RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 HLA-DQB1P01920 261 aa2.13□□□□□ -2.07
TOPBP1-204ENST00000505804 CD74P04233 296 aa2.13□□□□□ -2.07
TOPBP1-204ENST00000505804 ZNF688P0C7X2 276 aa2.13□□□□□ -2.07
TOPBP1-204ENST00000505804 CT45A6P0DMU7 189 aa2.13□□□□□ -2.07
TOPBP1-204ENST00000505804 CT45A5P0DMU8 189 aa2.13□□□□□ -2.07
TOPBP1-204ENST00000505804 CT45A7P0DMV0 189 aa2.13□□□□□ -2.07
TOPBP1-204ENST00000505804 EIF2S2P20042 333 aaKnown RBP2.13□□□□□ -2.07
TOPBP1-204ENST00000505804 OR1E1P30953 314 aa2.13□□□□□ -2.07
TOPBP1-204ENST00000505804 OTX1P32242 354 aaPredicted RBP2.13□□□□□ -2.07
TOPBP1-204ENST00000505804 C21orf59P57076 290 aa2.13□□□□□ -2.07
TOPBP1-204ENST00000505804 SYNJ2BPP57105 145 aa2.13□□□□□ -2.07
TOPBP1-204ENST00000505804 RGS8P57771 180 aaPredicted RBP2.13□□□□□ -2.07
TOPBP1-204ENST00000505804 TAS2R31P59538 309 aa2.13□□□□□ -2.07
TOPBP1-204ENST00000505804 CRADDP78560 199 aa2.13□□□□□ -2.07
TOPBP1-204ENST00000505804 PRR3P79522 188 aaKnown RBP2.13□□□□□ -2.07
TOPBP1-204ENST00000505804 CDK5Q00535 292 aa2.13□□□□□ -2.07
TOPBP1-204ENST00000505804 DGCR6Q14129 220 aa2.13□□□□□ -2.07
TOPBP1-204ENST00000505804 KIR2DS1Q14954 304 aa2.13□□□□□ -2.07
TOPBP1-204ENST00000505804 CT45A1Q5HYN5 189 aa2.13□□□□□ -2.07
TOPBP1-204ENST00000505804 DNLZQ5SXM8 178 aa2.13□□□□□ -2.07
TOPBP1-204ENST00000505804 PRR9Q5T870 116 aa2.13□□□□□ -2.07
TOPBP1-204ENST00000505804 AP1ARQ63HQ0 302 aa2.13□□□□□ -2.07
TOPBP1-204ENST00000505804 TTC23LQ6PF05 361 aa2.13□□□□□ -2.07
TOPBP1-204ENST00000505804 NKAIN4Q8IVV8 208 aa2.13□□□□□ -2.07
TOPBP1-204ENST00000505804 TMEM256Q8N2U0 113 aa2.13□□□□□ -2.07
TOPBP1-204ENST00000505804 CBR4Q8N4T8 237 aa2.13□□□□□ -2.07
TOPBP1-204ENST00000505804 OR11H7Q8NGC8 314 aa2.13□□□□□ -2.07
TOPBP1-204ENST00000505804 CT45A3Q8NHU0 189 aa2.13□□□□□ -2.07
TOPBP1-204ENST00000505804 FAM81AQ8TBF8 368 aa2.13□□□□□ -2.07
TOPBP1-204ENST00000505804 ZNF317Q96PQ6 595 aaPredicted RBP2.13□□□□□ -2.07
TOPBP1-204ENST00000505804 PANX1Q96RD7 426 aa2.13□□□□□ -2.07
TOPBP1-204ENST00000505804 RBBP8Q99708 897 aa2.13□□□□□ -2.07
TOPBP1-204ENST00000505804 ANKRD60Q9BZ19 345 aa2.13□□□□□ -2.07
TOPBP1-204ENST00000505804 TMEM185BQ9H7F4 350 aa2.13□□□□□ -2.07
TOPBP1-204ENST00000505804 NEK6Q9HC98 313 aa2.13□□□□□ -2.07
TOPBP1-204ENST00000505804 ZNF160Q9HCG1 818 aa2.13□□□□□ -2.07
TOPBP1-204ENST00000505804 FBXO6Q9NRD1 293 aaPredicted RBP2.13□□□□□ -2.07
TOPBP1-204ENST00000505804 MTCH1Q9NZJ7 389 aa2.13□□□□□ -2.07
TOPBP1-204ENST00000505804 RABL2BQ9UNT1 228 aa2.13□□□□□ -2.07
TOPBP1-204ENST00000505804 S4R3C0 116 aa2.13□□□□□ -2.07
TOPBP1-204ENST00000505804 SCN1AP35498 2009 aa2.12□□□□□ -2.07
TOPBP1-204ENST00000505804 A0A0J9YXV3 536 aa2.12□□□□□ -2.07
TOPBP1-204ENST00000505804 NCBP2LA6PVI3 153 aaKnown RBP2.12□□□□□ -2.07
TOPBP1-204ENST00000505804 OR2F2O95006 317 aa2.12□□□□□ -2.07
TOPBP1-204ENST00000505804 CD37P11049 281 aa2.12□□□□□ -2.07
TOPBP1-204ENST00000505804 IL32P24001 234 aa2.12□□□□□ -2.07
TOPBP1-204ENST00000505804 LOXP28300 417 aaPredicted RBP2.12□□□□□ -2.07
TOPBP1-204ENST00000505804 RBM34P42696 430 aaKnown RBP2.12□□□□□ -2.07
TOPBP1-204ENST00000505804 ZNF616Q08AN1 781 aa2.12□□□□□ -2.07
TOPBP1-204ENST00000505804 LRRC74AQ0VAA2 488 aa2.12□□□□□ -2.07
TOPBP1-204ENST00000505804 PGGHGQ32M88 737 aa2.12□□□□□ -2.07
TOPBP1-204ENST00000505804 KPRPQ5T749 579 aaPredicted RBP2.12□□□□□ -2.07
TOPBP1-204ENST00000505804 C1orf185Q5T7R7 199 aa2.12□□□□□ -2.07
TOPBP1-204ENST00000505804 MBOAT2Q6ZWT7 520 aa2.12□□□□□ -2.07
TOPBP1-204ENST00000505804 FAM71AQ8IYT1 594 aa2.12□□□□□ -2.07
TOPBP1-204ENST00000505804 SNX31Q8N9S9 440 aa2.12□□□□□ -2.07
TOPBP1-204ENST00000505804 GATSQ8NAP1 163 aa2.12□□□□□ -2.07
TOPBP1-204ENST00000505804 OR4C5Q8NGB2 326 aa2.12□□□□□ -2.07
TOPBP1-204ENST00000505804 OR51E1Q8TCB6 317 aa2.12□□□□□ -2.07
TOPBP1-204ENST00000505804 SLC25A46Q96AG3 418 aa2.12□□□□□ -2.07
TOPBP1-204ENST00000505804 DCPSQ96C86 337 aaKnown RBP2.12□□□□□ -2.07
TOPBP1-204ENST00000505804 TGS1Q96RS0 853 aaKnown RBP2.12□□□□□ -2.07
TOPBP1-204ENST00000505804 CHP1Q99653 195 aa2.12□□□□□ -2.07
TOPBP1-204ENST00000505804 TBL1YQ9BQ87 522 aa2.12□□□□□ -2.07
TOPBP1-204ENST00000505804 GGTLC1Q9BX51 225 aa2.12□□□□□ -2.07
TOPBP1-204ENST00000505804 TMEM165Q9HC07 324 aa2.12□□□□□ -2.07
TOPBP1-204ENST00000505804 C8orf17Q9NRJ1 99 aa2.12□□□□□ -2.07
TOPBP1-204ENST00000505804 AGPAT4Q9NRZ5 378 aa2.12□□□□□ -2.07
TOPBP1-204ENST00000505804 ANKRD12Q6UB98 2062 aa2.12□□□□□ -2.07
TOPBP1-204ENST00000505804 COL22A1Q8NFW1 1626 aaPredicted RBP2.12□□□□□ -2.07
TOPBP1-204ENST00000505804 SMIM26A0A096LP01 95 aa2.11□□□□□ -2.07
TOPBP1-204ENST00000505804 CTAGE15A4D2H0 777 aa2.11□□□□□ -2.07
TOPBP1-204ENST00000505804 GABRR3A8MPY1 467 aa2.11□□□□□ -2.07
TOPBP1-204ENST00000505804 PLPP1O14494 284 aa2.11□□□□□ -2.07
TOPBP1-204ENST00000505804 SLC9A3R1O14745 358 aaPredicted RBP2.11□□□□□ -2.07
TOPBP1-204ENST00000505804 CHST10O43529 356 aa2.11□□□□□ -2.07
TOPBP1-204ENST00000505804 SLC22A5O76082 557 aa2.11□□□□□ -2.07
TOPBP1-204ENST00000505804 AQP8O94778 261 aa2.11□□□□□ -2.07
TOPBP1-204ENST00000505804 CCNB2O95067 398 aa2.11□□□□□ -2.07
TOPBP1-204ENST00000505804 CDRT1O95170 752 aa2.11□□□□□ -2.07
TOPBP1-204ENST00000505804 CD160O95971 181 aa2.11□□□□□ -2.07
TOPBP1-204ENST00000505804 AGTP01019 485 aa2.11□□□□□ -2.07
TOPBP1-204ENST00000505804 CSNK2A2P19784 350 aaPredicted RBP2.11□□□□□ -2.07
TOPBP1-204ENST00000505804 UQCRFS1P47985 274 aa2.11□□□□□ -2.07
TOPBP1-204ENST00000505804 CCNG1P51959 295 aa2.11□□□□□ -2.07
TOPBP1-204ENST00000505804 PRRX1P54821 245 aa2.11□□□□□ -2.07
TOPBP1-204ENST00000505804 RPL23P62829 140 aaKnown RBP2.11□□□□□ -2.07
TOPBP1-204ENST00000505804 IDI1Q13907 227 aa2.11□□□□□ -2.07
TOPBP1-204ENST00000505804 RCN1Q15293 331 aa2.11□□□□□ -2.07
TOPBP1-204ENST00000505804 RNASE13Q5GAN3 156 aaKnown RBP2.11□□□□□ -2.07
TOPBP1-204ENST00000505804 ADNP2Q6IQ32 1131 aa2.11□□□□□ -2.07
TOPBP1-204ENST00000505804 CTAGE6Q86UF2 777 aa2.11□□□□□ -2.07
TOPBP1-204ENST00000505804 CBLN2Q8IUK8 224 aa2.11□□□□□ -2.07
TOPBP1-204ENST00000505804 GPR26Q8NDV2 337 aa2.11□□□□□ -2.07
TOPBP1-204ENST00000505804 OR9A2Q8NGT5 310 aa2.11□□□□□ -2.07
TOPBP1-204ENST00000505804 OR13G1Q8NGZ3 307 aa2.11□□□□□ -2.07
TOPBP1-204ENST00000505804 OR5K2Q8NHB8 316 aa2.11□□□□□ -2.07
TOPBP1-204ENST00000505804 PRRC1Q96M27 445 aa2.11□□□□□ -2.07
TOPBP1-204ENST00000505804 RNF145Q96MT1 663 aa2.11□□□□□ -2.07
TOPBP1-204ENST00000505804 SULT4A1Q9BR01 284 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms