RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 F5H5K5 113 aa12.93□□□□□ -0.34
TPM3-219ENST00000509409 H0YL77 283 aa12.93□□□□□ -0.34
TPM3-219ENST00000509409 DCTN6O00399 190 aa12.93□□□□□ -0.34
TPM3-219ENST00000509409 CYB5R3P00387 301 aaPredicted RBP12.93□□□□□ -0.34
TPM3-219ENST00000509409 FSHBP01225 129 aa12.93□□□□□ -0.34
TPM3-219ENST00000509409 HIST1H1CP16403 213 aaKnown RBP12.93□□□□□ -0.34
TPM3-219ENST00000509409 SELEP16581 610 aa12.93□□□□□ -0.34
TPM3-219ENST00000509409 ZNF12P17014 697 aa12.93□□□□□ -0.34
TPM3-219ENST00000509409 IFNGR2P38484 337 aa12.93□□□□□ -0.34
TPM3-219ENST00000509409 MMP16P51512 607 aa12.93□□□□□ -0.34
TPM3-219ENST00000509409 UBA52P62987 128 aaKnown RBP12.93□□□□□ -0.34
TPM3-219ENST00000509409 MOGAT3Q86VF5 341 aa12.93□□□□□ -0.34
TPM3-219ENST00000509409 LINC00346Q8IVM7 164 aa12.93□□□□□ -0.34
TPM3-219ENST00000509409 OR6V1Q8N148 313 aa12.93□□□□□ -0.34
TPM3-219ENST00000509409 BHLHE23Q8NDY6 225 aa12.93□□□□□ -0.34
TPM3-219ENST00000509409 ZMYND19Q96E35 227 aaPredicted RBP12.93□□□□□ -0.34
TPM3-219ENST00000509409 DHRS1Q96LJ7 313 aa12.93□□□□□ -0.34
TPM3-219ENST00000509409 NSRP1Q9H0G5 558 aaKnown RBP12.93□□□□□ -0.34
TPM3-219ENST00000509409 MYLK2Q9H1R3 596 aa12.93□□□□□ -0.34
TPM3-219ENST00000509409 OR52D1Q9H346 318 aa12.93□□□□□ -0.34
TPM3-219ENST00000509409 GORASP2Q9H8Y8 452 aa12.93□□□□□ -0.34
TPM3-219ENST00000509409 RPRD1BQ9NQG5 326 aaKnown RBP12.93□□□□□ -0.34
TPM3-219ENST00000509409 POLR3KQ9Y2Y1 108 aaPredicted RBP12.93□□□□□ -0.34
TPM3-219ENST00000509409 ARHGAP32A7KAX9 2087 aa12.93□□□□□ -0.34
TPM3-219ENST00000509409 IGLV1-36A0A0B4J1U3 117 aa12.92□□□□□ -0.34
TPM3-219ENST00000509409 LRRC30A6NM36 301 aa12.92□□□□□ -0.34
TPM3-219ENST00000509409 CEACAM18A8MTB9 384 aa12.92□□□□□ -0.34
TPM3-219ENST00000509409 F5H0A9 414 aaPredicted RBP12.92□□□□□ -0.34
TPM3-219ENST00000509409 F5H5P2 479 aa12.92□□□□□ -0.34
TPM3-219ENST00000509409 WNT2P09544 360 aa12.92□□□□□ -0.34
TPM3-219ENST00000509409 RPS2P15880 293 aaKnown RBP12.92□□□□□ -0.34
TPM3-219ENST00000509409 FPR3P25089 353 aa12.92□□□□□ -0.34
TPM3-219ENST00000509409 HIST1H3AP68431 136 aa12.92□□□□□ -0.34
TPM3-219ENST00000509409 MALLQ13021 153 aa12.92□□□□□ -0.34
TPM3-219ENST00000509409 HIST2H3PS2Q5TEC6 136 aa12.92□□□□□ -0.34
TPM3-219ENST00000509409 BTNL3Q6UXE8 466 aa12.92□□□□□ -0.34
TPM3-219ENST00000509409 HIST2H3AQ71DI3 136 aa12.92□□□□□ -0.34
TPM3-219ENST00000509409 SGMS2Q8NHU3 365 aa12.92□□□□□ -0.34
TPM3-219ENST00000509409 GNPDA2Q8TDQ7 276 aa12.92□□□□□ -0.34
TPM3-219ENST00000509409 DUX5Q96PT3 197 aa12.92□□□□□ -0.34
TPM3-219ENST00000509409 SLC30A2Q9BRI3 323 aa12.92□□□□□ -0.34
TPM3-219ENST00000509409 FUZQ9BT04 418 aa12.92□□□□□ -0.34
TPM3-219ENST00000509409 MS4A7Q9GZW8 240 aaPredicted RBP12.92□□□□□ -0.34
TPM3-219ENST00000509409 TMEM165Q9HC07 324 aa12.92□□□□□ -0.34
TPM3-219ENST00000509409 ZNF69Q9UC07 566 aa12.92□□□□□ -0.34
TPM3-219ENST00000509409 MIOXQ9UGB7 285 aa12.92□□□□□ -0.34
TPM3-219ENST00000509409 IQCF6A8MYZ5 107 aa12.91□□□□□ -0.34
TPM3-219ENST00000509409 ARPC3O15145 178 aa12.91□□□□□ -0.34
TPM3-219ENST00000509409 SPRY1O43609 319 aaPredicted RBP12.91□□□□□ -0.34
TPM3-219ENST00000509409 LCATP04180 440 aa12.91□□□□□ -0.34
TPM3-219ENST00000509409 IRF2P14316 349 aa12.91□□□□□ -0.34
TPM3-219ENST00000509409 ZNF823P16415 610 aa12.91□□□□□ -0.34
TPM3-219ENST00000509409 MSX2P35548 267 aaPredicted RBP12.91□□□□□ -0.34
TPM3-219ENST00000509409 GNB2P62879 340 aa12.91□□□□□ -0.34
TPM3-219ENST00000509409 DBPQ10586 325 aaPredicted RBP12.91□□□□□ -0.34
TPM3-219ENST00000509409 COX10Q12887 443 aa12.91□□□□□ -0.34
TPM3-219ENST00000509409 ECH1Q13011 328 aa12.91□□□□□ -0.34
TPM3-219ENST00000509409 BAMBIQ13145 260 aa12.91□□□□□ -0.34
TPM3-219ENST00000509409 AWAT1Q58HT5 328 aa12.91□□□□□ -0.34
TPM3-219ENST00000509409 SLC35F1Q5T1Q4 408 aa12.91□□□□□ -0.34
TPM3-219ENST00000509409 CPLX4Q7Z7G2 160 aa12.91□□□□□ -0.34
TPM3-219ENST00000509409 KLBQ86Z14 1044 aa12.91□□□□□ -0.34
TPM3-219ENST00000509409 C1orf87Q8N0U7 546 aa12.91□□□□□ -0.34
TPM3-219ENST00000509409 BCL6BQ8N143 479 aaPredicted RBP12.91□□□□□ -0.34
TPM3-219ENST00000509409 OR52E2Q8NGJ4 325 aa12.91□□□□□ -0.34
TPM3-219ENST00000509409 SLCO4A1Q96BD0 722 aa12.91□□□□□ -0.34
TPM3-219ENST00000509409 PLEKHA8Q96JA3 519 aa12.91□□□□□ -0.34
TPM3-219ENST00000509409 NSMCE2Q96MF7 247 aa12.91□□□□□ -0.34
TPM3-219ENST00000509409 SSBP3Q9BWW4 388 aaPredicted RBP12.91□□□□□ -0.34
TPM3-219ENST00000509409 C1QTNF5Q9BXJ0 243 aa12.91□□□□□ -0.34
TPM3-219ENST00000509409 MAGEL2Q9UJ55 1249 aa12.91□□□□□ -0.34
TPM3-219ENST00000509409 LRCH1Q9Y2L9 728 aa12.91□□□□□ -0.34
TPM3-219ENST00000509409 DYSFO75923 2080 aa12.91□□□□□ -0.34
TPM3-219ENST00000509409 IGHV3OR16-10A0A075B7F0 116 aa12.9□□□□□ -0.34
TPM3-219ENST00000509409 A8MXK9 166 aa12.9□□□□□ -0.34
TPM3-219ENST00000509409 IDH3BO43837 385 aa12.9□□□□□ -0.34
TPM3-219ENST00000509409 HLA-DPB1P04440 258 aa12.9□□□□□ -0.34
TPM3-219ENST00000509409 FABP3P05413 133 aa12.9□□□□□ -0.34
TPM3-219ENST00000509409 ACSM4P0C7M7 580 aa12.9□□□□□ -0.34
TPM3-219ENST00000509409 CPT2P23786 658 aa12.9□□□□□ -0.34
TPM3-219ENST00000509409 RRM2P31350 389 aa12.9□□□□□ -0.34
TPM3-219ENST00000509409 TPTEP56180 551 aa12.9□□□□□ -0.34
TPM3-219ENST00000509409 PRSS12P56730 875 aa12.9□□□□□ -0.34
TPM3-219ENST00000509409 PAX8Q06710 450 aa12.9□□□□□ -0.34
TPM3-219ENST00000509409 RSPO1Q2MKA7 263 aaPredicted RBP12.9□□□□□ -0.34
TPM3-219ENST00000509409 KLF17Q5JT82 389 aaPredicted RBP12.9□□□□□ -0.34
TPM3-219ENST00000509409 SLC18B1Q6NT16 456 aa12.9□□□□□ -0.34
TPM3-219ENST00000509409 LRRN1Q6UXK5 716 aa12.9□□□□□ -0.34
TPM3-219ENST00000509409 CFAP77Q6ZQR2 320 aa12.9□□□□□ -0.34
TPM3-219ENST00000509409 DOK3Q7L591 496 aa12.9□□□□□ -0.34
TPM3-219ENST00000509409 NAA40Q86UY6 237 aa12.9□□□□□ -0.34
TPM3-219ENST00000509409 SDR9C7Q8NEX9 313 aa12.9□□□□□ -0.34
TPM3-219ENST00000509409 SLC26A10Q8NG04 563 aa12.9□□□□□ -0.34
TPM3-219ENST00000509409 SPRYD4Q8WW59 207 aaPredicted RBP12.9□□□□□ -0.34
TPM3-219ENST00000509409 CDRT15Q96T59 188 aa12.9□□□□□ -0.34
TPM3-219ENST00000509409 ATF6BQ99941 703 aa12.9□□□□□ -0.34
TPM3-219ENST00000509409 TMEM246Q9BRR3 403 aa12.9□□□□□ -0.34
TPM3-219ENST00000509409 FN3KQ9H479 309 aa12.9□□□□□ -0.34
TPM3-219ENST00000509409 OR6C68A6NDL8 312 aa12.89□□□□□ -0.35
TPM3-219ENST00000509409 MLNRO43193 412 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms