RNA–Protein interactions for RNA: ENST00000507009.5

GYPB-208, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 388 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-208ENST00000507009 STX18Q9P2W9 335 aaKnown RBP4.78□□□□□ -1.64
GYPB-208ENST00000507009 CORO2BQ9UQ03 480 aa4.78□□□□□ -1.64
GYPB-208ENST00000507009 POLR1DQ9Y2S0 133 aa4.78□□□□□ -1.64
GYPB-208ENST00000507009 SIGLEC9Q9Y336 463 aa4.78□□□□□ -1.64
GYPB-208ENST00000507009 SH3GLB1Q9Y371 365 aa4.78□□□□□ -1.64
GYPB-208ENST00000507009 FAM96BQ9Y3D0 163 aa4.78□□□□□ -1.64
GYPB-208ENST00000507009 POMT1Q9Y6A1 747 aa4.78□□□□□ -1.64
GYPB-208ENST00000507009 USH1CQ9Y6N9 552 aa4.78□□□□□ -1.64
GYPB-208ENST00000507009 TRAV27A0A087WT01 109 aa4.77□□□□□ -1.65
GYPB-208ENST00000507009 TMEM120BA0PK00 339 aa4.77□□□□□ -1.65
GYPB-208ENST00000507009 ANKRD61A6NGH8 418 aa4.77□□□□□ -1.65
GYPB-208ENST00000507009 CENPBD1B2RD01 187 aa4.77□□□□□ -1.65
GYPB-208ENST00000507009 PHYHO14832 338 aa4.77□□□□□ -1.65
GYPB-208ENST00000507009 TNFRSF13BO14836 293 aaPredicted RBP4.77□□□□□ -1.65
GYPB-208ENST00000507009 MLNRO43193 412 aa4.77□□□□□ -1.65
GYPB-208ENST00000507009 ADAM20O43506 726 aa4.77□□□□□ -1.65
GYPB-208ENST00000507009 FAM20BO75063 409 aa4.77□□□□□ -1.65
GYPB-208ENST00000507009 SNNO75324 88 aaPredicted RBP4.77□□□□□ -1.65
GYPB-208ENST00000507009 CLPXO76031 633 aa4.77□□□□□ -1.65
GYPB-208ENST00000507009 RPLP1P05386 114 aaKnown RBP4.77□□□□□ -1.65
GYPB-208ENST00000507009 NR2C1P13056 603 aa4.77□□□□□ -1.65
GYPB-208ENST00000507009 IFI30P13284 250 aa4.77□□□□□ -1.65
GYPB-208ENST00000507009 GPX2P18283 190 aa4.77□□□□□ -1.65
GYPB-208ENST00000507009 FPR3P25089 353 aa4.77□□□□□ -1.65
GYPB-208ENST00000507009 RPL4P36578 427 aaKnown RBP4.77□□□□□ -1.65
GYPB-208ENST00000507009 PMELP40967 661 aa4.77□□□□□ -1.65
GYPB-208ENST00000507009 OR1E2P47887 323 aa4.77□□□□□ -1.65
GYPB-208ENST00000507009 ZNF133P52736 654 aaPredicted RBP4.77□□□□□ -1.65
GYPB-208ENST00000507009 GP2P55259 537 aaKnown RBP4.77□□□□□ -1.65
GYPB-208ENST00000507009 DLX1P56177 255 aa4.77□□□□□ -1.65
GYPB-208ENST00000507009 SCRN3Q0VDG4 424 aa4.77□□□□□ -1.65
GYPB-208ENST00000507009 DBPQ10586 325 aaPredicted RBP4.77□□□□□ -1.65
GYPB-208ENST00000507009 PIN1Q13526 163 aaPredicted RBP4.77□□□□□ -1.65
GYPB-208ENST00000507009 OR8B8Q15620 311 aa4.77□□□□□ -1.65
GYPB-208ENST00000507009 GDPGP1Q6ZNW5 385 aa4.77□□□□□ -1.65
GYPB-208ENST00000507009 DCDC5Q6ZRR9 648 aa4.77□□□□□ -1.65
GYPB-208ENST00000507009 C1orf122Q6ZSJ8 110 aa4.77□□□□□ -1.65
GYPB-208ENST00000507009 Q6ZTK2 550 aa4.77□□□□□ -1.65
GYPB-208ENST00000507009 DHDDSQ86SQ9 333 aa4.77□□□□□ -1.65
GYPB-208ENST00000507009 ZDHHC13Q8IUH4 622 aa4.77□□□□□ -1.65
GYPB-208ENST00000507009 TMEM86BQ8N661 226 aa4.77□□□□□ -1.65
GYPB-208ENST00000507009 OR8G5Q8NG78 346 aa4.77□□□□□ -1.65
GYPB-208ENST00000507009 OR11L1Q8NGX0 322 aa4.77□□□□□ -1.65
GYPB-208ENST00000507009 OR13G1Q8NGZ3 307 aa4.77□□□□□ -1.65
GYPB-208ENST00000507009 ST8SIA4Q92187 359 aa4.77□□□□□ -1.65
GYPB-208ENST00000507009 DACT3Q96B18 629 aaPredicted RBP4.77□□□□□ -1.65
GYPB-208ENST00000507009 TAMM41Q96BW9 452 aa4.77□□□□□ -1.65
GYPB-208ENST00000507009 NMD3Q96D46 503 aaKnown RBP4.77□□□□□ -1.65
GYPB-208ENST00000507009 FAM46AQ96IP4 442 aaKnown RBP4.77□□□□□ -1.65
GYPB-208ENST00000507009 SEPHS2Q99611 448 aa4.77□□□□□ -1.65
GYPB-208ENST00000507009 TMEM109Q9BVC6 243 aa4.77□□□□□ -1.65
GYPB-208ENST00000507009 PPA2Q9H2U2 334 aa4.77□□□□□ -1.65
GYPB-208ENST00000507009 DPAGT1Q9H3H5 408 aa4.77□□□□□ -1.65
GYPB-208ENST00000507009 PRDM13Q9H4Q3 707 aa4.77□□□□□ -1.65
GYPB-208ENST00000507009 TMEM100Q9NV29 134 aa4.77□□□□□ -1.65
GYPB-208ENST00000507009 TBCCD1Q9NVR7 557 aa4.77□□□□□ -1.65
GYPB-208ENST00000507009 NKIRAS1Q9NYS0 192 aa4.77□□□□□ -1.65
GYPB-208ENST00000507009 ERVK-18Q9QC07 812 aa4.77□□□□□ -1.65
GYPB-208ENST00000507009 ONECUT1Q9UBC0 465 aa4.77□□□□□ -1.65
GYPB-208ENST00000507009 CTSZQ9UBR2 303 aa4.77□□□□□ -1.65
GYPB-208ENST00000507009 RIMS3Q9UJD0 308 aa4.77□□□□□ -1.65
GYPB-208ENST00000507009 MED31Q9Y3C7 131 aa4.77□□□□□ -1.65
GYPB-208ENST00000507009 IGHV3OR15-7A0A075B7D8 119 aa4.76□□□□□ -1.65
GYPB-208ENST00000507009 TRBV5-3A0A0A0MS03 114 aa4.76□□□□□ -1.65
GYPB-208ENST00000507009 A6NIZ1 184 aa4.76□□□□□ -1.65
GYPB-208ENST00000507009 XKRYO14609 159 aa4.76□□□□□ -1.65
GYPB-208ENST00000507009 OR10H3O60404 316 aa4.76□□□□□ -1.65
GYPB-208ENST00000507009 SLC16A7O60669 478 aa4.76□□□□□ -1.65
GYPB-208ENST00000507009 GYPAP02724 150 aa4.76□□□□□ -1.65
GYPB-208ENST00000507009 COX5BP10606 129 aa4.76□□□□□ -1.65
GYPB-208ENST00000507009 RAC2P15153 192 aa4.76□□□□□ -1.65
GYPB-208ENST00000507009 RBM34P42696 430 aaKnown RBP4.76□□□□□ -1.65
GYPB-208ENST00000507009 IER3P46695 156 aa4.76□□□□□ -1.65
GYPB-208ENST00000507009 YAP1P46937 504 aaKnown RBP4.76□□□□□ -1.65
GYPB-208ENST00000507009 SLC9A3P48764 834 aa4.76□□□□□ -1.65
GYPB-208ENST00000507009 BPIFB3P59826 476 aa4.76□□□□□ -1.65
GYPB-208ENST00000507009 RAP1BP61224 184 aa4.76□□□□□ -1.65
GYPB-208ENST00000507009 RAP1AP62834 184 aa4.76□□□□□ -1.65
GYPB-208ENST00000507009 KLRD1Q13241 179 aa4.76□□□□□ -1.65
GYPB-208ENST00000507009 NFYCQ13952 458 aa4.76□□□□□ -1.65
GYPB-208ENST00000507009 OR8G1Q15617 311 aa4.76□□□□□ -1.65
GYPB-208ENST00000507009 MPPED2Q15777 294 aa4.76□□□□□ -1.65
GYPB-208ENST00000507009 LY6EQ16553 131 aa4.76□□□□□ -1.65
GYPB-208ENST00000507009 NSUN5P1Q3KNT7 163 aa4.76□□□□□ -1.65
GYPB-208ENST00000507009 BEND6Q5SZJ8 279 aaPredicted RBP4.76□□□□□ -1.65
GYPB-208ENST00000507009 INTS11Q5TA45 600 aaKnown RBP4.76□□□□□ -1.65
GYPB-208ENST00000507009 ZBTB37Q5TC79 503 aa4.76□□□□□ -1.65
GYPB-208ENST00000507009 CD276Q5ZPR3 534 aa4.76□□□□□ -1.65
GYPB-208ENST00000507009 EPGNQ6UW88 154 aa4.76□□□□□ -1.65
GYPB-208ENST00000507009 ZNF841Q6ZN19 808 aa4.76□□□□□ -1.65
GYPB-208ENST00000507009 VMO1Q7Z5L0 202 aa4.76□□□□□ -1.65
GYPB-208ENST00000507009 PATL1Q86TB9 770 aaKnown RBP4.76□□□□□ -1.65
GYPB-208ENST00000507009 FGFRL1Q8N441 504 aa4.76□□□□□ -1.65
GYPB-208ENST00000507009 LNX2Q8N448 690 aa4.76□□□□□ -1.65
GYPB-208ENST00000507009 PNKDQ8N490 385 aa4.76□□□□□ -1.65
GYPB-208ENST00000507009 PNLDC1Q8NA58 520 aaKnown RBP4.76□□□□□ -1.65
GYPB-208ENST00000507009 ZSCAN4Q8NAM6 433 aaPredicted RBP4.76□□□□□ -1.65
GYPB-208ENST00000507009 OR5L1Q8NGL2 311 aa4.76□□□□□ -1.65
GYPB-208ENST00000507009 OR13C2Q8NGS9 318 aa4.76□□□□□ -1.65
GYPB-208ENST00000507009 OR10A6Q8NH74 314 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms