RNA–Protein interactions for RNA: ENST00000508809.1

COL4A3BP-206, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2

Gene COL4A3BP, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-206ENST00000508809 OPN1SWP03999 348 aa7.18□□□□□ -1.26
COL4A3BP-206ENST00000508809 NR2C1P13056 603 aa7.18□□□□□ -1.26
COL4A3BP-206ENST00000508809 TNFSF4P23510 183 aa7.18□□□□□ -1.26
COL4A3BP-206ENST00000508809 CRYBA2P53672 197 aa7.18□□□□□ -1.26
COL4A3BP-206ENST00000508809 BPIFB3P59826 476 aa7.18□□□□□ -1.26
COL4A3BP-206ENST00000508809 FMODQ06828 376 aa7.18□□□□□ -1.26
COL4A3BP-206ENST00000508809 SRSF4Q08170 494 aaKnown RBP7.18□□□□□ -1.26
COL4A3BP-206ENST00000508809 ENDOGQ14249 297 aaKnown RBP7.18□□□□□ -1.26
COL4A3BP-206ENST00000508809 ESCO2Q56NI9 601 aa7.18□□□□□ -1.26
COL4A3BP-206ENST00000508809 ARL9Q6T311 187 aa7.18□□□□□ -1.26
COL4A3BP-206ENST00000508809 CCDC80Q76M96 950 aa7.18□□□□□ -1.26
COL4A3BP-206ENST00000508809 RHOUQ7L0Q8 258 aa7.18□□□□□ -1.26
COL4A3BP-206ENST00000508809 PATL1Q86TB9 770 aaKnown RBP7.18□□□□□ -1.26
COL4A3BP-206ENST00000508809 NKAIN4Q8IVV8 208 aa7.18□□□□□ -1.26
COL4A3BP-206ENST00000508809 SLC30A8Q8IWU4 369 aa7.18□□□□□ -1.26
COL4A3BP-206ENST00000508809 MUC20Q8N307 709 aaPredicted RBP7.18□□□□□ -1.26
COL4A3BP-206ENST00000508809 MOSPD2Q8NHP6 518 aa7.18□□□□□ -1.26
COL4A3BP-206ENST00000508809 PFN4Q8NHR9 129 aa7.18□□□□□ -1.26
COL4A3BP-206ENST00000508809 VANGL1Q8TAA9 524 aaPredicted RBP7.18□□□□□ -1.26
COL4A3BP-206ENST00000508809 FNDC8Q8TC99 324 aa7.18□□□□□ -1.26
COL4A3BP-206ENST00000508809 C10orf82Q8WW14 230 aa7.18□□□□□ -1.26
COL4A3BP-206ENST00000508809 RASSF5Q8WWW0 418 aa7.18□□□□□ -1.26
COL4A3BP-206ENST00000508809 RAB40AQ8WXH6 277 aa7.18□□□□□ -1.26
COL4A3BP-206ENST00000508809 NSMAFQ92636 917 aa7.18□□□□□ -1.26
COL4A3BP-206ENST00000508809 TAMM41Q96BW9 452 aa7.18□□□□□ -1.26
COL4A3BP-206ENST00000508809 HAVCR1Q96D42 359 aa7.18□□□□□ -1.26
COL4A3BP-206ENST00000508809 SGTBQ96EQ0 304 aa7.18□□□□□ -1.26
COL4A3BP-206ENST00000508809 C7orf26Q96N11 449 aa7.18□□□□□ -1.26
COL4A3BP-206ENST00000508809 RBP7Q96R05 134 aa7.18□□□□□ -1.26
COL4A3BP-206ENST00000508809 CITED1Q99966 193 aa7.18□□□□□ -1.26
COL4A3BP-206ENST00000508809 EBF4Q9BQW3 602 aa7.18□□□□□ -1.26
COL4A3BP-206ENST00000508809 ALG12Q9BV10 488 aa7.18□□□□□ -1.26
COL4A3BP-206ENST00000508809 POLR2J2Q9GZM3 115 aaKnown RBP7.18□□□□□ -1.26
COL4A3BP-206ENST00000508809 POLR2J3Q9H1A7 115 aaKnown RBP7.18□□□□□ -1.26
COL4A3BP-206ENST00000508809 POFUT1Q9H488 388 aa7.18□□□□□ -1.26
COL4A3BP-206ENST00000508809 KAT8Q9H7Z6 458 aaKnown RBP7.18□□□□□ -1.26
COL4A3BP-206ENST00000508809 C20orf141Q9NUB4 165 aa7.18□□□□□ -1.26
COL4A3BP-206ENST00000508809 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.18□□□□□ -1.26
COL4A3BP-206ENST00000508809 OR5V1Q9UGF6 321 aa7.18□□□□□ -1.26
COL4A3BP-206ENST00000508809 RAB21Q9UL25 225 aa7.18□□□□□ -1.26
COL4A3BP-206ENST00000508809 PPP1R3CQ9UQK1 317 aa7.18□□□□□ -1.26
COL4A3BP-206ENST00000508809 KMT2CQ8NEZ4 4911 aaKnown RBP7.18□□□□□ -1.26
COL4A3BP-206ENST00000508809 IGHV2-70DA0A0C4DH43 119 aa7.17□□□□□ -1.26
COL4A3BP-206ENST00000508809 A0A1W2PRX2 142 aa7.17□□□□□ -1.26
COL4A3BP-206ENST00000508809 SRRM5B3KS81 715 aa7.17□□□□□ -1.26
COL4A3BP-206ENST00000508809 HOXA3O43365 443 aaPredicted RBP7.17□□□□□ -1.26
COL4A3BP-206ENST00000508809 NDUFA7O95182 113 aa7.17□□□□□ -1.26
COL4A3BP-206ENST00000508809 GPANK1O95872 356 aa7.17□□□□□ -1.26
COL4A3BP-206ENST00000508809 VIMP08670 466 aaKnown RBP7.17□□□□□ -1.26
COL4A3BP-206ENST00000508809 THRBP10828 461 aa7.17□□□□□ -1.26
COL4A3BP-206ENST00000508809 GSTM3P21266 225 aa7.17□□□□□ -1.26
COL4A3BP-206ENST00000508809 OMGP23515 440 aa7.17□□□□□ -1.26
COL4A3BP-206ENST00000508809 GZMMP51124 257 aa7.17□□□□□ -1.26
COL4A3BP-206ENST00000508809 RPL27P61353 136 aaKnown RBP7.17□□□□□ -1.26
COL4A3BP-206ENST00000508809 CD47Q08722 323 aa7.17□□□□□ -1.26
COL4A3BP-206ENST00000508809 SELPLGQ14242 412 aa7.17□□□□□ -1.26
COL4A3BP-206ENST00000508809 CYP51A1Q16850 503 aa7.17□□□□□ -1.26
COL4A3BP-206ENST00000508809 AGKQ53H12 422 aa7.17□□□□□ -1.26
COL4A3BP-206ENST00000508809 FAM205BPQ63HN1 556 aa7.17□□□□□ -1.26
COL4A3BP-206ENST00000508809 BTNL3Q6UXE8 466 aa7.17□□□□□ -1.26
COL4A3BP-206ENST00000508809 KIR3DL3Q8N743 410 aa7.17□□□□□ -1.26
COL4A3BP-206ENST00000508809 LRRC75AQ8NAA5 344 aa7.17□□□□□ -1.26
COL4A3BP-206ENST00000508809 NPEPL1Q8NDH3 523 aa7.17□□□□□ -1.26
COL4A3BP-206ENST00000508809 OR2Z1Q8NG97 314 aa7.17□□□□□ -1.26
COL4A3BP-206ENST00000508809 OR4F5Q8NH21 305 aa7.17□□□□□ -1.26
COL4A3BP-206ENST00000508809 TMEM255BQ8WV15 326 aa7.17□□□□□ -1.26
COL4A3BP-206ENST00000508809 TMEM239Q8WW34 195 aa7.17□□□□□ -1.26
COL4A3BP-206ENST00000508809 ITLN1Q8WWA0 313 aa7.17□□□□□ -1.26
COL4A3BP-206ENST00000508809 CFHR4Q92496 578 aa7.17□□□□□ -1.26
COL4A3BP-206ENST00000508809 PTP4A1Q93096 173 aa7.17□□□□□ -1.26
COL4A3BP-206ENST00000508809 ZBTB9Q96C00 473 aa7.17□□□□□ -1.26
COL4A3BP-206ENST00000508809 THOC1Q96FV9 657 aaKnown RBP7.17□□□□□ -1.26
COL4A3BP-206ENST00000508809 OR2V2Q96R30 315 aa7.17□□□□□ -1.26
COL4A3BP-206ENST00000508809 CGREF1Q99674 301 aa7.17□□□□□ -1.26
COL4A3BP-206ENST00000508809 MMP27Q9H306 513 aa7.17□□□□□ -1.26
COL4A3BP-206ENST00000508809 BEX1Q9HBH7 125 aa7.17□□□□□ -1.26
COL4A3BP-206ENST00000508809 NOX4Q9NPH5 578 aa7.17□□□□□ -1.26
COL4A3BP-206ENST00000508809 NKIRAS1Q9NYS0 192 aa7.17□□□□□ -1.26
COL4A3BP-206ENST00000508809 H2AFY2Q9P0M6 372 aaPredicted RBP7.17□□□□□ -1.26
COL4A3BP-206ENST00000508809 MIOXQ9UGB7 285 aa7.17□□□□□ -1.26
COL4A3BP-206ENST00000508809 MAGEL2Q9UJ55 1249 aa7.17□□□□□ -1.26
COL4A3BP-206ENST00000508809 RIMS3Q9UJD0 308 aa7.17□□□□□ -1.26
COL4A3BP-206ENST00000508809 NDRG4Q9ULP0 352 aaKnown RBP7.17□□□□□ -1.26
COL4A3BP-206ENST00000508809 STARD10Q9Y365 291 aa7.17□□□□□ -1.26
COL4A3BP-206ENST00000508809 IGHV3OR16-10A0A075B7F0 116 aa7.16□□□□□ -1.26
COL4A3BP-206ENST00000508809 CLPSL1A2RUU4 121 aa7.16□□□□□ -1.26
COL4A3BP-206ENST00000508809 HTR3EA5X5Y0 456 aa7.16□□□□□ -1.26
COL4A3BP-206ENST00000508809 OR5F1O95221 314 aa7.16□□□□□ -1.26
COL4A3BP-206ENST00000508809 ABHD16AO95870 558 aa7.16□□□□□ -1.26
COL4A3BP-206ENST00000508809 MSR1P21757 451 aa7.16□□□□□ -1.26
COL4A3BP-206ENST00000508809 PCGF2P35227 344 aa7.16□□□□□ -1.26
COL4A3BP-206ENST00000508809 GUCA1AP43080 201 aaPredicted RBP7.16□□□□□ -1.26
COL4A3BP-206ENST00000508809 MTPNP58546 118 aa7.16□□□□□ -1.26
COL4A3BP-206ENST00000508809 MAGOHP61326 146 aaKnown RBP7.16□□□□□ -1.26
COL4A3BP-206ENST00000508809 PIN1Q13526 163 aaPredicted RBP7.16□□□□□ -1.26
COL4A3BP-206ENST00000508809 ZNF181Q2M3W8 571 aa7.16□□□□□ -1.26
COL4A3BP-206ENST00000508809 DEFB112Q30KQ8 113 aa7.16□□□□□ -1.26
COL4A3BP-206ENST00000508809 ALG10Q5BKT4 473 aa7.16□□□□□ -1.26
COL4A3BP-206ENST00000508809 INTS11Q5TA45 600 aaKnown RBP7.16□□□□□ -1.26
COL4A3BP-206ENST00000508809 OLFML2AQ68BL7 652 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms