RNA–Protein interactions for RNA: ENST00000513957.1

NEDD4-210, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-210ENST00000513957 NKIRAS2Q9NYR9 191 aa7.03□□□□□ -1.28
NEDD4-210ENST00000513957 OAZ3Q9UMX2 235 aa7.03□□□□□ -1.28
NEDD4-210ENST00000513957 SF3B6Q9Y3B4 125 aaKnown RBP7.03□□□□□ -1.28
NEDD4-210ENST00000513957 ORC6Q9Y5N6 252 aa7.03□□□□□ -1.28
NEDD4-210ENST00000513957 CR1P17927 2039 aa7.03□□□□□ -1.28
NEDD4-210ENST00000513957 A0A1W2PPW3 197 aa7.02□□□□□ -1.29
NEDD4-210ENST00000513957 LOC390937A0A1W2PQ73 354 aa7.02□□□□□ -1.29
NEDD4-210ENST00000513957 TMEM129A0AVI4 362 aa7.02□□□□□ -1.29
NEDD4-210ENST00000513957 ZAR1LA6NP61 321 aa7.02□□□□□ -1.29
NEDD4-210ENST00000513957 ZNF878C9JN71 531 aa7.02□□□□□ -1.29
NEDD4-210ENST00000513957 RER1O15258 196 aa7.02□□□□□ -1.29
NEDD4-210ENST00000513957 SHOXO15266 292 aa7.02□□□□□ -1.29
NEDD4-210ENST00000513957 MPZL1O95297 269 aa7.02□□□□□ -1.29
NEDD4-210ENST00000513957 APOC1P02654 83 aa7.02□□□□□ -1.29
NEDD4-210ENST00000513957 ADH4P08319 380 aa7.02□□□□□ -1.29
NEDD4-210ENST00000513957 IGFBP1P08833 259 aaPredicted RBP7.02□□□□□ -1.29
NEDD4-210ENST00000513957 CCL2P13500 99 aa7.02□□□□□ -1.29
NEDD4-210ENST00000513957 SLC25A16P16260 332 aa7.02□□□□□ -1.29
NEDD4-210ENST00000513957 PRKACGP22612 351 aa7.02□□□□□ -1.29
NEDD4-210ENST00000513957 CALRP27797 417 aaKnown RBP7.02□□□□□ -1.29
NEDD4-210ENST00000513957 POU1F1P28069 291 aa7.02□□□□□ -1.29
NEDD4-210ENST00000513957 OTX1P32242 354 aaPredicted RBP7.02□□□□□ -1.29
NEDD4-210ENST00000513957 WNT5AP41221 380 aa7.02□□□□□ -1.29
NEDD4-210ENST00000513957 SLC15A1P46059 708 aa7.02□□□□□ -1.29
NEDD4-210ENST00000513957 ERFP50548 548 aa7.02□□□□□ -1.29
NEDD4-210ENST00000513957 RAD23AP54725 363 aa7.02□□□□□ -1.29
NEDD4-210ENST00000513957 PPP1CBP62140 327 aa7.02□□□□□ -1.29
NEDD4-210ENST00000513957 ID3Q02535 119 aa7.02□□□□□ -1.29
NEDD4-210ENST00000513957 PTGES3Q15185 160 aaKnown RBP7.02□□□□□ -1.29
NEDD4-210ENST00000513957 CCDC92Q53HC0 331 aaPredicted RBP7.02□□□□□ -1.29
NEDD4-210ENST00000513957 LINC01590Q5TEZ4 76 aa7.02□□□□□ -1.29
NEDD4-210ENST00000513957 LCN1P1Q5VSP4 162 aa7.02□□□□□ -1.29
NEDD4-210ENST00000513957 SLX4IPQ5VYV7 408 aa7.02□□□□□ -1.29
NEDD4-210ENST00000513957 KRT77Q7Z794 578 aa7.02□□□□□ -1.29
NEDD4-210ENST00000513957 BIVMQ86UB2 503 aa7.02□□□□□ -1.29
NEDD4-210ENST00000513957 LURAP1LQ8IV03 231 aa7.02□□□□□ -1.29
NEDD4-210ENST00000513957 ZNF101Q8IZC7 436 aa7.02□□□□□ -1.29
NEDD4-210ENST00000513957 OR6K6Q8NGW6 343 aa7.02□□□□□ -1.29
NEDD4-210ENST00000513957 ABHD4Q8TB40 342 aa7.02□□□□□ -1.29
NEDD4-210ENST00000513957 KLF14Q8TD94 323 aaPredicted RBP7.02□□□□□ -1.29
NEDD4-210ENST00000513957 PYDC1Q8WXC3 89 aa7.02□□□□□ -1.29
NEDD4-210ENST00000513957 STMN2Q93045 179 aa7.02□□□□□ -1.29
NEDD4-210ENST00000513957 SPTSSAQ969W0 71 aa7.02□□□□□ -1.29
NEDD4-210ENST00000513957 WDR89Q96FK6 387 aaPredicted RBP7.02□□□□□ -1.29
NEDD4-210ENST00000513957 MARS2Q96GW9 593 aaKnown RBP7.02□□□□□ -1.29
NEDD4-210ENST00000513957 SORCS2Q96PQ0 1159 aa7.02□□□□□ -1.29
NEDD4-210ENST00000513957 INTS14Q96SY0 518 aa7.02□□□□□ -1.29
NEDD4-210ENST00000513957 PITX2Q99697 317 aa7.02□□□□□ -1.29
NEDD4-210ENST00000513957 RHNO1Q9BSD3 238 aa7.02□□□□□ -1.29
NEDD4-210ENST00000513957 OPA3Q9H6K4 179 aa7.02□□□□□ -1.29
NEDD4-210ENST00000513957 SP140LQ9H930 580 aa7.02□□□□□ -1.29
NEDD4-210ENST00000513957 C8orf4Q9NR00 106 aa7.02□□□□□ -1.29
NEDD4-210ENST00000513957 MRPL22Q9NWU5 206 aaKnown RBP7.02□□□□□ -1.29
NEDD4-210ENST00000513957 USE1Q9NZ43 259 aa7.02□□□□□ -1.29
NEDD4-210ENST00000513957 YLPM1P49750 1951 aaKnown RBP7.02□□□□□ -1.29
NEDD4-210ENST00000513957 FLNAP21333 2647 aaKnown RBP7.01□□□□□ -1.29
NEDD4-210ENST00000513957 PLSCR5A0PG75 271 aa7.01□□□□□ -1.29
NEDD4-210ENST00000513957 C17orf100A8MU93 164 aa7.01□□□□□ -1.29
NEDD4-210ENST00000513957 H3BNX3 289 aa7.01□□□□□ -1.29
NEDD4-210ENST00000513957 TUSC2O75896 110 aa7.01□□□□□ -1.29
NEDD4-210ENST00000513957 ALPLP05186 524 aa7.01□□□□□ -1.29
NEDD4-210ENST00000513957 RAC2P15153 192 aa7.01□□□□□ -1.29
NEDD4-210ENST00000513957 SELEP16581 610 aa7.01□□□□□ -1.29
NEDD4-210ENST00000513957 KITLGP21583 273 aa7.01□□□□□ -1.29
NEDD4-210ENST00000513957 PYCR1P32322 319 aa7.01□□□□□ -1.29
NEDD4-210ENST00000513957 PDLIM4P50479 330 aa7.01□□□□□ -1.29
NEDD4-210ENST00000513957 TPTEP56180 551 aa7.01□□□□□ -1.29
NEDD4-210ENST00000513957 GRB2P62993 217 aaKnown RBP7.01□□□□□ -1.29
NEDD4-210ENST00000513957 SNAPC1Q16533 368 aa7.01□□□□□ -1.29
NEDD4-210ENST00000513957 ZSCAN26Q16670 478 aa7.01□□□□□ -1.29
NEDD4-210ENST00000513957 MEP1BQ16820 701 aa7.01□□□□□ -1.29
NEDD4-210ENST00000513957 NKPD1Q17RQ9 610 aa7.01□□□□□ -1.29
NEDD4-210ENST00000513957 MSMPQ1L6U9 139 aa7.01□□□□□ -1.29
NEDD4-210ENST00000513957 NXNL2Q5VZ03 156 aa7.01□□□□□ -1.29
NEDD4-210ENST00000513957 C12orf73Q69YU5 71 aa7.01□□□□□ -1.29
NEDD4-210ENST00000513957 ACSM5Q6NUN0 579 aa7.01□□□□□ -1.29
NEDD4-210ENST00000513957 DRAM2Q6UX65 266 aa7.01□□□□□ -1.29
NEDD4-210ENST00000513957 FBXW12Q6X9E4 464 aa7.01□□□□□ -1.29
NEDD4-210ENST00000513957 CFAP77Q6ZQR2 320 aa7.01□□□□□ -1.29
NEDD4-210ENST00000513957 COLCA1Q6ZS62 124 aa7.01□□□□□ -1.29
NEDD4-210ENST00000513957 RFPL4BQ6ZWI9 263 aa7.01□□□□□ -1.29
NEDD4-210ENST00000513957 CXXC5Q7LFL8 322 aaKnown RBP7.01□□□□□ -1.29
NEDD4-210ENST00000513957 AMIGO2Q86SJ2 522 aa7.01□□□□□ -1.29
NEDD4-210ENST00000513957 GID4Q8IVV7 300 aa7.01□□□□□ -1.29
NEDD4-210ENST00000513957 TIGD4Q8IY51 512 aa7.01□□□□□ -1.29
NEDD4-210ENST00000513957 PQLC1Q8N2U9 271 aa7.01□□□□□ -1.29
NEDD4-210ENST00000513957 IQCF1Q8N6M8 205 aa7.01□□□□□ -1.29
NEDD4-210ENST00000513957 OR9Q1Q8NGQ5 310 aa7.01□□□□□ -1.29
NEDD4-210ENST00000513957 SLC25A40Q8TBP6 338 aa7.01□□□□□ -1.29
NEDD4-210ENST00000513957 TRUB1Q8WWH5 349 aaKnown RBP7.01□□□□□ -1.29
NEDD4-210ENST00000513957 FAM168AQ92567 244 aa7.01□□□□□ -1.29
NEDD4-210ENST00000513957 PTP4A1Q93096 173 aa7.01□□□□□ -1.29
NEDD4-210ENST00000513957 ITFG2Q969R8 447 aa7.01□□□□□ -1.29
NEDD4-210ENST00000513957 FOXN4Q96NZ1 517 aa7.01□□□□□ -1.29
NEDD4-210ENST00000513957 MNTQ99583 582 aa7.01□□□□□ -1.29
NEDD4-210ENST00000513957 CIB1Q99828 191 aa7.01□□□□□ -1.29
NEDD4-210ENST00000513957 VRK1Q99986 396 aaPredicted RBP7.01□□□□□ -1.29
NEDD4-210ENST00000513957 SYT3Q9BQG1 590 aa7.01□□□□□ -1.29
NEDD4-210ENST00000513957 PIMREGQ9BSJ6 248 aa7.01□□□□□ -1.29
NEDD4-210ENST00000513957 C9orf16Q9BUW7 83 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms