RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 TAF9BQ9HBM6 251 aa15.31■□□□□ 0.04
SQSTM1-211ENST00000506690 DNAJB11Q9UBS4 358 aa15.31■□□□□ 0.04
SQSTM1-211ENST00000506690 RAB22AQ9UL26 194 aa15.31■□□□□ 0.04
SQSTM1-211ENST00000506690 C7orf77A4D0Y5 90 aa15.31■□□□□ 0.04
SQSTM1-211ENST00000506690 RABIFP47224 123 aa15.31■□□□□ 0.04
SQSTM1-211ENST00000506690 AWAT1Q58HT5 328 aa15.31■□□□□ 0.04
SQSTM1-211ENST00000506690 RPL7L1Q6DKI1 246 aaKnown RBP15.31■□□□□ 0.04
SQSTM1-211ENST00000506690 ANGPTL5Q86XS5 388 aa15.31■□□□□ 0.04
SQSTM1-211ENST00000506690 SECTM1Q8WVN6 248 aa15.31■□□□□ 0.04
SQSTM1-211ENST00000506690 RSRP1Q9BUV0 290 aa15.31■□□□□ 0.04
SQSTM1-211ENST00000506690 TBC1D29Q9UFV1 150 aa15.31■□□□□ 0.04
SQSTM1-211ENST00000506690 B9D1Q9UPM9 204 aa15.31■□□□□ 0.04
SQSTM1-211ENST00000506690 A0A1W2PPH5 198 aa15.3■□□□□ 0.04
SQSTM1-211ENST00000506690 H0YGG7 62 aa15.3■□□□□ 0.04
SQSTM1-211ENST00000506690 HRKO00198 91 aa15.3■□□□□ 0.04
SQSTM1-211ENST00000506690 ADAP1O75689 374 aa15.3■□□□□ 0.04
SQSTM1-211ENST00000506690 IFNA6P05013 189 aa15.3■□□□□ 0.04
SQSTM1-211ENST00000506690 LAP3P28838 519 aa15.3■□□□□ 0.04
SQSTM1-211ENST00000506690 ARF3P61204 181 aaPredicted RBP15.3■□□□□ 0.04
SQSTM1-211ENST00000506690 CCINQ13939 588 aa15.3■□□□□ 0.04
SQSTM1-211ENST00000506690 KIR2DS3Q14952 304 aa15.3■□□□□ 0.04
SQSTM1-211ENST00000506690 OR2B11Q5JQS5 317 aa15.3■□□□□ 0.04
SQSTM1-211ENST00000506690 SLC18B1Q6NT16 456 aa15.3■□□□□ 0.04
SQSTM1-211ENST00000506690 FIGLAQ6QHK4 219 aa15.3■□□□□ 0.04
SQSTM1-211ENST00000506690 ZNF440Q8IYI8 595 aa15.3■□□□□ 0.04
SQSTM1-211ENST00000506690 DTWD2Q8NBA8 298 aa15.3■□□□□ 0.04
SQSTM1-211ENST00000506690 ISOC2Q96AB3 205 aa15.3■□□□□ 0.04
SQSTM1-211ENST00000506690 IL23AQ9NPF7 189 aa15.3■□□□□ 0.04
SQSTM1-211ENST00000506690 PLA2G2EQ9NZK7 142 aa15.3■□□□□ 0.04
SQSTM1-211ENST00000506690 TAAR5O14804 337 aa15.29■□□□□ 0.04
SQSTM1-211ENST00000506690 HTR5AP47898 357 aa15.29■□□□□ 0.04
SQSTM1-211ENST00000506690 TMEM230Q96A57 120 aa15.29■□□□□ 0.04
SQSTM1-211ENST00000506690 C8orf44Q96CB5 159 aa15.29■□□□□ 0.04
SQSTM1-211ENST00000506690 IP6K3Q96PC2 410 aa15.29■□□□□ 0.04
SQSTM1-211ENST00000506690 GGACTQ9BVM4 153 aa15.29■□□□□ 0.04
SQSTM1-211ENST00000506690 SERGEFQ9UGK8 458 aa15.29■□□□□ 0.04
SQSTM1-211ENST00000506690 K7EQS6 105 aa15.29■□□□□ 0.04
SQSTM1-211ENST00000506690 HLA-DQA2P01906 255 aa15.29■□□□□ 0.04
SQSTM1-211ENST00000506690 ID4P47928 161 aa15.29■□□□□ 0.04
SQSTM1-211ENST00000506690 DNASE1L1P49184 302 aa15.29■□□□□ 0.04
SQSTM1-211ENST00000506690 KRBOX4Q5JUW0 171 aa15.29■□□□□ 0.04
SQSTM1-211ENST00000506690 TMEM268Q5VZI3 342 aa15.29■□□□□ 0.04
SQSTM1-211ENST00000506690 MDGA2Q7Z553 956 aa15.29■□□□□ 0.04
SQSTM1-211ENST00000506690 RSC1A1Q92681 617 aa15.29■□□□□ 0.04
SQSTM1-211ENST00000506690 KTI12Q96EK9 354 aaPredicted RBP15.29■□□□□ 0.04
SQSTM1-211ENST00000506690 ZFYVE21Q9BQ24 234 aa15.29■□□□□ 0.04
SQSTM1-211ENST00000506690 TWSG1Q9GZX9 223 aa15.29■□□□□ 0.04
SQSTM1-211ENST00000506690 Q9N2J8 555 aa15.29■□□□□ 0.04
SQSTM1-211ENST00000506690 hCG_1809904A0A1W2PP81 198 aa15.28■□□□□ 0.04
SQSTM1-211ENST00000506690 A0A1W2PR64 198 aa15.28■□□□□ 0.04
SQSTM1-211ENST00000506690 A0A1W2PRV1 198 aa15.28■□□□□ 0.04
SQSTM1-211ENST00000506690 SFT2D2O95562 160 aa15.28■□□□□ 0.04
SQSTM1-211ENST00000506690 PMP2P02689 132 aa15.28■□□□□ 0.04
SQSTM1-211ENST00000506690 SNRNP70P08621 437 aaKnown RBP15.28■□□□□ 0.04
SQSTM1-211ENST00000506690 OR8U9P0C7N5 309 aa15.28■□□□□ 0.04
SQSTM1-211ENST00000506690 CT45A8P0DMV1 189 aa15.28■□□□□ 0.04
SQSTM1-211ENST00000506690 CT45A9P0DMV2 189 aa15.28■□□□□ 0.04
SQSTM1-211ENST00000506690 RIDAP52758 137 aaKnown RBP15.28■□□□□ 0.04
SQSTM1-211ENST00000506690 SSTP61278 116 aa15.28■□□□□ 0.04
SQSTM1-211ENST00000506690 UNC119Q13432 240 aa15.28■□□□□ 0.04
SQSTM1-211ENST00000506690 NNATQ16517 81 aa15.28■□□□□ 0.04
SQSTM1-211ENST00000506690 CT45A2Q5DJT8 189 aa15.28■□□□□ 0.04
SQSTM1-211ENST00000506690 BCORP1Q8N888 145 aa15.28■□□□□ 0.04
SQSTM1-211ENST00000506690 NKAIN3Q8N8D7 197 aa15.28■□□□□ 0.04
SQSTM1-211ENST00000506690 CHST4Q8NCG5 386 aa15.28■□□□□ 0.04
SQSTM1-211ENST00000506690 OR13C3Q8NGS6 347 aa15.28■□□□□ 0.04
SQSTM1-211ENST00000506690 OR8U1Q8NH10 309 aa15.28■□□□□ 0.04
SQSTM1-211ENST00000506690 OR51F2Q8NH61 342 aa15.28■□□□□ 0.04
SQSTM1-211ENST00000506690 FAM46BQ96A09 425 aa15.28■□□□□ 0.04
SQSTM1-211ENST00000506690 FOXN4Q96NZ1 517 aa15.28■□□□□ 0.04
SQSTM1-211ENST00000506690 ADAM19Q9H013 955 aa15.28■□□□□ 0.04
SQSTM1-211ENST00000506690 C5orf66Q9H5L9 145 aa15.28■□□□□ 0.04
SQSTM1-211ENST00000506690 MRPL22Q9NWU5 206 aaKnown RBP15.28■□□□□ 0.04
SQSTM1-211ENST00000506690 HHLA2Q9UM44 414 aa15.28■□□□□ 0.04
SQSTM1-211ENST00000506690 CEACAM18A8MTB9 384 aa15.28■□□□□ 0.04
SQSTM1-211ENST00000506690 LINC00271P0C7V0 271 aa15.28■□□□□ 0.04
SQSTM1-211ENST00000506690 GSK3AP49840 483 aa15.28■□□□□ 0.04
SQSTM1-211ENST00000506690 IL15RAQ13261 267 aa15.28■□□□□ 0.04
SQSTM1-211ENST00000506690 KCTD18Q6PI47 426 aaPredicted RBP15.28■□□□□ 0.04
SQSTM1-211ENST00000506690 CLEC18BQ6UXF7 455 aa15.28■□□□□ 0.04
SQSTM1-211ENST00000506690 CSNK1A1LQ8N752 337 aa15.28■□□□□ 0.04
SQSTM1-211ENST00000506690 TERB2Q8NHR7 220 aa15.28■□□□□ 0.04
SQSTM1-211ENST00000506690 RERGQ96A58 199 aaPredicted RBP15.28■□□□□ 0.04
SQSTM1-211ENST00000506690 ELF4Q99607 663 aaPredicted RBP15.28■□□□□ 0.04
SQSTM1-211ENST00000506690 SPSB2Q99619 263 aa15.28■□□□□ 0.04
SQSTM1-211ENST00000506690 TREM2Q9NZC2 230 aa15.28■□□□□ 0.04
SQSTM1-211ENST00000506690 DPP7Q9UHL4 492 aa15.28■□□□□ 0.04
SQSTM1-211ENST00000506690 GPR132Q9UNW8 380 aa15.28■□□□□ 0.04
SQSTM1-211ENST00000506690 STARD10Q9Y365 291 aa15.28■□□□□ 0.04
SQSTM1-211ENST00000506690 HIDE1A8MVS5 230 aa15.27■□□□□ 0.04
SQSTM1-211ENST00000506690 SRSF10O75494 262 aaKnown RBP15.27■□□□□ 0.04
SQSTM1-211ENST00000506690 SPARCP09486 303 aa15.27■□□□□ 0.04
SQSTM1-211ENST00000506690 QRFPP83859 136 aa15.27■□□□□ 0.04
SQSTM1-211ENST00000506690 RAB32Q13637 225 aa15.27■□□□□ 0.04
SQSTM1-211ENST00000506690 EBPQ15125 230 aaKnown RBP15.27■□□□□ 0.04
SQSTM1-211ENST00000506690 PLPP4Q5VZY2 271 aa15.27■□□□□ 0.04
SQSTM1-211ENST00000506690 Q6ZRG5 221 aa15.27■□□□□ 0.04
SQSTM1-211ENST00000506690 MAMDC2Q7Z304 686 aaPredicted RBP15.27■□□□□ 0.04
SQSTM1-211ENST00000506690 ZNF761Q86XN6 746 aaPredicted RBP15.27■□□□□ 0.04
SQSTM1-211ENST00000506690 OR10C1Q96KK4 312 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms