ54 211 aa10.24□□□□□ -0.77
SNF8-215ENST00000515572 PDZD2O15018 2839 aa10.24□□□□□ -0.77
SNF8-215ENST00000515572 IGLV3-9A0A075B6K5 115 aa10.23□□□□□ -0.77
SNF8-215ENST00000515572 ZNF670-ZNF695F2Z2N8 137 aa10.23□□□□□ -0.77
SNF8-215ENST00000515572 ZNF254O75437 659 aa10.23□□□□□ -0.77
SNF8-215ENST00000515572 NGFP01138 241 aa10.23□□□□□ -0.77
SNF8-215ENST00000515572 PAX1P15863 534 aa10.23□□□□□ -0.77
SNF8-215ENST00000515572 GCH1P30793 250 aa10.23□□□□□ -0.77
SNF8-215ENST00000515572 OPRL1P41146 370 aa10.23□□□□□ -0.77
SNF8-215ENST00000515572 KLF3P57682 345 aaPredicted RBP10.23□□□□□ -0.77
SNF8-215ENST00000515572 ROM1Q03395 351 aa10.23□□□□□ -0.77
SNF8-215ENST00000515572 MAD2L1BPQ15013 274 aaPredicted RBP10.23□□□□□ -0.77
SNF8-215ENST00000515572 MST1LQ2TV78 715 aa10.23□□□□□ -0.77
SNF8-215ENST00000515572 DEFB113Q30KQ7 82 aa10.23□□□□□ -0.77
SNF8-215ENST00000515572 MBNL2Q5VZF2 373 aaKnown RBP10.23□□□□□ -0.77
SNF8-215ENST00000515572 KRT77Q7Z794 578 aa10.23□□□□□ -0.77
SNF8-215ENST00000515572 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.23□□□□□ -0.77
SNF8-215ENST00000515572 C8orf59Q8N0T1 100 aaPredicted RBP10.23□□□□□ -0.77
SNF8-215ENST00000515572 OR51G2Q8NGK0 314 aa10.23□□□□□ -0.77
SNF8-215ENST00000515572 TFAP2CQ92754 450 aa10.23□□□□□ -0.77
SNF8-215ENST00000515572 TRMT61AQ96FX7 289 aaKnown RBP10.23□□□□□ -0.77
SNF8-215ENST00000515572 MARS2Q96GW9 593 aaKnown RBP10.23□□□□□ -0.77
SNF8-215ENST00000515572 OR8B4Q96RC9 309 aa10.23□□□□□ -0.77
SNF8-215ENST00000515572 AMELYQ99218 206 aa10.23□□□□□ -0.77
SNF8-215ENST00000515572 MROQ9BYG7 248 aa10.23□□□□□ -0.77
SNF8-215ENST00000515572 MRPL37Q9BZE1 423 aaKnown RBP10.23□□□□□ -0.77
SNF8-215ENST00000515572 SP140LQ9H930 580 aa10.23□□□□□ -0.77
SNF8-215ENST00000515572 ZNF701Q9NV72 531 aaPredicted RBP10.23□□□□□ -0.77
SNF8-215ENST00000515572 DUSP13Q9UII6 198 aa10.23□□□□□ -0.77
SNF8-215ENST00000515572 KLHDC2Q9Y2U9 406 aa10.23□□□□□ -0.77
SNF8-215ENST00000515572 RPL36Q9Y3U8 105 aaKnown RBP10.23□□□□□ -0.77
SNF8-215ENST00000515572 PCDHGB1Q9Y5G3 927 aa10.23□□□□□ -0.77
SNF8-215ENST00000515572 AKAP6Q13023 2319 aa10.23□□□□□ -0.77
SNF8-215ENST00000515572 SPG11Q96JI7 2443 aa10.23□□□□□ -0.77
SNF8-215ENST00000515572 ARFGEF3Q5TH69 2177 aa10.22□□□□□ -0.77
SNF8-215ENST00000515572 H7C417 338 aa10.22□□□□□ -0.77
SNF8-215ENST00000515572 CLIC3O95833 236 aa10.22□□□□□ -0.77
SNF8-215ENST00000515572 MT-ND5P03915 603 aa10.22□□□□□ -0.77
SNF8-215ENST00000515572 LCATP04180 440 aa10.22□□□□□ -0.77
SNF8-215ENST00000515572 DCTDP32321 178 aa10.22□□□□□ -0.77
SNF8-215ENST00000515572 SLC6A9P48067 706 aa10.22□□□□□ -0.77
SNF8-215ENST00000515572 HSPA13P48723 471 aa10.22□□□□□ -0.77
SNF8-215ENST00000515572 PPOXP50336 477 aa10.22□□□□□ -0.77
SNF8-215ENST00000515572 PRKXP51817 358 aa10.22□□□□□ -0.77
SNF8-215ENST00000515572 AQP4P55087 323 aa10.22□□□□□ -0.77
SNF8-215ENST00000515572 ISL1P61371 349 aa10.22□□□□□ -0.77
SNF8-215ENST00000515572 ERVS71-1P61550 626 aa10.22□□□□□ -0.77
SNF8-215ENST00000515572 ACTC1P68032 377 aa10.22□□□□□ -0.77
SNF8-215ENST00000515572 ACTA1P68133 377 aa10.22□□□□□ -0.77
SNF8-215ENST00000515572 EGR3Q06889 387 aa10.22□□□□□ -0.77
SNF8-215ENST00000515572 MALLQ13021 153 aa10.22□□□□□ -0.77
SNF8-215ENST00000515572 SPATC1Q76KD6 591 aa10.22□□□□□ -0.77
SNF8-215ENST00000515572 LRRC75A-AS1Q8N1F1 130 aa10.22□□□□□ -0.77
SNF8-215ENST00000515572 ZNF283Q8N7M2 679 aa10.22□□□□□ -0.77
SNF8-215ENST00000515572 SLC25A40Q8TBP6 338 aa10.22□□□□□ -0.77
SNF8-215ENST00000515572 KLF14Q8TD94 323 aaPredicted RBP10.22□□□□□ -0.77
SNF8-215ENST00000515572 RNFT2Q96EX2 444 aa10.22□□□□□ -0.77
SNF8-215ENST00000515572 DOK1Q99704 481 aa10.22□□□□□ -0.77
SNF8-215ENST00000515572 FOXC2Q99958 501 aa10.22□□□□□ -0.77
SNF8-215ENST00000515572 SYT3Q9BQG1 590 aa10.22□□□□□ -0.77
SNF8-215ENST00000515572 CACNG6Q9BXT2 260 aa10.22□□□□□ -0.77
SNF8-215ENST00000515572 GSX2Q9BZM3 304 aa10.22□□□□□ -0.77
SNF8-215ENST00000515572 OR2J1Q9GZK6 312 aa10.22□□□□□ -0.77
SNF8-215ENST00000515572 SLCO1C1Q9NYB5 712 aa10.22□□□□□ -0.77
SNF8-215ENST00000515572 CGGBP1Q9UFW8 167 aaPredicted RBP10.22□□□□□ -0.77
SNF8-215ENST00000515572 STARD10Q9Y365 291 aa10.22□□□□□ -0.77
SNF8-215ENST00000515572 POLQO75417 2590 aa10.21□□□□□ -0.77
SNF8-215ENST00000515572 A0A1W2PPW3 197 aa10.21□□□□□ -0.77
SNF8-215ENST00000515572 TMEM129A0AVI4 362 aa10.21□□□□□ -0.77
SNF8-215ENST00000515572 CYSRT1A8MQ03 144 aa10.21□□□□□ -0.77
SNF8-215ENST00000515572 M0R233 179 aa10.21□□□□□ -0.77
SNF8-215ENST00000515572 IGHV3-13P01766 116 aa10.21□□□□□ -0.77
SNF8-215ENST00000515572 ERCC1P07992 297 aaPredicted RBP10.21□□□□□ -0.77
SNF8-215ENST00000515572 DBTP11182 482 aaKnown RBP10.21□□□□□ -0.77
SNF8-215ENST00000515572 RAC2P15153 192 aa10.21□□□□□ -0.77
SNF8-215ENST00000515572 LIPAP38571 399 aa10.21□□□□□ -0.77
SNF8-215ENST00000515572 VHLP40337 213 aa10.21□□□□□ -0.77
SNF8-215ENST00000515572 PTH2RP49190 550 aa10.21□□□□□ -0.77
SNF8-215ENST00000515572 CX3CR1P49238 355 aa10.21□□□□□ -0.77
SNF8-215ENST00000515572 HCCSP53701 268 aa10.21□□□□□ -0.77
SNF8-215ENST00000515572 PSMA6P60900 246 aaKnown RBP10.21□□□□□ -0.77
SNF8-215ENST00000515572 CXCR4P61073 352 aa10.21□□□□□ -0.77
SNF8-215ENST00000515572 ZNF91Q05481 1191 aa10.21□□□□□ -0.77
SNF8-215ENST00000515572 MSMPQ1L6U9 139 aa10.21□□□□□ -0.77
SNF8-215ENST00000515572 SPATA46Q5T0L3 261 aa10.21□□□□□ -0.77
SNF8-215ENST00000515572 ZNF322Q6U7Q0 402 aaPredicted RBP10.21□□□□□ -0.77
SNF8-215ENST00000515572 LRRN1Q6UXK5 716 aa10.21□□□□□ -0.77
SNF8-215ENST00000515572 FBXW12Q6X9E4 464 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms