RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 SLC31A1O15431 190 aa4.03□□□□□ -1.76
HERC4-213ENST00000506515 ZNF861PO60384 105 aa4.03□□□□□ -1.76
HERC4-213ENST00000506515 STX10O60499 249 aa4.03□□□□□ -1.76
HERC4-213ENST00000506515 NPIPB7O75200 414 aa4.03□□□□□ -1.76
HERC4-213ENST00000506515 SERPINA3P01011 423 aa4.03□□□□□ -1.76
HERC4-213ENST00000506515 RBMY1DP0C7P1 496 aaKnown RBP4.03□□□□□ -1.76
HERC4-213ENST00000506515 RBMY1A1P0DJD3 496 aaKnown RBP4.03□□□□□ -1.76
HERC4-213ENST00000506515 DRD3P35462 400 aa4.03□□□□□ -1.76
HERC4-213ENST00000506515 NUP107P57740 925 aa4.03□□□□□ -1.76
HERC4-213ENST00000506515 DDX39BQ13838 428 aaKnown RBP4.03□□□□□ -1.76
HERC4-213ENST00000506515 ATP6AP1Q15904 470 aa4.03□□□□□ -1.76
HERC4-213ENST00000506515 C2orf83Q53S99 150 aa4.03□□□□□ -1.76
HERC4-213ENST00000506515 CLEC20AQ6ZU45 233 aa4.03□□□□□ -1.76
HERC4-213ENST00000506515 Q8N7P7 452 aa4.03□□□□□ -1.76
HERC4-213ENST00000506515 NECAB1Q8N987 351 aa4.03□□□□□ -1.76
HERC4-213ENST00000506515 FAM131CQ96AQ9 280 aa4.03□□□□□ -1.76
HERC4-213ENST00000506515 ITCHQ96J02 903 aa4.03□□□□□ -1.76
HERC4-213ENST00000506515 SERPINB11Q96P15 392 aa4.03□□□□□ -1.76
HERC4-213ENST00000506515 PLIN2Q99541 437 aa4.03□□□□□ -1.76
HERC4-213ENST00000506515 CALN1Q9BXU9 219 aa4.03□□□□□ -1.76
HERC4-213ENST00000506515 SLC17A9Q9BYT1 436 aa4.03□□□□□ -1.76
HERC4-213ENST00000506515 HPCAL4Q9UM19 191 aa4.03□□□□□ -1.76
HERC4-213ENST00000506515 TRPM6Q9BX84 2022 aa4.03□□□□□ -1.76
HERC4-213ENST00000506515 SVILO95425 2214 aa4.03□□□□□ -1.76
HERC4-213ENST00000506515 RP1P56715 2156 aa4.03□□□□□ -1.76
HERC4-213ENST00000506515 MED13Q9UHV7 2174 aa4.03□□□□□ -1.76
HERC4-213ENST00000506515 NBPF19A0A087WUL8 3843 aa4.03□□□□□ -1.76
HERC4-213ENST00000506515 ANKRD17O75179 2603 aaKnown RBP4.02□□□□□ -1.77
HERC4-213ENST00000506515 A0A0G2JLM5 398 aa4.02□□□□□ -1.77
HERC4-213ENST00000506515 GOLGA8IPA6NC78 632 aa4.02□□□□□ -1.77
HERC4-213ENST00000506515 GOLGA8JA6NMD2 632 aa4.02□□□□□ -1.77
HERC4-213ENST00000506515 OR52A4PA6NMU1 304 aa4.02□□□□□ -1.77
HERC4-213ENST00000506515 C10orf142B7Z368 130 aa4.02□□□□□ -1.77
HERC4-213ENST00000506515 APOEP02649 317 aa4.02□□□□□ -1.77
HERC4-213ENST00000506515 GIPP09681 153 aaPredicted RBP4.02□□□□□ -1.77
HERC4-213ENST00000506515 ABOP16442 354 aa4.02□□□□□ -1.77
HERC4-213ENST00000506515 PRDX3P30048 256 aaKnown RBP4.02□□□□□ -1.77
HERC4-213ENST00000506515 FMO3P31513 532 aa4.02□□□□□ -1.77
HERC4-213ENST00000506515 GTF2H1P32780 548 aa4.02□□□□□ -1.77
HERC4-213ENST00000506515 CSKP41240 450 aa4.02□□□□□ -1.77
HERC4-213ENST00000506515 PSMD8P48556 350 aa4.02□□□□□ -1.77
HERC4-213ENST00000506515 MYL6P60660 151 aa4.02□□□□□ -1.77
HERC4-213ENST00000506515 CKAP4Q07065 602 aaKnown RBP4.02□□□□□ -1.77
HERC4-213ENST00000506515 DAZ2Q13117 558 aaKnown RBP4.02□□□□□ -1.77
HERC4-213ENST00000506515 IGFBP7Q16270 282 aa4.02□□□□□ -1.77
HERC4-213ENST00000506515 NRF1Q16656 503 aa4.02□□□□□ -1.77
HERC4-213ENST00000506515 BOLA3Q53S33 107 aa4.02□□□□□ -1.77
HERC4-213ENST00000506515 GPR157Q5UAW9 335 aa4.02□□□□□ -1.77
HERC4-213ENST00000506515 TMEM215Q68D42 235 aa4.02□□□□□ -1.77
HERC4-213ENST00000506515 ZNF620Q6ZNG0 422 aa4.02□□□□□ -1.77
HERC4-213ENST00000506515 TGIF2LXQ8IUE1 241 aa4.02□□□□□ -1.77
HERC4-213ENST00000506515 C12orf56Q8IXR9 622 aa4.02□□□□□ -1.77
HERC4-213ENST00000506515 FNDC5Q8NAU1 212 aa4.02□□□□□ -1.77
HERC4-213ENST00000506515 SUMF2Q8NBJ7 301 aa4.02□□□□□ -1.77
HERC4-213ENST00000506515 OR5B17Q8NGF7 314 aa4.02□□□□□ -1.77
HERC4-213ENST00000506515 LMX1AQ8TE12 382 aa4.02□□□□□ -1.77
HERC4-213ENST00000506515 RDH5Q92781 318 aa4.02□□□□□ -1.77
HERC4-213ENST00000506515 PANX2Q96RD6 677 aa4.02□□□□□ -1.77
HERC4-213ENST00000506515 RASL11BQ9BPW5 248 aa4.02□□□□□ -1.77
HERC4-213ENST00000506515 ROGDIQ9GZN7 287 aa4.02□□□□□ -1.77
HERC4-213ENST00000506515 NMRAL1Q9HBL8 299 aa4.02□□□□□ -1.77
HERC4-213ENST00000506515 DAZ3Q9NR90 486 aaKnown RBP4.02□□□□□ -1.77
HERC4-213ENST00000506515 ANAPC11Q9NYG5 84 aa4.02□□□□□ -1.77
HERC4-213ENST00000506515 ZNF639Q9UID6 485 aa4.02□□□□□ -1.77
HERC4-213ENST00000506515 NPTNQ9Y639 398 aa4.02□□□□□ -1.77
HERC4-213ENST00000506515 DOCK9Q9BZ29 2069 aa4.02□□□□□ -1.77
HERC4-213ENST00000506515 RELNP78509 3460 aa4.02□□□□□ -1.77
HERC4-213ENST00000506515 ZFHX3Q15911 3703 aa4.01□□□□□ -1.77
HERC4-213ENST00000506515 FAM240BA0A1B0GVZ2 78 aa4.01□□□□□ -1.77
HERC4-213ENST00000506515 TRAF3IP2O43734 574 aaPredicted RBP4.01□□□□□ -1.77
HERC4-213ENST00000506515 TNFSF13O75888 250 aa4.01□□□□□ -1.77
HERC4-213ENST00000506515 TNFP01375 233 aa4.01□□□□□ -1.77
HERC4-213ENST00000506515 ETS2P15036 469 aa4.01□□□□□ -1.77
HERC4-213ENST00000506515 NCF2P19878 526 aaPredicted RBP4.01□□□□□ -1.77
HERC4-213ENST00000506515 TCN2P20062 427 aa4.01□□□□□ -1.77
HERC4-213ENST00000506515 CD1CP29017 333 aa4.01□□□□□ -1.77
HERC4-213ENST00000506515 CTRLP40313 264 aa4.01□□□□□ -1.77
HERC4-213ENST00000506515 DLX1P56177 255 aa4.01□□□□□ -1.77
HERC4-213ENST00000506515 CLDN6P56747 220 aa4.01□□□□□ -1.77
HERC4-213ENST00000506515 RAD51Q06609 339 aa4.01□□□□□ -1.77
HERC4-213ENST00000506515 CYP24A1Q07973 514 aa4.01□□□□□ -1.77
HERC4-213ENST00000506515 INCA1Q0VD86 236 aa4.01□□□□□ -1.77
HERC4-213ENST00000506515 SCRN3Q0VDG4 424 aa4.01□□□□□ -1.77
HERC4-213ENST00000506515 LRRC31Q6UY01 552 aa4.01□□□□□ -1.77
HERC4-213ENST00000506515 SCD5Q86SK9 330 aa4.01□□□□□ -1.77
HERC4-213ENST00000506515 ZNF546Q86UE3 836 aa4.01□□□□□ -1.77
HERC4-213ENST00000506515 PAQR7Q86WK9 346 aa4.01□□□□□ -1.77
HERC4-213ENST00000506515 STK40Q8N2I9 435 aa4.01□□□□□ -1.77
HERC4-213ENST00000506515 NT5C3BQ969T7 300 aa4.01□□□□□ -1.77
HERC4-213ENST00000506515 BTN2A3PQ96KV6 586 aa4.01□□□□□ -1.77
HERC4-213ENST00000506515 HSFY1Q96LI6 401 aa4.01□□□□□ -1.77
HERC4-213ENST00000506515 MBOAT4Q96T53 435 aa4.01□□□□□ -1.77
HERC4-213ENST00000506515 DDA1Q9BW61 102 aa4.01□□□□□ -1.77
HERC4-213ENST00000506515 SYNDIG1Q9H7V2 258 aa4.01□□□□□ -1.77
HERC4-213ENST00000506515 GIN1Q9NXP7 522 aa4.01□□□□□ -1.77
HERC4-213ENST00000506515 QPCTLQ9NXS2 382 aa4.01□□□□□ -1.77
HERC4-213ENST00000506515 PISDQ9UG56 409 aa4.01□□□□□ -1.77
HERC4-213ENST00000506515 ITPR3Q14573 2671 aa4.01□□□□□ -1.77
HERC4-213ENST00000506515 FBN2P35556 2912 aa4.01□□□□□ -1.77
HERC4-213ENST00000506515 PHF3Q92576 2039 aaKnown RBP4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms