RNA–Protein interactions for RNA: ENST00000514901.5

NUP54-216, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 500 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-216ENST00000514901 KCNJ15Q99712 375 aa12.25□□□□□ -0.45
NUP54-216ENST00000514901 SYT3Q9BQG1 590 aa12.25□□□□□ -0.45
NUP54-216ENST00000514901 COPS4Q9BT78 406 aa12.25□□□□□ -0.45
NUP54-216ENST00000514901 ABHD6Q9BV23 337 aa12.25□□□□□ -0.45
NUP54-216ENST00000514901 C1QTNF5Q9BXJ0 243 aa12.25□□□□□ -0.45
NUP54-216ENST00000514901 OR2J1Q9GZK6 312 aa12.25□□□□□ -0.45
NUP54-216ENST00000514901 RAB1BQ9H0U4 201 aa12.25□□□□□ -0.45
NUP54-216ENST00000514901 VCXQ9H320 206 aa12.25□□□□□ -0.45
NUP54-216ENST00000514901 MS4A5Q9H3V2 200 aa12.25□□□□□ -0.45
NUP54-216ENST00000514901 DYNLRB1Q9NP97 96 aa12.25□□□□□ -0.45
NUP54-216ENST00000514901 FAM118AQ9NWS6 357 aa12.25□□□□□ -0.45
NUP54-216ENST00000514901 A0A1W2PPW3 197 aa12.24□□□□□ -0.45
NUP54-216ENST00000514901 M0R129 80 aa12.24□□□□□ -0.45
NUP54-216ENST00000514901 M0R135 149 aa12.24□□□□□ -0.45
NUP54-216ENST00000514901 M0R233 179 aa12.24□□□□□ -0.45
NUP54-216ENST00000514901 SELENOFO60613 162 aa12.24□□□□□ -0.45
NUP54-216ENST00000514901 MT-ND5P03915 603 aa12.24□□□□□ -0.45
NUP54-216ENST00000514901 LYNP07948 512 aa12.24□□□□□ -0.45
NUP54-216ENST00000514901 PSKH1P11801 424 aa12.24□□□□□ -0.45
NUP54-216ENST00000514901 ALOX5APP20292 161 aa12.24□□□□□ -0.45
NUP54-216ENST00000514901 PEX2P28328 305 aa12.24□□□□□ -0.45
NUP54-216ENST00000514901 OTX1P32242 354 aaPredicted RBP12.24□□□□□ -0.45
NUP54-216ENST00000514901 ERVS71-1P61550 626 aa12.24□□□□□ -0.45
NUP54-216ENST00000514901 SLC34A1Q06495 639 aa12.24□□□□□ -0.45
NUP54-216ENST00000514901 POU4F2Q12837 409 aa12.24□□□□□ -0.45
NUP54-216ENST00000514901 OCLNQ16625 522 aa12.24□□□□□ -0.45
NUP54-216ENST00000514901 LRRC36Q1X8D7 754 aa12.24□□□□□ -0.45
NUP54-216ENST00000514901 OGFRL1Q5TC84 451 aaPredicted RBP12.24□□□□□ -0.45
NUP54-216ENST00000514901 LPCAT4Q643R3 524 aa12.24□□□□□ -0.45
NUP54-216ENST00000514901 DRAM2Q6UX65 266 aa12.24□□□□□ -0.45
NUP54-216ENST00000514901 COLCA1Q6ZS62 124 aa12.24□□□□□ -0.45
NUP54-216ENST00000514901 LRP11Q86VZ4 500 aa12.24□□□□□ -0.45
NUP54-216ENST00000514901 THEM6Q8WUY1 208 aa12.24□□□□□ -0.45
NUP54-216ENST00000514901 ASB17Q8WXJ9 295 aa12.24□□□□□ -0.45
NUP54-216ENST00000514901 ZNF799Q96GE5 643 aa12.24□□□□□ -0.45
NUP54-216ENST00000514901 Q96MT0 163 aa12.24□□□□□ -0.45
NUP54-216ENST00000514901 ZNF582Q96NG8 517 aaPredicted RBP12.24□□□□□ -0.45
NUP54-216ENST00000514901 SP140LQ9H930 580 aa12.24□□□□□ -0.45
NUP54-216ENST00000514901 TAAR3PQ9P1P4 343 aa12.24□□□□□ -0.45
NUP54-216ENST00000514901 LAMP5Q9UJQ1 280 aa12.24□□□□□ -0.45
NUP54-216ENST00000514901 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.24□□□□□ -0.45
NUP54-216ENST00000514901 FZR1Q9UM11 496 aa12.24□□□□□ -0.45
NUP54-216ENST00000514901 STARD10Q9Y365 291 aa12.24□□□□□ -0.45
NUP54-216ENST00000514901 PHYHO14832 338 aa12.23□□□□□ -0.45
NUP54-216ENST00000514901 F12P00748 615 aaPredicted RBP12.23□□□□□ -0.45
NUP54-216ENST00000514901 LCATP04180 440 aa12.23□□□□□ -0.45
NUP54-216ENST00000514901 NAA10P41227 235 aaPredicted RBP12.23□□□□□ -0.45
NUP54-216ENST00000514901 EFNA4P52798 201 aa12.23□□□□□ -0.45
NUP54-216ENST00000514901 MALLQ13021 153 aa12.23□□□□□ -0.45
NUP54-216ENST00000514901 NKPD1Q17RQ9 610 aa12.23□□□□□ -0.45
NUP54-216ENST00000514901 SPATA46Q5T0L3 261 aa12.23□□□□□ -0.45
NUP54-216ENST00000514901 TTC23Q5W5X9 447 aa12.23□□□□□ -0.45
NUP54-216ENST00000514901 KCTD18Q6PI47 426 aaPredicted RBP12.23□□□□□ -0.45
NUP54-216ENST00000514901 DEGS2Q6QHC5 323 aa12.23□□□□□ -0.45
NUP54-216ENST00000514901 ZNF771Q7L3S4 317 aaPredicted RBP12.23□□□□□ -0.45
NUP54-216ENST00000514901 BCDIN3DQ7Z5W3 292 aaKnown RBP12.23□□□□□ -0.45
NUP54-216ENST00000514901 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.23□□□□□ -0.45
NUP54-216ENST00000514901 SNX33Q8WV41 574 aa12.23□□□□□ -0.45
NUP54-216ENST00000514901 NEU4Q8WWR8 484 aaPredicted RBP12.23□□□□□ -0.45
NUP54-216ENST00000514901 VRK1Q99986 396 aaPredicted RBP12.23□□□□□ -0.45
NUP54-216ENST00000514901 APOL4Q9BPW4 351 aa12.23□□□□□ -0.45
NUP54-216ENST00000514901 NIPAL2Q9H841 368 aa12.23□□□□□ -0.45
NUP54-216ENST00000514901 RNPEPL1Q9HAU8 725 aa12.23□□□□□ -0.45
NUP54-216ENST00000514901 CYSLTR2Q9NS75 346 aa12.23□□□□□ -0.45
NUP54-216ENST00000514901 CGGBP1Q9UFW8 167 aaPredicted RBP12.23□□□□□ -0.45
NUP54-216ENST00000514901 DLGAP1O14490 977 aa12.22□□□□□ -0.45
NUP54-216ENST00000514901 CLPTM1O96005 669 aa12.22□□□□□ -0.45
NUP54-216ENST00000514901 IGHV4-39P01824 125 aa12.22□□□□□ -0.45
NUP54-216ENST00000514901 ADRA2AP08913 450 aa12.22□□□□□ -0.45
NUP54-216ENST00000514901 H2BFMP0C1H6 154 aa12.22□□□□□ -0.45
NUP54-216ENST00000514901 RAC2P15153 192 aa12.22□□□□□ -0.45
NUP54-216ENST00000514901 HSD11B1P28845 292 aa12.22□□□□□ -0.45
NUP54-216ENST00000514901 OPRL1P41146 370 aa12.22□□□□□ -0.45
NUP54-216ENST00000514901 SLC6A9P48067 706 aa12.22□□□□□ -0.45
NUP54-216ENST00000514901 DSCR9P59020 149 aa12.22□□□□□ -0.45
NUP54-216ENST00000514901 Q5PR19 223 aa12.22□□□□□ -0.45
NUP54-216ENST00000514901 FBXW12Q6X9E4 464 aa12.22□□□□□ -0.45
NUP54-216ENST00000514901 RHOXF1Q8NHV9 184 aa12.22□□□□□ -0.45
NUP54-216ENST00000514901 UBE2FQ969M7 185 aa12.22□□□□□ -0.45
NUP54-216ENST00000514901 HAVCR1Q96D42 359 aa12.22□□□□□ -0.45
NUP54-216ENST00000514901 CMBLQ96DG6 245 aa12.22□□□□□ -0.45
NUP54-216ENST00000514901 ADGRL4Q9HBW9 690 aa12.22□□□□□ -0.45
NUP54-216ENST00000514901 CLN6Q9NWW5 311 aa12.22□□□□□ -0.45
NUP54-216ENST00000514901 DNAJC27Q9NZQ0 273 aa12.22□□□□□ -0.45
NUP54-216ENST00000514901 PLSCR5A0PG75 271 aa12.21□□□□□ -0.45
NUP54-216ENST00000514901 ZNF254O75437 659 aa12.21□□□□□ -0.45
NUP54-216ENST00000514901 MRPL3P09001 348 aaKnown RBP12.21□□□□□ -0.45
NUP54-216ENST00000514901 SBK2P0C263 348 aa12.21□□□□□ -0.45
NUP54-216ENST00000514901 OR2T7P0C7T2 308 aa12.21□□□□□ -0.45
NUP54-216ENST00000514901 SELEP16581 610 aa12.21□□□□□ -0.45
NUP54-216ENST00000514901 KITLGP21583 273 aa12.21□□□□□ -0.45
NUP54-216ENST00000514901 ATP6V1E1P36543 226 aa12.21□□□□□ -0.45
NUP54-216ENST00000514901 MPV17P39210 176 aa12.21□□□□□ -0.45
NUP54-216ENST00000514901 ALDH3B1P43353 468 aa12.21□□□□□ -0.45
NUP54-216ENST00000514901 PRKXP51817 358 aa12.21□□□□□ -0.45
NUP54-216ENST00000514901 PSG7Q13046 419 aa12.21□□□□□ -0.45
NUP54-216ENST00000514901 PCGF3Q3KNV8 242 aa12.21□□□□□ -0.45
NUP54-216ENST00000514901 ZMAT1Q5H9K5 638 aa12.21□□□□□ -0.45
NUP54-216ENST00000514901 SPATC1Q76KD6 591 aa12.21□□□□□ -0.45
NUP54-216ENST00000514901 KRT77Q7Z794 578 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms