RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 SLAMF6Q96DU3 332 aa7.31□□□□□ -1.24
PDGFC-205ENST00000506880 LURAP1Q96LR2 239 aa7.31□□□□□ -1.24
PDGFC-205ENST00000506880 ZNF582Q96NG8 517 aaPredicted RBP7.31□□□□□ -1.24
PDGFC-205ENST00000506880 TSSK2Q96PF2 358 aa7.31□□□□□ -1.24
PDGFC-205ENST00000506880 FOXC2Q99958 501 aa7.31□□□□□ -1.24
PDGFC-205ENST00000506880 YTHDF1Q9BYJ9 559 aaKnown RBP7.31□□□□□ -1.24
PDGFC-205ENST00000506880 ANKRD60Q9BZ19 345 aa7.31□□□□□ -1.24
PDGFC-205ENST00000506880 RERGLQ9H628 205 aa7.31□□□□□ -1.24
PDGFC-205ENST00000506880 PNRC2Q9NPJ4 139 aaKnown RBP7.31□□□□□ -1.24
PDGFC-205ENST00000506880 ST6GALNAC2Q9UJ37 374 aa7.31□□□□□ -1.24
PDGFC-205ENST00000506880 BLOC1S6Q9UL45 172 aa7.31□□□□□ -1.24
PDGFC-205ENST00000506880 ZDHHC8Q9ULC8 765 aa7.31□□□□□ -1.24
PDGFC-205ENST00000506880 EXOGQ9Y2C4 368 aaKnown RBP7.31□□□□□ -1.24
PDGFC-205ENST00000506880 PRRC2AP48634 2157 aaKnown RBP7.3□□□□□ -1.24
PDGFC-205ENST00000506880 MYO9AB2RTY4 2548 aa7.3□□□□□ -1.24
PDGFC-205ENST00000506880 USF3Q68DE3 2245 aa7.3□□□□□ -1.24
PDGFC-205ENST00000506880 A0A1B0GWJ7 208 aa7.3□□□□□ -1.24
PDGFC-205ENST00000506880 C5orf49A4QMS7 147 aa7.3□□□□□ -1.24
PDGFC-205ENST00000506880 ZNF503-AS2A6NEH8 195 aa7.3□□□□□ -1.24
PDGFC-205ENST00000506880 FAM183AA6NL82 134 aa7.3□□□□□ -1.24
PDGFC-205ENST00000506880 M0R135 149 aa7.3□□□□□ -1.24
PDGFC-205ENST00000506880 RER1O15258 196 aa7.3□□□□□ -1.24
PDGFC-205ENST00000506880 SMPD2O60906 423 aa7.3□□□□□ -1.24
PDGFC-205ENST00000506880 FSTL3O95633 263 aa7.3□□□□□ -1.24
PDGFC-205ENST00000506880 IGHA1P01876 353 aa7.3□□□□□ -1.24
PDGFC-205ENST00000506880 SPARCP09486 303 aa7.3□□□□□ -1.24
PDGFC-205ENST00000506880 ACSM4P0C7M7 580 aa7.3□□□□□ -1.24
PDGFC-205ENST00000506880 APEX1P27695 318 aaKnown RBP7.3□□□□□ -1.24
PDGFC-205ENST00000506880 HSD11B1P28845 292 aa7.3□□□□□ -1.24
PDGFC-205ENST00000506880 GCH1P30793 250 aa7.3□□□□□ -1.24
PDGFC-205ENST00000506880 PYCR1P32322 319 aa7.3□□□□□ -1.24
PDGFC-205ENST00000506880 ATP6V1E1P36543 226 aa7.3□□□□□ -1.24
PDGFC-205ENST00000506880 FABP6P51161 128 aa7.3□□□□□ -1.24
PDGFC-205ENST00000506880 RIDAP52758 137 aaKnown RBP7.3□□□□□ -1.24
PDGFC-205ENST00000506880 KLF3P57682 345 aaPredicted RBP7.3□□□□□ -1.24
PDGFC-205ENST00000506880 PSMA6P60900 246 aaKnown RBP7.3□□□□□ -1.24
PDGFC-205ENST00000506880 ISL1P61371 349 aa7.3□□□□□ -1.24
PDGFC-205ENST00000506880 HGFACQ04756 655 aa7.3□□□□□ -1.24
PDGFC-205ENST00000506880 PIGFQ07326 219 aa7.3□□□□□ -1.24
PDGFC-205ENST00000506880 SNTB2Q13425 540 aaKnown RBP7.3□□□□□ -1.24
PDGFC-205ENST00000506880 EIF2B1Q14232 305 aaKnown RBP7.3□□□□□ -1.24
PDGFC-205ENST00000506880 MAD2L1BPQ15013 274 aaPredicted RBP7.3□□□□□ -1.24
PDGFC-205ENST00000506880 TAF13Q15543 124 aa7.3□□□□□ -1.24
PDGFC-205ENST00000506880 SWI5Q1ZZU3 235 aa7.3□□□□□ -1.24
PDGFC-205ENST00000506880 SHEQ5VZ18 495 aa7.3□□□□□ -1.24
PDGFC-205ENST00000506880 ZNF774Q6NX45 483 aa7.3□□□□□ -1.24
PDGFC-205ENST00000506880 FDX2Q6P4F2 183 aa7.3□□□□□ -1.24
PDGFC-205ENST00000506880 ENTHD1Q8IYW4 607 aa7.3□□□□□ -1.24
PDGFC-205ENST00000506880 CELF2-AS1Q8N7Q2 184 aa7.3□□□□□ -1.24
PDGFC-205ENST00000506880 SPERTQ8NA61 448 aa7.3□□□□□ -1.24
PDGFC-205ENST00000506880 ZNF511Q8NB15 262 aa7.3□□□□□ -1.24
PDGFC-205ENST00000506880 PLPP7Q8NBV4 271 aa7.3□□□□□ -1.24
PDGFC-205ENST00000506880 SYNPRQ8TBG9 265 aa7.3□□□□□ -1.24
PDGFC-205ENST00000506880 SNX33Q8WV41 574 aa7.3□□□□□ -1.24
PDGFC-205ENST00000506880 THRSPQ92748 146 aa7.3□□□□□ -1.24
PDGFC-205ENST00000506880 SPSB4Q96A44 273 aa7.3□□□□□ -1.24
PDGFC-205ENST00000506880 ZNF799Q96GE5 643 aa7.3□□□□□ -1.24
PDGFC-205ENST00000506880 ZNF184Q99676 751 aaPredicted RBP7.3□□□□□ -1.24
PDGFC-205ENST00000506880 DOK1Q99704 481 aa7.3□□□□□ -1.24
PDGFC-205ENST00000506880 COPS4Q9BT78 406 aa7.3□□□□□ -1.24
PDGFC-205ENST00000506880 TRAF4Q9BUZ4 470 aaPredicted RBP7.3□□□□□ -1.24
PDGFC-205ENST00000506880 ABHD6Q9BV23 337 aa7.3□□□□□ -1.24
PDGFC-205ENST00000506880 HCAR1Q9BXC0 346 aa7.3□□□□□ -1.24
PDGFC-205ENST00000506880 CXXC4Q9H2H0 198 aa7.3□□□□□ -1.24
PDGFC-205ENST00000506880 ADGRL4Q9HBW9 690 aa7.3□□□□□ -1.24
PDGFC-205ENST00000506880 FGF20Q9NP95 211 aaPredicted RBP7.3□□□□□ -1.24
PDGFC-205ENST00000506880 EMC7Q9NPA0 242 aa7.3□□□□□ -1.24
PDGFC-205ENST00000506880 ATP23Q9Y6H3 246 aa7.3□□□□□ -1.24
PDGFC-205ENST00000506880 LOC100509620A0A075B734 347 aa7.29□□□□□ -1.24
PDGFC-205ENST00000506880 NBPF19A0A087WUL8 3843 aa7.29□□□□□ -1.24
PDGFC-205ENST00000506880 E7EQL1 145 aa7.29□□□□□ -1.24
PDGFC-205ENST00000506880 ATP6V1G2-DDX39BF2Z307 99 aa7.29□□□□□ -1.24
PDGFC-205ENST00000506880 J3QRE1 110 aa7.29□□□□□ -1.24
PDGFC-205ENST00000506880 M0R233 179 aa7.29□□□□□ -1.24
PDGFC-205ENST00000506880 NDUFS8O00217 210 aa7.29□□□□□ -1.24
PDGFC-205ENST00000506880 MTRF1O75570 445 aaKnown RBP7.29□□□□□ -1.24
PDGFC-205ENST00000506880 SEC14L2O76054 403 aa7.29□□□□□ -1.24
PDGFC-205ENST00000506880 KRT8P05787 483 aa7.29□□□□□ -1.24
PDGFC-205ENST00000506880 H2BFMP0C1H6 154 aa7.29□□□□□ -1.24
PDGFC-205ENST00000506880 DBTP11182 482 aaKnown RBP7.29□□□□□ -1.24
PDGFC-205ENST00000506880 MYF6P23409 242 aa7.29□□□□□ -1.24
PDGFC-205ENST00000506880 CALCRP30988 508 aa7.29□□□□□ -1.24
PDGFC-205ENST00000506880 POLR2IP36954 125 aaKnown RBP7.29□□□□□ -1.24
PDGFC-205ENST00000506880 RANBP1P43487 201 aa7.29□□□□□ -1.24
PDGFC-205ENST00000506880 PPP1CBP62140 327 aa7.29□□□□□ -1.24
PDGFC-205ENST00000506880 ADIPOQQ15848 244 aa7.29□□□□□ -1.24
PDGFC-205ENST00000506880 CCDC58Q4VC31 144 aa7.29□□□□□ -1.24
PDGFC-205ENST00000506880 C11orf71Q6IPW1 123 aa7.29□□□□□ -1.24
PDGFC-205ENST00000506880 UGT2A3Q6UWM9 527 aa7.29□□□□□ -1.24
PDGFC-205ENST00000506880 CFAP77Q6ZQR2 320 aa7.29□□□□□ -1.24
PDGFC-205ENST00000506880 Q6ZSR3 168 aa7.29□□□□□ -1.24
PDGFC-205ENST00000506880 FAM220AQ7Z4H9 259 aa7.29□□□□□ -1.24
PDGFC-205ENST00000506880 KRT77Q7Z794 578 aa7.29□□□□□ -1.24
PDGFC-205ENST00000506880 CDH24Q86UP0 819 aa7.29□□□□□ -1.24
PDGFC-205ENST00000506880 SLC35F2Q8IXU6 374 aa7.29□□□□□ -1.24
PDGFC-205ENST00000506880 GALNT4Q8N4A0 578 aa7.29□□□□□ -1.24
PDGFC-205ENST00000506880 ZNF540Q8NDQ6 660 aa7.29□□□□□ -1.24
PDGFC-205ENST00000506880 CSNK2A3Q8NEV1 391 aa7.29□□□□□ -1.24
PDGFC-205ENST00000506880 KBTBD8Q8NFY9 601 aa7.29□□□□□ -1.24
PDGFC-205ENST00000506880 LILRB1Q8NHL6 650 aaPredicted RBP7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms