RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 TRAPPC2LH3BP13 241 aa10.92□□□□□ -0.66
HMGCS1-205ENST00000508319 OR10H3O60404 316 aa10.92□□□□□ -0.66
HMGCS1-205ENST00000508319 ZNF12P17014 697 aa10.92□□□□□ -0.66
HMGCS1-205ENST00000508319 MSX2P35548 267 aaPredicted RBP10.92□□□□□ -0.66
HMGCS1-205ENST00000508319 CENPAP49450 140 aa10.92□□□□□ -0.66
HMGCS1-205ENST00000508319 PRSS12P56730 875 aa10.92□□□□□ -0.66
HMGCS1-205ENST00000508319 SMIM11AP58511 58 aa10.92□□□□□ -0.66
HMGCS1-205ENST00000508319 ZNF154Q13106 437 aa10.92□□□□□ -0.66
HMGCS1-205ENST00000508319 KLF17Q5JT82 389 aaPredicted RBP10.92□□□□□ -0.66
HMGCS1-205ENST00000508319 ZNF620Q6ZNG0 422 aa10.92□□□□□ -0.66
HMGCS1-205ENST00000508319 ZBTB46Q86UZ6 589 aa10.92□□□□□ -0.66
HMGCS1-205ENST00000508319 LINC00346Q8IVM7 164 aa10.92□□□□□ -0.66
HMGCS1-205ENST00000508319 PGAM4Q8N0Y7 254 aa10.92□□□□□ -0.66
HMGCS1-205ENST00000508319 BHLHE23Q8NDY6 225 aa10.92□□□□□ -0.66
HMGCS1-205ENST00000508319 OR13G1Q8NGZ3 307 aa10.92□□□□□ -0.66
HMGCS1-205ENST00000508319 OR4K13Q8NH42 304 aa10.92□□□□□ -0.66
HMGCS1-205ENST00000508319 ZNF420Q8TAQ5 688 aaPredicted RBP10.92□□□□□ -0.66
HMGCS1-205ENST00000508319 POP5Q969H6 163 aaKnown RBP10.92□□□□□ -0.66
HMGCS1-205ENST00000508319 SLC30A2Q9BRI3 323 aa10.92□□□□□ -0.66
HMGCS1-205ENST00000508319 IFT27Q9BW83 186 aa10.92□□□□□ -0.66
HMGCS1-205ENST00000508319 C1QTNF5Q9BXJ0 243 aa10.92□□□□□ -0.66
HMGCS1-205ENST00000508319 FN3KQ9H479 309 aa10.92□□□□□ -0.66
HMGCS1-205ENST00000508319 WDR76Q9H967 626 aa10.92□□□□□ -0.66
HMGCS1-205ENST00000508319 SRA1Q9HD15 236 aaKnown RBP10.92□□□□□ -0.66
HMGCS1-205ENST00000508319 PNRC2Q9NPJ4 139 aaKnown RBP10.92□□□□□ -0.66
HMGCS1-205ENST00000508319 RPRD1BQ9NQG5 326 aaKnown RBP10.92□□□□□ -0.66
HMGCS1-205ENST00000508319 CD300AQ9UGN4 299 aa10.92□□□□□ -0.66
HMGCS1-205ENST00000508319 PKD1L1Q8TDX9 2849 aa10.92□□□□□ -0.66
HMGCS1-205ENST00000508319 OR6C68A6NDL8 312 aa10.91□□□□□ -0.66
HMGCS1-205ENST00000508319 H0YL77 283 aa10.91□□□□□ -0.66
HMGCS1-205ENST00000508319 IFNL4K9M1U5 179 aa10.91□□□□□ -0.66
HMGCS1-205ENST00000508319 CYB5R3P00387 301 aaPredicted RBP10.91□□□□□ -0.66
HMGCS1-205ENST00000508319 RENP00797 406 aa10.91□□□□□ -0.66
HMGCS1-205ENST00000508319 FABP3P05413 133 aa10.91□□□□□ -0.66
HMGCS1-205ENST00000508319 ACSM4P0C7M7 580 aa10.91□□□□□ -0.66
HMGCS1-205ENST00000508319 RRM2P31350 389 aa10.91□□□□□ -0.66
HMGCS1-205ENST00000508319 GSSP48637 474 aa10.91□□□□□ -0.66
HMGCS1-205ENST00000508319 UBA52P62987 128 aaKnown RBP10.91□□□□□ -0.66
HMGCS1-205ENST00000508319 ARMCX4Q5H9R4 360 aa10.91□□□□□ -0.66
HMGCS1-205ENST00000508319 SAMD4BQ5PRF9 694 aaKnown RBP10.91□□□□□ -0.66
HMGCS1-205ENST00000508319 SLC27A4Q6P1M0 643 aa10.91□□□□□ -0.66
HMGCS1-205ENST00000508319 PGBD2Q6P3X8 592 aa10.91□□□□□ -0.66
HMGCS1-205ENST00000508319 MUC20Q8N307 709 aaPredicted RBP10.91□□□□□ -0.66
HMGCS1-205ENST00000508319 ATG16L2Q8NAA4 619 aa10.91□□□□□ -0.66
HMGCS1-205ENST00000508319 SDR9C7Q8NEX9 313 aa10.91□□□□□ -0.66
HMGCS1-205ENST00000508319 GCDHQ92947 438 aaPredicted RBP10.91□□□□□ -0.66
HMGCS1-205ENST00000508319 ZNF582Q96NG8 517 aaPredicted RBP10.91□□□□□ -0.66
HMGCS1-205ENST00000508319 MRPL22Q9NWU5 206 aaKnown RBP10.91□□□□□ -0.66
HMGCS1-205ENST00000508319 CYB5R1Q9UHQ9 305 aa10.91□□□□□ -0.66
HMGCS1-205ENST00000508319 BOLA1Q9Y3E2 137 aa10.91□□□□□ -0.66
HMGCS1-205ENST00000508319 INSIG2Q9Y5U4 225 aa10.91□□□□□ -0.66
HMGCS1-205ENST00000508319 AUP1Q9Y679 476 aa10.91□□□□□ -0.66
HMGCS1-205ENST00000508319 TRRAPQ9Y4A5 3859 aa10.9□□□□□ -0.66
HMGCS1-205ENST00000508319 F5H5P2 479 aa10.9□□□□□ -0.66
HMGCS1-205ENST00000508319 ZNF205O95201 554 aa10.9□□□□□ -0.66
HMGCS1-205ENST00000508319 SELEP16581 610 aa10.9□□□□□ -0.66
HMGCS1-205ENST00000508319 FPR2P25090 351 aa10.9□□□□□ -0.66
HMGCS1-205ENST00000508319 NOS3P29474 1203 aa10.9□□□□□ -0.66
HMGCS1-205ENST00000508319 GGT2P36268 569 aa10.9□□□□□ -0.66
HMGCS1-205ENST00000508319 GATA4P43694 442 aa10.9□□□□□ -0.66
HMGCS1-205ENST00000508319 SRP9P49458 86 aaKnown RBP10.9□□□□□ -0.66
HMGCS1-205ENST00000508319 PAX2Q02962 417 aa10.9□□□□□ -0.66
HMGCS1-205ENST00000508319 TSPAN31Q12999 210 aa10.9□□□□□ -0.66
HMGCS1-205ENST00000508319 GK2Q14410 553 aaPredicted RBP10.9□□□□□ -0.66
HMGCS1-205ENST00000508319 ZNF181Q2M3W8 571 aa10.9□□□□□ -0.66
HMGCS1-205ENST00000508319 ESCO2Q56NI9 601 aa10.9□□□□□ -0.66
HMGCS1-205ENST00000508319 MOGAT3Q86VF5 341 aa10.9□□□□□ -0.66
HMGCS1-205ENST00000508319 MCUR1Q96AQ8 359 aa10.9□□□□□ -0.66
HMGCS1-205ENST00000508319 DACT3Q96B18 629 aaPredicted RBP10.9□□□□□ -0.66
HMGCS1-205ENST00000508319 NSMCE2Q96MF7 247 aa10.9□□□□□ -0.66
HMGCS1-205ENST00000508319 PITX2Q99697 317 aa10.9□□□□□ -0.66
HMGCS1-205ENST00000508319 ATF6BQ99941 703 aa10.9□□□□□ -0.66
HMGCS1-205ENST00000508319 PLA2G12AQ9BZM1 189 aa10.9□□□□□ -0.66
HMGCS1-205ENST00000508319 NSRP1Q9H0G5 558 aaKnown RBP10.9□□□□□ -0.66
HMGCS1-205ENST00000508319 NTN4Q9HB63 628 aa10.9□□□□□ -0.66
HMGCS1-205ENST00000508319 TMEM165Q9HC07 324 aa10.9□□□□□ -0.66
HMGCS1-205ENST00000508319 IL1RAPQ9NPH3 570 aa10.9□□□□□ -0.66
HMGCS1-205ENST00000508319 ARL8BQ9NVJ2 186 aa10.9□□□□□ -0.66
HMGCS1-205ENST00000508319 ZNF69Q9UC07 566 aa10.9□□□□□ -0.66
HMGCS1-205ENST00000508319 NUP50Q9UKX7 468 aa10.9□□□□□ -0.66
HMGCS1-205ENST00000508319 LRCH1Q9Y2L9 728 aa10.9□□□□□ -0.66
HMGCS1-205ENST00000508319 PPIAL4AQ9Y536 164 aa10.9□□□□□ -0.66
HMGCS1-205ENST00000508319 MEGF8Q7Z7M0 2845 aa10.9□□□□□ -0.66
HMGCS1-205ENST00000508319 IGHV3-64DA0A0J9YX35 117 aa10.89□□□□□ -0.67
HMGCS1-205ENST00000508319 F5H5K5 113 aa10.89□□□□□ -0.67
HMGCS1-205ENST00000508319 IDH3BO43837 385 aa10.89□□□□□ -0.67
HMGCS1-205ENST00000508319 FSTL3O95633 263 aa10.89□□□□□ -0.67
HMGCS1-205ENST00000508319 HLA-DPB1P04440 258 aa10.89□□□□□ -0.67
HMGCS1-205ENST00000508319 WNT2P09544 360 aa10.89□□□□□ -0.67
HMGCS1-205ENST00000508319 RPS2P15880 293 aaKnown RBP10.89□□□□□ -0.67
HMGCS1-205ENST00000508319 ANOS1P23352 680 aa10.89□□□□□ -0.67
HMGCS1-205ENST00000508319 IFNGR2P38484 337 aa10.89□□□□□ -0.67
HMGCS1-205ENST00000508319 RPS27P42677 84 aaKnown RBP10.89□□□□□ -0.67
HMGCS1-205ENST00000508319 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.89□□□□□ -0.67
HMGCS1-205ENST00000508319 TRAP1Q12931 704 aaKnown RBP10.89□□□□□ -0.67
HMGCS1-205ENST00000508319 ECH1Q13011 328 aa10.89□□□□□ -0.67
HMGCS1-205ENST00000508319 SLC36A3Q495N2 470 aa10.89□□□□□ -0.67
HMGCS1-205ENST00000508319 AWAT1Q58HT5 328 aa10.89□□□□□ -0.67
HMGCS1-205ENST00000508319 NAA40Q86UY6 237 aa10.89□□□□□ -0.67
HMGCS1-205ENST00000508319 SIGLECL1Q8N7X8 197 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms